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Publications

2019

Genomic insights from Monoglobus pectinilyticus: a pectin-degrading specialist bacterium in the human colon. (2019)
Kim CC, Healey GR, Kelly WJ, Patchett ML, Jordens Z, Tannock GW, Sims IM, Bell TJ, Hedderley D, Henrissat B, Rosendale DI

[ISME J] in press
Metal chelators for the inhibition of the lymphocytic choriomeningitis virus endonuclease domain (2019)
Saez-Ayala M, Laban Yekwa E, Mondielli C, Roux L, Hernandez S, Bailly F, Cotelle P, Rogolino D, Canard B, Ferron F, Alvarez K

[Antiviral Res.] 162 : 79-89
C3P3-G1: first generation of a eukaryotic artificial cytoplasmic expression system. (2019)
Jais PH, Decroly E, Jacquet E, Le Boulch M, Jais A, Jean-Jean O, Eaton H, Ponien P, Verdier F, Canard B, Goncalves S, Chiron S, Le Gall M, Mayeux P, Shmulevitz M

[Nucleic Acids Res] in press
Comparative genomics of Rhizophagus irregularis, R. cerebriforme, R. diaphanus and Gigaspora rosea highlights specific genetic features in Glomeromycotina. (2019)
Morin E, Miyauchi S, San Clemente H, Chen EC, Pelin A, de la Providencia I, Ndikumana S, Beaudet D, Hainaut M, Drula E, Kuo A, Tang N, Roy S, Viala J, Henrissat B, Grigoriev IV, Corradi N, Roux C, Martin FM

[New Phytol] in press
Approved drugs screening against the nsP1 capping enzyme of Venezuelan equine encephalitis virus using an immuno-based assay. (2019)
Ferreira-Ramos AS, Li C, Eydoux C, Contreras JM, Morice C, Querat G, Gigante A, Perez Perez MJ, Jung ML, Canard B, Guillemot JC, Decroly E, Coutard B

[Antiviral Res] in press
FTSJ3 is an RNA 2'-O-methyltransferase recruited by HIV to avoid innate immune sensing. (2019)
Ringeard M, Marchand V, Decroly E, Motorin Y, Bennasser Y

[Nature] in press

2018

Structure of the type VI secretion system TssK-TssF-TssG baseplate subcomplex revealed by cryo-electron microscopy. (2018)
Park YJ, Lacourse KD, Cambillau C, DiMaio F, Mougous JD, Veesler D

[Nat Commun] 9 : 5385
[Ebola virus L protein harbors a new enzymatic activity involved in the internal methylation of RNAs]. (2018)
Martin B, Valle C, Coutard B, Canard B, Debart F, Decroly E

[Med Sci (Paris)] 34 : 919-921
Metagenomic Assembly and Prokaryotic Metagenome-Assembled Genome Sequences from the Northern Gulf of Mexico "Dead Zone". (2018)
Thrash JC, Baker BJ, Seitz KW, Temperton B, Campbell LG, Rabalais NN, Henrissat B, Mason OU

[Microbiol Resour Announc] 7 : pii: e01033-18
Proteomic dissection of the cellulolytic machineries used by soil-dwelling Bacteroidetes (2018)
Taillefer M, Arntzen MO, Henrissat B, Pope PB, Larsbrink J

[mSystems] 3 : pii: e00240-18
Identification of Dual Receptor Binding Protein Systems in Lactococcal 936 Group Phages. (2018)
Hayes S, Duhoo Y, Neve H, Murphy J, Noben JP, Franz CMAP, Cambillau C, Mahony J, Nauta A, van Sinderen D

[Viruses] 10
Nuclear genome sequence of the plastid-lacking cryptomonad Goniomonas avonlea provides insights into the evolution of secondary plastids. (2018)
Cenci U, Sibbald SJ, Curtis BA, Kamikawa R, Eme L, Moog D, Henrissat B, Marechal E, Chabi M, Djemiel C, Roger AJ, Kim E, Archibald JM

[BMC Biol] 16 : 137
Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle. (2018)
Murat C, Payen T, Noel B, Kuo A, Morin E, Chen J, Kohler A, Krizsan K, Balestrini R, Da Silva C, Montanini B, Hainaut M, Levati E, Barry KW, Belfiori B, Cichocki N, Clum A, Dockter RB, Fauchery L, Guy J, Iotti M, Le Tacon F, Lindquist EA, Lipzen A, Malagnac F, Mello A, Molinier V, Miyauchi S, Poulain J, Riccioni C, Rubini A, Sitrit Y, Splivallo R, Traeger S, Wang M, Zifcakova L, Wipf D, Zambonelli A, Paolocci F, Nowrousian M, Ottonello S, Baldrian P, Spatafora JW, Henrissat B, Nagy LG, Aury JM, Wincker P, Grigoriev IV, Bonfante P, Martin FM

[Nat Ecol Evol] 2 : 1956-1965
The obligate alkalophilic soda-lake fungus Sodiomyces alkalinus has shifted to a protein diet. (2018)
Grum-Grzhimaylo AA, Falkoski DL, van den Heuvel J, Valero-Jimenez CA, Min B, Choi IG, Lipzen A, Daum CG, Aanen DK, Tsang A, Henrissat B, Bilanenko EN, de Vries RP, van Kan JAL, Grigoriev IV, Debets AJM

[Mol Ecol] 27 : 4808-4819
Optimization of a fragment linking hit toward Dengue and Zika virus NS5 methyltransferases inhibitors. (2018)
Hernandez J, Hoffer L, Coutard B, Querat G, Roche P, Morelli X, Decroly E, Barral K

[Eur J Med Chem] 161 : 323-333
Analysis of carbohydrate-active enzymes in Thermogemmatispora sp. strain T81 reveals carbohydrate degradation ability. (2018)
Tomazini A Jr, Lal S, Munir R, Stott M, Henrissat B, Polikarpov I, Sparling R, Levin DB

[Can J Microbiol] 64 : 1-12
A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation. (2018)
Cartmell A, Munoz-Munoz J, Briggs JA, Ndeh DA, Lowe EC, Basle A, Terrapon N, Stott K, Heunis T, Gray J, Yu L, Dupree P, Fernandes PZ, Shah S, Williams SJ, Labourel A, Trost M, Henrissat B, Gilbert HJ

[Nat Microbiol] 3 : 1314-1326
Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri. (2018)
Vesth TC, Nybo JL, Theobald S, Frisvad JC, Larsen TO, Nielsen KF, Hoof JB, Brandl J, Salamov A, Riley R, Gladden JM, Phatale P, Nielsen MT, Lyhne EK, Kogle ME, Strasser K, McDonnell E, Barry K, Clum A, Chen C, LaButti K, Haridas S, Nolan M, Sandor L, Kuo A, Lipzen A, Hainaut M, Drula E, Tsang A, Magnuson JK, Henrissat B, Wiebenga A, Simmons BA, Makela MR, de Vries RP, Grigoriev IV, Mortensen UH, Baker SE, Andersen MR

[Nat Genet] 50 : 1688-1695
From proteins to polysaccharides: lifestyle and genetic evolution of Coprothermobacter proteolyticus. (2018)
Kunath BJ, Delogu F, Naas AE, Arntzen MO, Eijsink VGH, Henrissat B, Hvidsten TR, Pope PB

[ISME J] in press
Leveraging single-cell genomics to expand the fungal tree of life. (2018)
Ahrendt SR, Quandt CA, Ciobanu D, Clum A, Salamov A, Andreopoulos B, Cheng JF, Woyke T, Pelin A, Henrissat B, Reynolds NK, Benny GL, Smith ME, James TY, Grigoriev IV

[Nat Microbiol] 3 : 1417-1428
Biochemical and Structural Characterization of TesA, a Major Thioesterase Required for Outer-Envelope Lipid Biosynthesis in M. tuberculosis. (2018)
Nguyen PC, Nguyen VS, Martin BP, Fourquet P, Camoin L, Spilling CD, Cavalier JF, Cambillau C, Canaan S

[J Mol Biol] 430 : 5120-5136
The human gut microbe Bacteroides thetaiotaomicron encodes the founding member of a novel glycosaminoglycan-degrading polysaccharide lyase family PL29. (2018)
Ndeh D, Munoz-Munoz J, Cartmell A, Bulmer D, Wills C, Henrissat B, Gray J

[J Biol Chem] 293 : 17906-17916
Functional metagenomics identifies an exosialidase with an inverting catalytic mechanism that defines a new glycoside hydrolase family (GH156). (2018)
Chuzel L, Ganatra MB, Rapp E, Henrissat B, Taron CH

[J Biol Chem] 293 : 18138-18150
[Innate immunity evasion mechanisms of filoviruses]. (2018)
Martin B, Decroly E

[Med Sci (Paris)] 34 : 671-677
Rapid divergence of genome architectures following the origin of an ectomycorrhizal symbiosis in the genus Amanita. (2018)
Hess J, Skrede I, De Mares MC, Hainaut M, Henrissat B, Pringle A

[Mol Biol Evol] 35 : 2786-2804
Characterization of epitope specificities of reference antibodies used for the quantification of the birch pollen allergen Bet v 1. (2018)
Brier S, Le Mignon M, Jain K, Lebrun C, Peurois F, Kellenberger C, Bordas-Le Floch V, Mascarell L, Nony E, Moingeon P

[Allergy] 73 : 1032-1040
Functional Carbohydrate Binding Modules Identified in evolved Dits from Siphophages Infecting various Gram-positive Bacteria. (2018)
Hayes S, Vincentelli R, Mahony J, Nauta A, Ramond L, Lugli GA, Ventura M, van Sinderen D, Cambillau C

[Mol Microbiol] 110 : 777-795
Crystal structures of Lymphocytic choriomeningitis virus endonuclease domain complexed with diketo-acid ligands. (2018)
Saez-Ayala M, Yekwa EL, Carcelli M, Canard B, Alvarez K, Ferron F

[IUCrJ] 5 : 223-235
Structural and Functional Basis of the Fidelity of Nucleotide Selection by Flavivirus RNA-Dependent RNA Polymerases. (2018)
Selisko B, Papageorgiou N, Ferron F, Canard B

[Viruses] 10
Folding Mechanism of the SH3 Domain from Grb2. (2018)
Troilo F, Bonetti D, Camilloni C, Toto A, Longhi S, Brunori M, Gianni S

[J Phys Chem B] in press
Conformational response to charge clustering in synthetic intrinsically disordered proteins. (2018)
Tedeschi G, Salladini E, Santambrogio C, Grandori R, Longhi S, Brocca S

[Biochim Biophys Acta] 1862 : 2204-2214
How Robust Is the Mechanism of Folding-Upon-Binding for an Intrinsically Disordered Protein? (2018)
Bonetti D, Troilo F, Brunori M, Longhi S, Gianni S

[Biophys J] 114 : 1889-1894
Exploration of nucleoprotein alpha-MoRE and XD interactions of Nipah and Hendra viruses. (2018)
Shang X, Chu W, Chu X, Xu L, Longhi S, Wang J

[J Mol Model] 24 : 113
How to Control HTLV-1-Associated Diseases: Preventing de Novo Cellular Infection Using Antiviral Therapy. (2018)
Pasquier A, Alais S, Roux L, Thoulouze MI, Alvarez K, Journo C, Dutartre H, Mahieux R

[Front Microbiol] 9 : 278
Synthesis and substrate properties towards HIV-1 reverse transcriptase of new diphosphate analogues of 9-[(2-phosphonomethoxy)ethyl]adenine. (2018)
Laux WH, Priet S, Alvarez K, Peyrottes S, Perigaud C

[Antivir Chem Chemother] 26 : 2040206618757636
Development and characterization of stable anaerobic thermophilic methanogenic microbiomes fermenting switchgrass at decreasing residence times. (2018)
Liang X, Whitham JM, Holwerda EK, Shao X, Tian L, Wu YW, Lombard V, Henrissat B, Klingeman DM, Yang ZK, Podar M, Richard TL, Elkins JG, Brown SD, Lynd LR

[Biotechnol Biofuels] 11 : 243
Exploiting the S4-S5 Specificity of Human Neutrophil Proteinase 3 to Improve the Potency of Peptidyl Di(chlorophenyl)-phosphonate Ester Inhibitors: A Kinetic and Molecular Modeling Analysis. (2018)
Guarino C, Gruba N, Grzywa R, Dyguda-Kazimierowicz E, Hamon Y, Legowska M, Skorenski M, Dallet-Choisy S, Marchand-Adam S, Kellenberger C, Jenne DE, Sienczyk M, Lesner A, Gauthier F, Korkmaz B

[J Med Chem] 61 : 1858-1870
A gated relaxation oscillator mediated by FrzX controls morphogenetic movements in Myxococcus xanthus. (2018)
Guzzo M, Murray SM, Martineau E, Lhospice S, Baronian G, My L, Zhang Y, Espinosa L, Vincentelli R, Bratton BP, Shaevitz JW, Molle V, Howard M, Mignot T,

[Nat Microbiol] 3 : 948-959
The European Virus Archive goes global: A growing resource for research. (2018)
Romette JL, Prat CM, Gould EA, de Lamballerie X, Charrel R, Coutard B, Fooks AR, Bardsley M, Carroll M, Drosten C, Drexler JF, Gunther S, Klempa B, Pinschewer D, Klimkait T, Avsic-Zupanc T, Capobianchi MR, Dicaro A, Ippolito G, Nitsche A, Koopmans M, Reusken C, Gorbalenya A, Raoul H, Bourhy H, Mettenleiter T, Reiche S, Batten C, Sabeta C, Paweska JT, Eropkin M, Zverev V, Hu Z, Mac Cullough S, Mirazimi A, Pradel F, Lieutaud P

[Antiviral Res] 158 : 127-134
Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass. (2018)
Miyauchi S, Rancon A, Drula E, Hage H, Chaduli D, Favel A, Grisel S, Henrissat B, Herpoel-Gimbert I, Ruiz-Duenas FJ, Chevret D, Hainaut M, Lin J, Wang M, Pangilinan J, Lipzen A, Lesage-Meessen L, Navarro D, Riley R, Grigoriev IV, Zhou S, Raouche S, Rosso MN

[Biotechnol Biofuels] 11 : 201
Production of alpha-1,3-L-arabinofuranosidase active on substituted xylan does not improve compost degradation by Agaricus bisporus. (2018)
Vos AM, Jurak E, de Gijsel P, Ohm RA, Henrissat B, Lugones LG, Kabel MA, Wosten HAB

[PLoS One] 13 : e0201090
Widespread anti-CRISPR proteins in virulent bacteriophages inhibit a range of Cas9 proteins. (2018)
Hynes AP, Rousseau GM, Agudelo D, Goulet A, Amigues B, Loehr J, Romero DA, Fremaux C, Horvath P, Doyon Y, Cambillau C, Moineau S

[Nat Commun] 9 : 2919
The gp27-like Hub of VgrG Serves as Adaptor to Promote Hcp Tube Assembly. (2018)
Renault MG, Zamarreno Beas J, Douzi B, Chabalier M, Zoued A, Brunet YR, Cambillau C, Journet L, Cascales E

[J Mol Biol] 430(18 Pt B) : 3143-3156
The methyltransferase domain of the Sudan ebolavirus L protein specifically targets internal adenosines of RNA substrates, in addition to the cap structure. (2018)
B. Martin B. Coutard T. Guez G.C. Paesen B. Canard F. Debart J.J. Vasseur J.M. Grimes E. Decroly

[Nucleic Acids Res] : https://doi.org/10.1093/nar/gky637
Genome Sequencing and analyses of Two Marine Fungi from the North Sea Unraveled a Plethora of Novel Biosynthetic Gene Clusters. (2018)
Kumar A, Sorensen JL, Hansen FT, Arvas M, Syed MF, Hassan L, Benz JP, Record E, Henrissat B, Poggeler S, Kempken F

[Sci Rep] 8 : 10187
Talaromyces borbonicus, sp. nov., a novel fungus from biodegraded Arundo donax with potential abilities in lignocellulose conversion. (2018)
Varriale S, Houbraken J, Granchi Z, Pepe O, Cerullo G, Ventorino V, Chin-A-Woeng T, Meijer M, Riley R, Grigoriev IV, Henrissat B, de Vries RP, Faraco V

[Mycologia] 110 : 316-324
Broad genomic sampling reveals a smut pathogenic ancestry of the fungal clade Ustilaginomycotina. (2018)
Kijpornyongpan T, Mondo SJ, Barry K, Sandor L, Lee J, Lipzen A, Pangilinan J, LaButti K, Hainaut M, Henrissat B, Grigoriev IV, Spatafora JW, Aime MC

[Mol Biol Evol] 35 : 1840-1854
Ancient acquisition of "alginate utilization loci" by human gut microbiota. (2018)
Mathieu S, Touvrey-Loiodice M, Poulet L, Drouillard S, Vincentelli R, Henrissat B, Skjak-Braek G, Helbert W

[Sci Rep] 8 : 8075
Genetic and enzymatic characterization of 3-O-sulfotransferase SNPs associated with Plasmodium falciparum parasitaemia. (2018)
Nguyen NT, Vives RR, Torres M, Delauzun V, Saesen E, Roig-Zamboni V, Lortat-Jacob H, Rihet P, Bourne Y

[Glycobiology] 28 : 534-541
Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi. (2018)
Knapp DG, Nemeth JB, Barry K, Hainaut M, Henrissat B, Johnson J, Kuo A, Lim JHP, Lipzen A, Nolan M, Ohm RA, Tamas L, Grigoriev IV, Spatafora JW, Nagy LG, Kovacs GM

[Sci Rep] 8 : 6321
Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts. (2018)
Druzhinina IS, Chenthamara K, Zhang J, Atanasova L, Yang D, Miao Y, Rahimi MJ, Grujic M, Cai F, Pourmehdi S, Salim KA, Pretzer C, Kopchinskiy AG, Henrissat B, Kuo A, Hundley H, Wang M, Aerts A, Salamov A, Lipzen A, LaButti K, Barry K, Grigoriev IV, Shen Q, Kubicek CP

[PLoS Genet] 14 : e1007322
Draft genome sequence of the basidiomycete white-rot fungus Phlebia centrifuga (2018)
Makela MR, Peng M, Granchi Z, Chin-A-Woeng T, Hegi R, van Pelt SI, Ahrendt S, Riley R, Hainaut M, Henrissat B, Grigoriev IV, de Vries RP, Hilden KS

[Genome Announc] 6 : e01414-17
The ectomycorrhizal basidiomycete Laccaria bicolor releases a secreted beta-1,4 endoglucanase that plays a key role in symbiosis development. (2018)
Zhang F, Anasontzis GE, Labourel A, Champion C, Haon M, Kemppainen M, Commun C, Deveau A, Pardo A, Veneault-Fourrey C, Kohler A, Rosso MN, Henrissat B, Berrin JG, Martin F

[New Phytol] 220 : 1309-1321
Glycosyltransferase genes that cause monogenic congenital disorders of glycosylation are distinct from glycosyltransferase genes associated with complex diseases. (2018)
Joshi HJ, Hansen L, Narimatsu Y, Freeze HH, Henrissat B, Bennett E, Wandall HH, Clausen H, Schjoldager KT

[Glycobiology] 28 : 284-294
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. (2018)
Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D, Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ

[Nat Biotechnol] 36 : 359-367
High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis. (2018)
Chen ECH, Morin E, Beaudet D, Noel J, Yildirir G, Ndikumana S, Charron P, St-Onge C, Giorgi J, Kruger M, Marton T, Ropars J, Grigoriev IV, Hainaut M, Henrissat B, Roux C, Martin F, Corradi N

[New Phytol] 220 : 1161-1171
An ancient family of lytic polysaccharide monooxygenases with roles in arthropod development and biomass digestion. (2018)
Sabbadin F, Hemsworth GR, Ciano L, Henrissat B, Dupree P, Tryfona T, Marques RDS, Sweeney ST, Besser K, Elias L, Pesante G, Li Y, Dowle AA, Bates R, Gomez LD, Simister R, Davies GJ, Walton PH, Bruce NC, McQueen-Mason SJ

[Nat Commun] 9 : 756
Towards a complete structural deciphering of Type VI secretion system. (2018)
Nguyen VS, Douzi B, Durand E, Roussel A, Cascales E, Cambillau C

[Curr Opin Struct Biol] 49 : 77-84
Structure-Function Analysis of the C-Terminal Domain of the Type VI Secretion TssB Tail Sheath Subunit. (2018)
Douzi B, Logger L, Spinelli S, Blangy S, Cambillau C, Cascales E

[J Mol Biol] 430 : 297-309
Type IX secretion system PorM and gliding machinery GldM form arches spanning the periplasmic space. (2018)
Leone P, Roche J, Vincent MS, Tran QH, Desmyter A, Cascales E, Kellenberger C, Cambillau C, Roussel A

[Nat Commun] 9 : 429
A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae). (2018)
Schoville SD, Chen YH, Andersson MN, Benoit JB, Bhandari A, Bowsher JH, Brevik K, Cappelle K, Chen MM, Childers AK, Childers C, Christiaens O, Clements J, Didion EM, Elpidina EN, Engsontia P, Friedrich M, Garcia-Robles I, Gibbs RA, Goswami C, Grapputo A, Gruden K, Grynberg M, Henrissat B, Jennings EC, Jones JW, Kalsi M, Khan SA, Kumar A,Li F, Lombard V, Ma X, Martynov A, Miller NJ, Mitchell RF, Munoz-Torres M, Muszewska A, Oppert B, Palli SR, Panfilio KA, Pauchet Y, Perkin LC, Petek M, Poelchau MF, Record E, Rinehart JP, Robertson HM, Rosendale AJ, Ruiz-Arroyo VM, Smagghe G, Szendrei Z, Thomas GWC, Torson AS, Vargas Jentzsch IM, Weirauch MT, Yates AD, Yocum GD, Yoon JS, Richards S

[Sci Rep] 8 : 1931
Lytic xylan oxidases from wood-decay fungi unlock biomass degradation. (2018)
Couturier M, Ladeveze S, Sulzenbacher G, Ciano L, Fanuel M, Moreau C, Villares A, Cathala B, Chaspoul F, Frandsen KE, Labourel A, Herpoel-Gimbert I, Grisel S, Haon M, Lenfant N, Rogniaux H, Ropartz D, Davies GJ, Rosso MN, Walton PH, Henrissat B, Berrin JG

[Nat Chem Biol] 14 : 306-310
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans. (2018)
Seeleuthner Y, Mondy S, Lombard V, Carradec Q, Pelletier E, Wessner M, Leconte J, Mangot JF, Poulain J, Labadie K, Logares R, Sunagawa S, de Berardinis V, Salanoubat M, Dimier C, Kandels-Lewis S, Picheral M, Searson S, Pesant S, Poulton N, Stepanauskas R, Bork P, Bowler C, Hingamp P, Sullivan MB, Iudicone D, Massana R, Aury JM, Henrissat B, Karsenti E, Jaillon O, Sieracki M, de Vargas C, Wincker P

[Nat Commun] 9 : 310
Filovirus proteins for antiviral drug discovery: Structure/function of proteins involved in assembly and budding. (2018)
Martin B, Reynard O, Volchkov V, Decroly E

[Antiviral Res] 150 : 183-192
De novo assembly of the complex genome of Nippostrongylus brasiliensis using MinION long reads. (2018)
Eccles D, Chandler J, Camberis M, Henrissat B, Koren S, Le Gros G, Ewbank JJ

[BMC Biol] 16 : 6
Identification of Euglena gracilis beta-1,3-glucan phosphorylase and establishment of a new glycoside hydrolase (GH) family GH149. (2018)
Kuhaudomlarp S, Patron NJ, Henrissat B, Rejzek M, Saalbach G, Field RA

[J Biol Chem] 293 : 2865-2876
Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists. (2018)
Martino E, Morin E, Grelet GA, Kuo A, Kohler A, Daghino S, Barry KW, Cichocki N, Clum A, Dockter RB, Hainaut M, Kuo RC, LaButti K, Lindahl BD, Lindquist EA, Lipzen A, Khouja HR, Magnuson J, Murat C, Ohm RA, Singer SW, Spatafora JW, Wang M, Veneault-Fourrey C, Henrissat B, Grigoriev IV, Martin FM, Perotto S

[New Phytol] 217 : 1213-1229
Structural and molecular basis of mismatch correction and ribavirin excision from coronavirus RNA. (2018)
Ferron F, Subissi L, Silveira De Morais AT, Le NTT, Sevajol M, Gluais L, Decroly E, Vonrhein C, Bricogne G, Canard B, Imbert I

[Proc Natl Acad Sci U S A] 115 : E162-E171
Dietary pectic glycans are degraded by coordinated enzyme pathways in human colonic Bacteroides. (2018)
Luis AS, Briggs J, Zhang X, Farnell B, Ndeh D, Labourel A, Basle A, Cartmell A, Terrapon N, Stott K, Lowe EC, McLean R, Shearer K, Schuckel J, Venditto I, Ralet MC, Henrissat B, Martens EC, Mosimann SC, Abbott DW, Gilbert HJ

[Nat Microbiol] 3 : 210-219
Novel carbohydrate binding modules in the surface anchored a-amylase of Eubacterium rectale provide a molecular rationale for the range of starches used by this organism in the human gut. (2018)
Cockburn DW, Suh C, Medina KP, Duvall RM, Wawrzak Z, Henrissat B, Koropatkin NM

[Mol Microbiol] 107 : 249-264
PULDB: the expanded database of Polysaccharide Utilization Loci. (2018)
Terrapon N, Lombard V, Drula E, Lapebie P, Al-Masaudi S, Gilbert HJ, Henrissat B

[Nucleic Acids Res] 46 : D677-D683

2017

InSiDDe: A Server for Designing Artificial Disordered Proteins. (2017)
Schramm A, Lieutaud P, Gianni S, Longhi S, Bignon C

[Int J Mol Sci] 19
Comparative Metagenomics of Cellulose- and Poplar Hydrolysate-Degrading Microcosms from Gut Microflora of the Canadian Beaver (Castor canadensis) and North American Moose (Alces americanus) after Long-Term Enrichment. (2017)
Wong MT, Wang W, Couturier M, Razeq FM, Lombard V, Lapebie P, Edwards EA, Terrapon N, Henrissat B, Master ER

[Front Microbiol] 8 : 2504
Hot spots for protein partnership at the surface of cholinesterases and related alpha/beta hydrolase fold proteins or domains - a structural perspective. (2017)
Bourne Y, Marchot P

[Molecules] 23 : 35
A metagenome-derived thermostable beta-glucanase with an unusual module architecture which defines the new glycoside hydrolase family GH148. (2017)
Angelov A, Pham VTT, Ubelacker M, Brady S, Leis B, Pill N, Brolle J, Mechelke M, Moerch M, Henrissat B, Liebl W

[Sci Rep] 7 : 17306
Pan-cellulosomics of mesophilic Clostridia: variations on a theme. (2017)
Dassa B, Borovok I, Lombard V, Henrissat B, Lamed R, Bayer EA, Morais S

[Microorganisms] 5 : pii: E74
Structural disorder and induced folding within two cereal, ABA stress and ripening (ASR) proteins. (2017)
Hamdi K, Salladini E, O'Brien DP, Brier S, Chenal A, Yacoubi I, Longhi S

[Sci Rep] 7 : 15544
Interfacial properties of NTAIL, an intrinsically disordered protein. (2017)
Benarouche A, Habchi J, Cagna A, Maniti O, Girard-Egrot A, Cavalier JF, Longhi S, Carriere F

[Biophys J] 113 : 2723-2735
Partner-mediated polymorphism of an intrinsically disordered protein. (2017)
Bignon C, Troilo F, Gianni S, Longhi S

[J Mol Biol] 430 : 2493-2507
[How is transcription reinitiation governed in measles virus?] (2017)
Bloyet LM, Roche P, Gerlier D, Longhi S

[Med Sci (Paris)] 33 : 843-845
Ten years of CAZypedia: A living encyclopedia of carbohydrate-active enzymes. (2017)
The CAZypedia Consortium

[Glycobiology] 28 : 3-8
Reverse chemical ecology: Olfactory proteins from the giant panda and their interactions with putative pheromones and bamboo volatiles. (2017)
Zhu J, Arena S, Spinelli S, Liu D, Zhang G, Wei R, Cambillau C, Scaloni A, Wang G, Pelosi P

[Proc Natl Acad Sci U S A] 114 : E9802-E9810
Glycosylate and move! The glycosyltransferase Maf is involved in bacterial flagella formation. (2017)
Sulzenbacher G, Roig-Zamboni V, Lebrun R, Guerardel Y, Murat D, Mansuelle P, Yamakawa N, Quian XX, Vincentelli R, Bourne Y, Wu LF, Alberto F

[Environ Microbiol] 20 : 228-240
Unraveling the Self-Assembly of the Pseudomonas aeruginosa XcpQ Secretin Periplasmic Domain Provides New Molecular Insights into Type II Secretion System Secreton Architecture and Dynamics. (2017)
Douzi B, Trinh NTT, Michel-Souzy S, Desmyter A, Ball G, Barbier P, Kosta A, Durand E, Forest KT, Cambillau C, Roussel A, Voulhoux R

[MBio] 8 : e01185-17
Structure of human lysosomal acid alpha-glucosidase - a guide for the treatment of Pompe disease. (2017)
Roig-Zamboni V, Cobucci-Ponzano B, Iacono R, Ferrara MC, Germany S, Bourne Y, Parenti G, Moracci M, Sulzenbacher G

[Nat Commun] 8 : 1111
Structural and electronic determinants of lytic polysaccharide monooxygenase reactivity on polysaccharide substrates. (2017)
Simmons TJ, Frandsen KEH, Ciano L, Tryfona T, Lenfant N, Poulsen JC, Wilson LFL, Tandrup T, Tovborg M, Schnorr K, Johansen KS, Henrissat B, Walton PH, Lo Leggio L, Dupree P

[Nat Commun] 8 : 1064
The Henipavirus V protein is a prevalently unfolded protein with a zinc-finger domain involved in binding to DDB1. (2017)
Salladini E, Delauzun V and Longhi S

[Mol Biosyst] 13 : 2254-2267
Feed in summer, rest in winter: microbial carbon utilization in forest topsoil. (2017)
Zifcakova L, Vetrovsky T, Lombard V, Henrissat B, Howe A, Baldrian P

[Microbiome] 5 : 122
Unique organization and unprecedented diversity of the Bacteroides (Pseudobacteroides) cellulosolvens cellulosome system. (2017)
Zhivin O, Dassa B, Morais S, Utturkar SM, Brown SD, Henrissat B, Lamed R, Bayer EA

[Biotechnol Biofuels] 10 : 211
The yeast Geotrichum candidum encodes functional lytic polysaccharide monooxygenases. (2017)
Ladeveze S, Haon M, Villares A, Cathala B, Grisel S, Herpoel-Gimbert I, Henrissat B, Berrin JG

[Biotechnol Biofuels] 10 : 215
Metabolic roles of uncultivated bacterioplankton lineages in the Northern Gulf of Mexico "Dead Zone". (2017)
Thrash JC, Seitz KW, Baker BJ, Temperton B, Gillies LE, Rabalais NN, Henrissat B, Mason OU

[MBio] 8 : pii: e01017-17
Structural and functional insights into the periplasmic detector domain of the GacS histidine kinase controlling biofilm formation in Pseudomonas aeruginosa. (2017)
Ali-Ahmad A, Fadel F, Sebban-Kreuzer C, Ba M, Pelissier GD, Bornet O, Guerlesquin F, Bourne Y, Bordi C, Vincent F

[Sci Rep] 7 : 11262
Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis. (2017)
Gentekaki E, Curtis BA, Stairs CW, Klimes V, Elias M, Salas-Leiva DE, Herman EK, Eme L, Arias MC, Henrissat B, Hilliou F, Klute MJ, Suga H, Malik SB, Pightling AW, Kolisko M, Rachubinski RA, Schlacht A, Soanes DM, Tsaousis AD, Archibald JM, Ball SG, Dacks JB, Clark CG, van der Giezen M, Roger AJ

[PLoS Biol] 15 : e2003769
How a Glycoside Hydrolase Recognizes a Helical Polyglucan. (2017)
Henrissat B, Garron ML

[Structure] 25 : 1319-1321
A Genomic View of Glycobiology (2017)
Henrissat B, Surolia A, Stanley P

[Essentials of Glycobiology (3rd Edition)] Chapter 8 : pp. 89-98
Neutralization of Human Interleukin 23 by Multivalent Nanobodies Explained by the Structure of Cytokine-Nanobody Complex. (2017)
Desmyter A, Spinelli S, Boutton C, Saunders M, Blachetot C, de Haard H, Denecker G, Van Roy M, Cambillau C, Rommelaere H

[Front Immunol] 8 : 884
Gapless genome assembly of Colletotrichum higginsianum reveals chromosome structure and association of transposable elements with secondary metabolite gene clusters. (2017)
Dallery JF, Lapalu N, Zampounis A, Pigne S, Luyten I, Amselem J, Wittenberg AHJ, Zhou S, de Queiroz MV, Robin GP, Auger A, Hainaut M, Henrissat B, Kim KT, Lee YH, Lespinet O, Schwartz DC, Thon MR, O'Connell RJ

[BMC Genomics] 18 : 667
Draft genome sequence of a monokaryotic model brown-rot fungus Postia (Rhodonia) placenta SB12. (2017)
Gaskell J, Kersten P, Larrondo LF, Canessa P, Martinez D, Hibbett D, Schmoll M, Kubicek CP, Martinez AT, Yadav J, Master E, Magnuson JK, Yaver D, Berka R, Lail K, Chen C, LaButti K, Nolan M, Lipzen A, Aerts A, Riley R, Barry K, Henrissat B, Blanchette R, Grigoriev IV, Cullen D

[Genom Data] 14 : 21-23
A Triad of Crystals Sheds Light on MDGA Interference with Neuroligation. (2017)
Thoumine O, Marchot P

[Neuron] 95 : 729-732
Preface: Cholinergic Mechanisms. (2017)
Prado MAM, Marchot P, Silman I

[J Neurochem] 142 Suppl 2 : 3-6
Toscana virus nucleoprotein oligomer organization observed in solution. (2017)
Baklouti A, Goulet A, Lichiere J, Canard B, Charrel RN, Ferron F, Coutard B, Papageorgiou N

[Acta Crystallogr D Struct Biol] 73 : 650-659
Host recognition by lactic acid bacterial phages. (2017)
Mahony J, Cambillau C, van Sinderen D

[FEMS Microbiol Rev] 41 : S16-S26
Bivalent Llama Single-Domain Antibody Fragments against Tumor Necrosis Factor Have Picomolar Potencies due to Intramolecular Interactions. (2017)
Beirnaert E, Desmyter A, Spinelli S, Lauwereys M, Aarden L, Dreier T, Loris R, Silence K, Pollet C, Cambillau C, de Haard H

[Front Immunol] 8 : 867
TssA: The cap protein of the Type VI secretion system tail. (2017)
Zoued A, Durand E, Santin YG, Journet L, Roussel A, Cambillau C, Cascales E

[Bioessays] in press
An evolutionarily distinct family of polysaccharide lyases removes rhamnose capping of complex arabinogalactan proteins. (2017)
Munoz-Munoz J, Cartmell A, Terrapon N, Basle A, Henrissat B, Gilbert HJ

[J Biol Chem] 292 : 13271-13283
Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation. (2017)
Svartstrom O, Alneberg J, Terrapon N, Lombard V, de Bruijn I, Malmsten J, Dalin AM, El Muller E, Shah P, Wilmes P, Henrissat B, Aspeborg H, Andersson AF

[ISME J] 11 : 2538-2551
Comparative analysis of basidiomycete transcriptomes reveals a core set of expressed genes encoding plant biomass degrading enzymes. (2017)
Peng M, Aguilar-Pontes MV, Hainaut M, Henrissat B, Hilden K, Makela MR, de Vries RP

[Fungal Genet Biol] 112 : 40-46
Toward the identification of viral cap-methyltransferase inhibitors by fluorescence screening assay. (2017)
Aouadi W, Eydoux C, Coutard B, Martin B, Debart F, Vasseur JJ, Contreras JM, Morice C, Querat G, Jung ML, Canard B, Guillemot JC, Decroly E

[Antiviral Res] 144 : 330-339
Type VI secretion TssK baseplate protein exhibits structural similarity with phage receptor-binding proteins and evolved to bind the membrane complex. (2017)
Nguyen VS, Logger L, Spinelli S, Legrand P, Huyen Pham TT, Nhung Trinh TT, Cherrak Y, Zoued A, Desmyter A, Durand E, Roussel A, Kellenberger C, Cascales E, Cambillau C

[Nat Microbiol] 2 : 17103
Antiviral activity of [1,2,3]triazolo[4,5-d]pyrimidin-7(6H)-ones against chikungunya virus targeting the viral capping nsP1. (2017)
Gigante A, Gomez-SanJuan A, Delang L, Li C, Bueno O, Gamo AM, Priego EM, Camarasa MJ, Jochmans D, Leyssen P, Decroly E, Coutard B, Querat G, Neyts J, Perez-Perez MJ

[Antiviral Res. ] 144 : 216-222
How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans. (2017)
Cartmell A, Lowe EC, Basle A, Firbank SJ, Ndeh DA, Murray H, Terrapon N, Lombard V, Henrissat B, Turnbull JE, Czjzek M, Gilbert HJ, Bolam DN

[Proc Natl Acad Sci U S A] 114 : 7037-7042
How order and disorder within paramyxoviral nucleoproteins and phosphoproteins orchestrate the molecular interplay of transcription and replication. (2017)
Longhi S, Bloyet LM, Gianni S and Gerlier D.

[Cell Mol Life Sci] 74(17) : 3091-3118
Transcription and replication mechanisms of Bunyaviridae and Arenaviridae L proteins. (2017)
Ferron F, Weber F, de la Torre JC, Reguera J

[Virus Res] 234 : 118-134
A parts list for fungal cellulosomes revealed by comparative genomics. (2017)
Haitjema CH, Gilmore SP, Henske JK, Solomon KV, de Groot R, Kuo A, Mondo SJ, Salamov AA, LaButti K, Zhao Z, Chiniquy J, Barry K, Brewer HM, Purvine SO, Wright AT, Hainaut M, Boxma B, van Alen T, Hackstein JHP, Henrissat B, Baker SE, Grigoriev IV, O'Malley MA

[Nat Microbiol] 2 : 17087
Biochemical principles and inhibitors to interfere with viral capping pathways. (2017)
Decroly E, Canard B

[Curr Opin Virol] 24 : 87-96
A bioinformatics analysis of 3400 lytic polysaccharide oxidases from family AA9. (2017)
Lenfant N, Hainaut M, Terrapon N, Drula E, Lombard V, Henrissat B

[Carbohydr Res] 448 : 166-174
A Metagenomics Investigation of Carbohydrate-Active Enzymes along the Gastrointestinal Tract of Saudi Sheep. (2017)
Al-Masaudi S, El Kaoutari A, Drula E, Al-Mehdar H, Redwan EM, Lombard V, Henrissat B

[Front Microbiol] 8 : 666
Camelid nanobodies used as crystallization chaperones for different constructs of PorM, a component of the type IX secretion system from Porphyromonas gingivalis. (2017)
Duhoo Y, Roche J, Trinh TTN, Desmyter A, Gaubert A, Kellenberger C, Cambillau C, Roussel A, Leone P

[Acta Crystallogr F Struct Biol Commun] 73 : 286-293
Unusual active site location and catalytic apparatus in a glycoside hydrolase family. (2017)
Munoz-Munoz J, Cartmell A, Terrapon N, Henrissat B, Gilbert HJ

[Proc Natl Acad Sci U S A] 114 : 4936-4941
Archaea: essential inhabitants of the human digestive microbiota (2017)
Demonfort-Nkamga V, Henrissat B, Drancourt M

[Human Microbiome Journal] 3 : 1-8
Natural genomic amplification of cholinesterase genes in animals. (2017)
Chatonnet A, Lenfant N, Marchot P, Selkirk ME

[J Neurochem] 142 Suppl 2 : 73-81
Substrate selectivity of Dengue and Zika virus NS5 polymerase towards 2'-modified nucleotide analogues. (2017)
Potisopon S, Ferron F, Fattorini V, Selisko B, Canard B

[Antiviral Res] 140 : 25-36
The three-finger toxin fold: a multifunctional structural scaffold able to modulate cholinergic functions. (2017)
Kessler P, Marchot P, Silva M, Servent D

[J Neurochem] 142 Suppl 2 : 7-18
Cyclic imine toxins from dinoflagellates: a growing family of potent antagonists of the nicotinic acetylcholine receptors. (2017)
Molgo J, Marchot P, Araoz R, Benoit E, Iorga BI, Zakarian A, Taylor P, Bourne Y, Servent D

[J Neurochem] 142 Suppl 2 : 41-51
Genetic and functional characterisation of the lactococcal P335 phage-host interactions. (2017)
Mahony J, Oliveira J, Collins B, Hanemaaijer L, Lugli GA, Neve H, Ventura M, Kouwen TR, Cambillau C, van Sinderen D

[BMC Genomics] 18 : 146
Evolved distal tail carbohydrate binding modules of Lactobacillus phage J-1: a novel type of anti-receptor widespread among lactic acid bacteria phages. (2017)
Dieterle ME, Spinelli S, Sadovskaya I, Piuri M, Cambillau C

[Mol Microbiol] 104 : 608-620
Exploring the genomic diversity of black yeasts and relatives (Chaetothyriales, Ascomycota). (2017)
Teixeira MM, Moreno LF, Stielow BJ, Muszewska A, Hainaut M, Gonzaga L, Abouelleil A, Patane JS, Priest M, Souza R, Young S, Ferreira KS, Zeng Q, da Cunha MM, Gladki A, Barker B, Vicente VA, de Souza EM, Almeida S, Henrissat B, Vasconcelos AT, Deng S, Voglmayr H, Moussa TA, Gorbushina A, Felipe MS, Cuomo CA, de Hoog GS

[Stud Mycol] 86 : 1-28
Complex pectin metabolism by gut bacteria reveals novel catalytic functions. (2017)
Ndeh D, Rogowski A, Cartmell A, Luis AS, Basle A, Gray J, Venditto I, Briggs J, Zhang X, Labourel A, Terrapon N, Buffetto F, Nepogodiev S, Xiao Y, Field RA, Zhu Y, O'Neill MA, Urbanowicz BR, York WS, Davies GJ, Abbott DW, Ralet MC, Martens EC, Henrissat B, Gilbert HJ

[Nature] 544 : 65-70
Filovirus proteins for antiviral drug discovery: Structure/function bases of the replication cycle. (2017)
Martin B, Canard B, Decroly E

[Antiviral Res] 141 : 48-61
Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus. (2017)
de Vries RP, Riley R, Wiebenga A, Aguilar-Osorio G, Amillis S, Uchima CA, Anderluh G, Asadollahi M, Askin M, Barry K, Battaglia E, Bayram O, Benocci T, Braus-Stromeyer SA, Caldana C, Canovas D, Cerqueira GC, Chen F, Chen W, Choi C, Clum A, Dos Santos RA, Damasio AR, Diallinas G, Emri T, Fekete E, Flipphi M, Freyberg S, Gallo A, Gournas C, Habgood R, Hainaut M, Harispe ML, Henrissat B, Hilden KS, Hope R, Hossain A, Karabika E, Karaffa L, Karanyi Z, Krasevec N, Kuo A, Kusch H, LaButti K, Lagendijk EL, Lapidus A, Levasseur A, Lindquist E, Lipzen A, Logrieco AF, MacCabe A, Makela MR, Malavazi I, Melin P, Meyer V, Mielnichuk N, Miskei M, Molnar AP, Mule G, Ngan CY, Orejas M, Orosz E, Ouedraogo JP, Overkamp KM, Park HS, Perrone G, Piumi F, Punt PJ, Ram AF, Ramon A, Rauscher S, Record E, Riano-Pachon DM, Robert V, Rohrig J, Ruller R, Salamov A, Salih NS, Samson RA, Sandor E, Sanguinetti M, Schutze T, Sepcic K, Shelest E, Sherlock G, Sophianopoulou V, Squina FM, Sun H, Susca A, Todd RB, Tsang A, Unkles SE, van de Wiele N, van Rossen-Uffink D, Oliveira JV, Vesth TC, Visser J, Yu JH, Zhou M, Andersen MR, Archer DB, Baker SE, Benoit I, Brakhage AA, Braus GH, Fischer R, Frisvad JC, Goldman GH, Houbraken J, Oakley B, Pocsi I, Scazzocchio C, Seiboth B, vanKuyk PA, Wortman J, Dyer PS, Grigoriev IV

[Genome Biol] 18 : 28
Discovery of genes coding for carbohydrate-active enzyme by metagenomic analysis of lignocellulosic biomasses. (2017)
Montella S, Ventorino V, Lombard V, Henrissat B, Pepe O, Faraco V

[Sci Rep] 7 : 42623
Characterization of a mycobacterial cellulase and its impact on biofilm- and drug-induced cellulose production. (2017)
Van Wyk N, Navarro D, Blaise M, Berrin JG, Henrissat B, Drancourt M, Kremer L

[Glycobiology] 27 : 392-399
Characterization of the Porphyromonas gingivalis Type IX Secretion Trans-Envelope PorKLMNP Core Complex. (2017)
Vincent MS, Canestrari MJ, Leone P, Stathopoulos J, Ize B, Zoued A, Cambillau C, Kellenberger C, Roussel A, Cascales E

[J Biol Chem] 292 : 3252-3261
Probing Conformational Changes and Interfacial Recognition Site of Lipases With Surfactants and Inhibitors. (2017)
Mateos-Diaz E, Amara S, Roussel A, Longhi S, Cambillau C, Carriere F

[Methods Enzymol] 583 : 279-307
High-throughput expression of animal venom toxins in Escherichia coli to generate a large library of oxidized disulphide-reticulated peptides for drug discovery. (2017)
Turchetto J*, Sequeira AF*, Ramond L*, Peysson F*, Bras JL, Saez NJ, Duhoo Y, Blemont M, Guerreiro CI, Quinton L, De Pauw E, Gilles N, Darbon H, Fontes CM, Vincentelli R

[Microb Cell Fact] 16 : 6
Gene design, fusion technology and TEV cleavage conditions influence the purification of oxidized disulphide-rich venom peptides in Escherichia coli. (2017)
Sequeira AF*, Turchetto J*, Saez NJ, Peysson F, Ramond L, Duhoo Y, Blemont M, Fernandes VO, Gama LT, Ferreira LM, Guerreiro CI, Gilles N, Darbon H, Fontes CM, Vincentelli R

[Microb Cell Fact] 16 : 4
A fibrolytic potential in the human ileum mucosal microbiota revealed by functional metagenomic. (2017)
Patrascu O, Beguet-Crespel F, Marinelli L, Le Chatelier E, Abraham AL, Leclerc M, Klopp C, Terrapon N, Henrissat B, Blottiere HM, Dore J, Bera-Maillet C

[Sci Rep] 7 : 40248
Comparative genomics of Mortierella elongata and its bacterial endosymbiont Mycoavidus cysteinexigens. (2017)
Uehling J, Gryganskyi A, Hameed K, Tschaplinski T, Misztal PK, Wu S, Desiro A, Vande Pol N, Du Z, Zienkiewicz A, Zienkiewicz K, Morin E, Tisserant E, Splivallo R, Hainaut M, Henrissat B, Ohm R, Kuo A, Yan J, Lipzen A, Nolan M, LaButti K, Barry K, Goldstein AH, Labbe J, Schadt C, Tuskan G, Grigoriev I, Martin F, Vilgalys R, Bonito G

[Environ Microbiol] 19 : 2964-2983
Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels. (2017)
Wu W, Davis RW, Tran-Gyamfi MB, Kuo A, LaButti K, Mihaltcheva S, Hundley H, Chovatia M, Lindquist E, Barry K, Grigoriev IV, Henrissat B, Gladden JM

[Appl Microbiol Biotechnol] 101 : 2603-2618
Binding of the methyl donor SAM to MERS-CoV 2' -O-methyltransferase nsp16 promotes the recruitment of the allosteric activator nsp10. (2017)
Aouadi W, Blanjoie A, Vasseur JJ, Debart F, Canard B, Decroly E

[J Virol] 91 : e02217-16
The Zika virus methyltransferase: structure and functions for drug design perspectives. (2017)
Coutard B, Barral K, Lichiere J, Selisko B, Martin B, Aouadi W, Ortiz Lombardia M, Debart F, Vasseur JJ, Guillemot JC, Canard B, Decroly E

[J Virol] 91 : e02202-16
The chimeric nature of the genomes of marine magnetotactic coccoid-ovoid bacteria defines a novel group of Proteobacteria. (2017)
Ji B, Zhang SD, Zhang WJ, Rouy Z, Alberto F, Santini CL, Mangenot S, Gagnot S, Philippe N, Pradel N, Zhang L, Tempel S, Li Y, Medigue C, Henrissat B, Coutinho PM, Barbe V, Talla E, Wu LF

[Environ Microbiol] 19 : 1103-1119
NMR assignments of the GacS histidine-kinase periplasmic detection domain from Pseudomonas aeruginosa PAO1. (2017)
Ali-Ahmad A, Bornet O, Fadel F, Bourne Y, Vincent F, Bordi C, Guerlesquin F, Sebban-Kreuzer C

[Biomol NMR Assign] 11 : 25-28
Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2 (2017)
Ali-Ahmad A, Garron ML, Zamboni V, Lenfant N, Nurizzo D, Henrissat B, Berrin JG, Bourne Y, Vincent F

[J Struct Biol] 197 : 227-235
Broad phylogeny and functionality of cellulosomal components in the bovine rumen microbiome. (2017)
Bensoussan L, Morais S, Dassa B, Friedman N, Henrissat B, Lombard V, Bayer EA, Mizrahi I

[Environ Microbiol] 19 : 185-197

2016

Contribution to PNA-RNA Chimera Synthesis: One Pot Microwave-Assisted Ugi Reaction to Obtain Dimeric Building Blocks (2016)
R.Ovadia, JJ. Vasseur, C. Baraguey, K. Alvarez

[Eur.J.Org.Chem.]
Functional and structural dissection of the tape measure protein of lactococcal phage TP901-1. (2016)
Mahony J, Alqarni M, Stockdale S, Spinelli S, Feyereisen M, Cambillau C, Sinderen DV

[Sci Rep] 6 : 36667
Sialylated Fetuin-A as a candidate predictive biomarker for successful grass pollen allergen immunotherapy. (2016)
Caillot N, Bouley J, Jain K, Mariano S, Luce S, Horiot S, Airouche S, Beuraud C, Beauvallet C, Devillier P, Chollet-Martin S, Kellenberger C, Mascarell L, Chabre H, Batard T, Nony E, Lombardi V, Baron-Bodo V, Moingeon P

[J Allergy Clin Immunol] 140 : 759-770
Inhibitors and Antibody Fragments as Potential Anti-Inflammatory Therapeutics Targeting Neutrophil Proteinase 3 in Human Disease. (2016)
Korkmaz B, Lesner A, Guarino C, Wysocka M, Kellenberger C, Watier H, Specks U, Gauthier F, Jenne DE

[Pharmacol Rev] 68 : 603-30
Globally distributed root endophyte Phialocephala subalpina links pathogenic and saprophytic lifestyles. (2016)
Schlegel M, Munsterkotter M, Guldener U, Bruggmann R, Duo A, Hainaut M, Henrissat B, Sieber CM, Hoffmeister D, Grunig CR

[BMC Genomics] 17 : 1015
Composting-Like Conditions Are More Efficient for Enrichment and Diversity of Organisms Containing Cellulase-Encoding Genes than Submerged Cultures. (2016)
Heiss-Blanquet S, Fayolle-Guichard F, Lombard V, Hebert A, Coutinho PM, Groppi A, Barre A, Henrissat B

[PLoS One] 11 : e0167216
Coxsackievirus B3 protease 3C: expression, purification, crystallization and preliminary structural insights. (2016)
Fili S, Valmas A, Christopoulou M, Spiliopoulou M, Nikolopoulos N, Lichiere J, logotheti S, Karavassili F, Rosmaraki E, Fitch A, Wright A, Beckers D, Degen T, Nenert G, Hilgenfeld R, Papageorgiou N, Canard B, Coutard B, Margiolaki I

[Acta Crystallogr F Struct Biol Commun] 72 : 877-884
Modulation of re-initiation of measles virus transcription at intergenic regions by PXD to NTAIL binding strength. (2016)
Bloyet LM, Brunel J, Dosnon M, Hamon V, Erales J, Gruet A, Lazert C, Bignon C, Roche P, Longhi S and Gerlier D

[PLoS Pathog] 12 : e1006058
A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility. (2016)
Desai MS, Seekatz AM, Koropatkin NM, Kamada N, Hickey CA, Wolter M, Pudlo NA, Kitamoto S, Terrapon N, Muller A, Young VB, Henrissat B, Wilmes P, Stappenbeck TS, Nunez G, Martens EC

[Cell] 167 : 1339-1353.e21
Involvement of an Arginine Triplet in M1 Matrix Protein Interaction with Membranes and in M1 Recruitment into Virus-Like Particles of the Influenza A(H1N1)pdm09 Virus. (2016)
Kerviel A, Dash S, Moncorge O, Panthu B, Prchal J, Decimo D, Ohlmann T, Lina B, Favard C, Decroly E, Ottmann M, Roingeard P, Muriaux D

[PLoS One] 11 : e0165421
DisProt 7.0: a major update of the database of disordered proteins (2016)
Piovesan D, Tabaro F, Micetic I, Necci M, Quaglia F, Oldfield C, Aspromonte MC, Norman Davey NE, Davidovic R, Dosztanyi Z, Elofsson A, Gasparini A, Hatos A, Kajava AV, Kalmar L, Leonardi E, Lazar T, Macedo-Ribeiro S, Macossay Castillo M, Meszaros A, Minervini G, Murvai N, Pujols J, Roche DB, Salladini E, Schad E, Schramm A, Szabo B, Tantos A, Tonello F, Tsirigos KD, Veljkovic N, Ventura S, Vranken W, Warholm P, Uversky VN, Dunker AK, Longhi S, Tompa P and Tosatto SCE.

[Nucleic Acid Research] 45(D1) : D219-D227
How disordered is my protein and what is its disorder for? A guide through the dark side of the protein universe. (2016)
Lieutaud P, Ferron F, Uversky AV, Kurgan L, Uversky VN and Longhi S.

[Intrinsically Disordered Proteins] 4:1 : e1259708
Current perspectives on the families of glycoside hydrolases of Mycobacterium tuberculosis: their importance and prospects for assigning function to unknowns. (2016)
van Wyk N, Drancourt M, Henrissat B, Kremer L

[Glycobiology] 27 : 112-122
Structure and specificity of the Type VI secretion system ClpV-TssC interaction in enteroaggregative Escherichia coli. (2016)
Douzi B, Brunet YR, Spinelli S, Lensi V, Legrand P, Blangy S, Kumar A, Journet L, Cascales E, Cambillau C

[Sci Rep] 6 : 34405
Filovirus proteins for antiviral drug discovery: A structure/function analysis of surface glycoproteins and virus entry. (2016)
Martin B, Hoenen T, Canard B, Decroly E

[Antiviral Res] 135 : 1-14
CAZyme content of Pochonia chlamydosporia reflects that chitin and chitosan modification are involved in nematode parasitism. (2016)
Aranda-Martinez A, Lenfant N, Escudero N, Zavala-Gonzalez EA, Henrissat B, Lopez-Llorca LV

[Environ Microbiol] 18 : 4200-4215
Conformational Flexibility of PL12 family Heparinases: Structure and Substrate Specificity of Heparinase III from Bacteroides thetaiotaomicron (BT4657). (2016)
Ulaganathan T, Shi R, Yao D, Gu RX, Garron ML, Cherney M, Tieleman DP, Sterner E, Li G, Li L, Linhardt RJ, Cygler M

[Glycobiology] 27 : 176-187
Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2. (2016)
Miettinen O, Riley R, Barry K, Cullen D, de Vries RP, Hainaut M, Hatakka A, Henrissat B, Hilden K,Kuo R, LaButti K, Lipzen A, Makela MR, Sandor L, Spatafora JW, Grigoriev IV, Hibbett DS

[Genome Announc] 4 : pii: e00976-16
Visual Comparative Omics of Fungi for Plant Biomass Deconstruction. (2016)
Miyauchi S, Navarro D, Grigoriev IV, Lipzen A, Riley R, Chevret D, Grisel S, Berrin JG, Henrissat B, Rosso MN

[Front Microbiol] 7 : 1335
The methyltransferase domain of dengue virus protein NS5 ensures efficient RNA synthesis initiation and elongation by the polymerase domain. (2016)
Potisopon S, Priet S, Collet A, Decroly E, Canard B, Selisko B

[Nucleic Acids Res] 44 : 2974
Reevaluation of possible outcomes of infections with human immunodeficiency virus. (2016)
Tamalet C, Colson P, Decroly E, Dhiver C, Ravaux I, Stein A, Raoult D

[Clin Microbiol Infect] 22 : 299-311
The Nonstructural Proteins Directing Coronavirus RNA Synthesis and Processing (2016)
Snijder E J, Decroly E, Ziebuhr J

[Adv Virus Res] 96 : 59-126
Structure-function analysis of the TssL cytoplasmic domain reveals a new interaction between the Type VI secretion baseplate and membrane complexes. (2016)
Zoued A, Cassaro CJ, Durand E, Douzi B, Espana AP, Cambillau C, Journet L, Cascales E

[J Mol Biol] 428 : 4413-4423
Characterization of prophages containing "evolved" Dit/Tal modules in the genome of Lactobacillus casei BL23. (2016)
Dieterle ME, Fina Martin J, Duran R, Nemirovsky SI, Sanchez Rivas C, Bowman C, Russell D, Hatfull GF, Cambillau C, Piuri M

[Appl Microbiol Biotechnol] 100 : 9201-9215
Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum. (2016)
Peter M, Kohler A, Ohm RA, Kuo A, Krutzmann J, Morin E, Arend M, Barry KW, Binder M, Choi C, Clum A, Copeland A, Grisel N, Haridas S, Kipfer T, LaButti K, Lindquist E, Lipzen A, Maire R, Meier B, Mihaltcheva S, Molinier V, Murat C, Poggeler S, Quandt CA, Sperisen C, Tritt A, Tisserant E, Crous PW, Henrissat B, Nehls U, Egli S, Spatafora JW, Grigoriev IV, Martin FM

[Nat Commun] 7 : 12662
The mechanism by which arabinoxylanases can recognise highly decorated xylans. (2016)
Labourel A, Crouch LI, Bras JL, Jackson A, Rogowski A, Gray J, Yadav MP, Henrissat B, Fontes CM, Gilbert HJ, Najmudin S, Basle A, Cuskin F

[J Biol Chem] 291 : 22149-22159
CAZyChip: dynamic assessment of exploration of glycoside hydrolases in microbial ecosystems. (2016)
Abot A, Arnal G, Auer L, Lazuka A, Labourdette D, Lamarre S, Trouilh L, Laville E, Lombard V, Potocki-Veronese G, Henrissat B, O'Donohue M, Hernandez-Raquet G, Dumon C, Leberre VA

[BMC Genomics] 17 : 671
The viral capping enzyme nsP1: a novel target for the inhibition of chikungunya virus infection. (2016)
Delang L, Li C, Tas A, Querat G, Albulescu IC, De Burghgraeve T, Guerrero NA, Gigante A, Piorkowski G, Decroly E, Jochmans D, Canard B, Snijder EJ, Perez-Perez MJ, van Hemert MJ, Coutard B, Leyssen P, Neyts J

[Sci Rep] 6 : 31819
Functional Exploration of the Polysaccharide Lyase Family PL6. (2016)
Mathieu S, Henrissat B, Labre F, Skjak-Braek G, Helbert W

[PLoS One] 11 : e0159415
Comparative Analysis of Secretome Profiles of Manganese(II)-Oxidizing Ascomycete Fungi. (2016)
Zeiner CA, Purvine SO, Zink EM, Pasa-Tolic L, Chaput DL, Haridas S, Wu S, LaButti K, Grigoriev IV, Henrissat B, Santelli CM, Hansel CM

[PLoS One] 11 : e0157844
Draft Genome Sequence of the Deep-Sea Ascomycetous Filamentous Fungus Cadophora malorum Mo12 from the Mid-Atlantic Ridge Reveals Its Biotechnological Potential. (2016)
Redou V, Kumar A, Hainaut M, Henrissat B, Record E, Barbier G, Burgaud G

[Genome Announc] 4
Draft Genome Sequence of the Deep-Sea Basidiomycetous Yeast Cryptococcus sp. Strain Mo29 Reveals Its Biotechnological Potential. (2016)
Redou V, Kumar A, Hainaut M, Henrissat B, Record E, Barbier G, Burgaud G

[Genome Announc] 4
Viral Macro Domains Reverse Protein ADP-ribosylation. (2016)
Li C, Debing Y, Jankevicius G, Neyts J, Ahel I, Coutard B, Canard B

[J Virol] 90 : 8478-86
Metagenomics unveils the attributes of the alginolytic guilds of sediments from four distant cold coastal environments. (2016)
Matos MN, Lozada M, Anselmino LE, Musumeci MA, Henrissat B, Jansson JK, Mac Cormack WP, Carroll J, Sjoling S, Lundgren L, Dionisi HM

[Environ Microbiol] 18 : 4471-4484
Complete Coding Sequences of Six Toscana Virus Strains Isolated from Human Patients in France. (2016)
Baklouti A, Leparc-Goffart I, Piorkowski G, Coutard B, Papageorgiou N, De Lamballerie X, Charrel RN.

[Genome Announc.] 4 : e00454-16
Single-domain flavoenzymes trigger lytic polysaccharide monooxygenases for oxidative degradation of cellulose. (2016)
Garajova S, Mathieu Y, Beccia MR, Bennati-Granier C, Biaso F, Fanuel M, Ropartz D, Guigliarelli B, Record E, Rogniaux H, Henrissat B, Berrin JG

[Sci Rep] 6 : 28276
Complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition. (2016)
Venditto I, Luis AS, Rydahl M, Schuckel J, Fernandes VO, Vidal-Melgosa S, Bule P, Goyal A, Pires VM, Dourado CG, Ferreira LM, Coutinho PM, Henrissat B, Knox JP, Basle A, Najmudin S, Gilbert HJ, Willats WG, Fontes CM

[Proc Natl Acad Sci U S A] 113 : 7136-7141
The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence. (2016)
Eves-van den Akker S, Laetsch DR, Thorpe P, Lilley CJ, Danchin EG, Da Rocha M, Rancurel C, Holroyd NE, Cotton JA, Szitenberg A, Grenier E, Montarry J, Mimee B, Duceppe MO, Boyes I, Marvin JM, Jones LM, Yusup HB, Lafond-Lapalme J, Esquibet M, Sabeh M, Rott M, Overmars H, Finkers-Tomczak A, Smant G, Koutsovoulos G, Blok V, Mantelin S, Cock PJ, Phillips W, Henrissat B, Urwin PE, Blaxter M, Jones JT

[Genome Biol] 17 : 124
Structure of the host-recognition device of Staphylococcus aureus phage varphi11. (2016)
Koc C, Xia G, Kuhner P, Spinelli S, Roussel A, Cambillau C, Stehle T

[Sci Rep] 6 : 27581
The baseplate of Lactobacillus delbrueckii bacteriophage Ld17 harbours a glycerophosphodiesterase. (2016)
Cornelissen A, Sadovskaya I, Vinogradov E, Blangy S, Spinelli S, Casey E, Mahony J, Noben JP, Dal Bello F, Cambillau C, van Sinderen D

[J Biol Chem] 291 : 16816-27
An essential role for the baseplate protein Gp45 in phage adsorption to Staphylococcus aureus. (2016)
Li X, Koc C, Kuhner P, Stierhof YD, Krismer B, Enright MC, Penades JR, Wolz C, Stehle T, Cambillau C, Peschel A, Xia G

[Sci Rep] 6 : 26455
phage TP901-1 as a model for virion assembly. (2016)
Mahony J, Stockdale SR, Collins B, Spinelli S, Douillard FP, Cambillau C, van Sinderen D

[Bacteriophage] 6 : e1123795
Genome assembly of the fungus Cochliobolus miyabeanus, and transcriptome analysis during early stages of infection on American wildrice (Zizania palustris L.). (2016)
Castell-Miller CV, Gutierrez-Gonzalez JJ, Tu ZJ, Bushley KE, Hainaut M, Henrissat B, Samac DA

[PLoS One] 11 : e0154122
Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication. (2016)
Corrochano LM, Kuo A, Marcet-Houben M, Polaino S, Salamov A, Villalobos-Escobedo JM, Grimwood J, Alvarez MI, Avalos J, Bauer D, Benito EP, Benoit I, Burger G, Camino LP, Canovas D, Cerda-Olmedo E, Cheng JF, Dominguez A, Elias M, Eslava AP, Glaser F, Gutierrez G, Heitman J, Henrissat B, Iturriaga EA, Lang BF, Lavin JL, Lee SC, Li W, Lindquist E, Lopez-Garcia S, Luque EM, Marcos AT, Martin J, McCluskey K, Medina HR, Miralles-Duran A, Miyazaki A, Munoz-Torres E, Oguiza JA, Ohm RA, Olmedo M, Orejas M, Ortiz-Castellanos L, Pisabarro AG, Rodriguez-Romero J, Ruiz-Herrera J, Ruiz-Vazquez R, Sanz C, Schackwitz W, Shahriari M, Shelest E, Silva-Franco F, Soanes D, Syed K, Tagua VG, Talbot NJ, Thon MR, Tice H, de Vries RP, Wiebenga A, Yadav JS, Braun EL, Baker SE, Garre V, Schmutz J, Horwitz BA, Torres-Martinez S, Idnurm A, Herrera-Estrella A, Gabaldon T, Grigoriev IV

[Curr Biol] 26 : 1577-1584
The mucin-degradation strategy of Ruminococcus gnavus: the importance of intramolecular trans-sialidases. (2016)
Crost EH, Tailford LE, Monestier M, Swarbreck D, Henrissat B, Crossman LC, Juge N

[Gut Microbes] 7 : 302-312
Complex Reconstitution and Characterization by Combining Co-expression Techniques in Escherichia coli with High-Throughput. (2016)
Vincentelli R, Romier C

[Adv Exp Med Biol] 896 : 43-58
Increased Gut Redox and Depletion of Anaerobic and Methanogenic Prokaryotes in Severe Acute Malnutrition. (2016)
Million M, Tidjani Alou M, Khelaifia S, Bachar D, Lagier JC, Dione N, Brah S, Hugon P, Lombard V, Armougom F, Fromonot J, Robert C, Michelle C, Diallo A, Fabre A, Guieu R, Sokhna C, Henrissat B, Parola P, Raoult D

[Sci Rep] 6 : 26051
Glycans affect DNA extraction and induce substantial differences in gut metagenomic studies. (2016)
Angelakis E, Bachar D, Henrissat B, Armougom F, Audoly G, Lagier JC, Robert C, Raoult D

[Sci Rep] 6 : 26276
The Hybrid Histidine Kinase LadS Forms a Multicomponent Signal Transduction System with the GacS/GacA Two-Component System in Pseudomonas aeruginosa. (2016)
Chambonnier G, Roux L, Redelberger D, Fadel F, Filloux A, Sivaneson M, de Bentzmann S, Bordi C

[PLoS Genet] 12 : e1006032
Mechanisms involved in xyloglucan catabolism by the cellulosome-producing bacterium Ruminiclostridium cellulolyticum. (2016)
Ravachol J, de Philip P, Borne R, Mansuelle P, Mate MJ, Perret S, Fierobe HP

[Sci Rep] 6 : 22770
In cellulo phosphorylation induces pharmacological reprogramming of maurocalcin, a cell-penetrating venom peptide. (2016)
Ronjat M, Feng W, Dardevet L, Dong Y, Al Khoury S, Chatelain FC, Vialla V, Chahboun S, Lesage F, Darbon H, Pessah IN, De Waard M.

[Proc Natl Acad Sci U S A] 113 : E2460-8
Comparative Genomic Analysis of Drechmeria coniospora Reveals Core and Specific Genetic Requirements for Fungal Endoparasitism of Nematodes. (2016)
Lebrigand K, He LD, Thakur N, Arguel MJ, Polanowska J, Henrissat B, Record E, Magdelenat G, Barbe V, Raffaele S, Barbry P, Ewbank JJ

[PLoS Genet] 12 : e1006017
Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi. (2016)
Hacquard S, Kracher B, Hiruma K, Munch PC, Garrido-Oter R, Thon MR, Weimann A, Damm U, Dallery JF, Hainaut M, Henrissat B, Lespinet O, Sacristan S, Ver Loren van Themaat E, Kemen E, McHardy AC, Schulze-Lefert P, O'Connell RJ

[Nat Commun] 7 : 11362
Xylan degradation by the human gut Bacteroides xylanisolvens XB1A(T) involves two distinct gene clusters that are linked at the transcriptional level. (2016)
Despres J, Forano E, Lepercq P, Comtet-Marre S, Jubelin G, Chambon C, Yeoman CJ, Berg Miller ME, Fields CJ, Martens E, Terrapon N, Henrissat B, White BA, Mosoni P

[BMC Genomics] 17 : 326
Understanding plant cell-wall remodelling during the symbiotic interaction between Tuber melanosporum and Corylus avellana using a carbohydrate microarray. (2016)
Sillo F, Fangel JU, Henrissat B, Faccio A, Bonfante P, Martin F, Willats WG, Balestrini R

[Planta] 244 : 347-359
Structural mimicry of receptor interaction by antagonistic IL-6 antibodies. (2016)
Blanchetot C, de Jonge N, Desmyter A, Ongenae N, Hofman E, Klarenbeek A, Sadi A, Hultberg A, Kretz-Rommel A, Spinelli S, Loris R, Cambillau C, de Haard H

[J Biol Chem] 291 : 13846-54
Relationships of human alpha/beta hydrolase fold proteins and other organophosphate-interacting proteins. (2016)
Lenfant N, Bourne Y, Marchot P, Chatonnet A

[Chem Biol Interact] 259 : 343-351
Gut bacteria that prevent growth impairments transmitted by microbiota from malnourished children. (2016)
Blanton LV, Charbonneau MR, Salih T, Barratt MJ, Venkatesh S, Ilkaveya O, Subramanian S, Manary MJ, Trehan I, Jorgensen JM, Fan YM, Henrissat B, Leyn SA, Rodionov DA, Osterman AL, Maleta KM, Newgard CB, Ashorn P, Dewey KG, Gordon JI

[Science] 351 : pii: aad3311
Combining somatic mutations present in different in vivo affinity-matured antibodies isolated from immunized Lama glama yields ultra-potent antibody therapeutics. (2016)
Klarenbeek A, Blanchetot C, Schragel G, Sadi AS, Ongenae N, Hemrika W, Wijdenes J, Spinelli S, Desmyter A, Cambillau C, Hultberg A, Kretz-Rommel A, Dreier T, De Haard HJ, Roovers RC

[Protein Eng Des Sel] 29 : 123-33
Fuzzy regions in an intrinsically disordered protein impair protein-protein interactions. (2016)
Gruet A, Dosnon M, Blocquel D, Brunel J, Gerlier D, Das RK, Bonetti D, Gianni S, Fuxreiter M, Longhi S, Bignon C

[FEBS J] 283 : 576-94
The molecular basis of polysaccharide cleavage by lytic polysaccharide monooxygenases. (2016)
Frandsen KE, Simmons TJ, Dupree P, Poulsen JN, Hemsworth GR, Ciano L, Johnston EM, Tovborg M, Johansen KS, von Freiesleben P, Marmuse L, Fort S, Cottaz S, Driguez H, Henrissat B, Lenfant N, Tuna F, Baldansuren A, Davies GJ, Lo Leggio L, Walton PH

[Nat Chem Biol] 12 : 298-303
Priming and polymerization of a bacterial contractile tail structure. (2016)
Zoued A, Durand E, Brunet YR, Spinelli S, Douzi B, Guzzo M, Flaugnatti N, Legrand P, Journet L, Fronzes R, Mignot T, Cambillau C, Cascales E

[Nature] 531 : 59-63
Unraveling the pectinolytic function of Bacteroides xylanisolvens using a RNA-seq approach and mutagenesis. (2016)
Despres J, Forano E, Lepercq P, Comtet-Marre S, Jubelin G, Yeoman CJ, Miller ME, Fields CJ, Terrapon N, Le Bourvellec C, Renard CM, Henrissat B, White BA, Mosoni P

[BMC Genomics] 17 : 147
Structural characterization of the N-terminal part of the MERS-CoV nucleocapsid by X-ray diffraction and small-angle X-ray scattering. (2016)
Papageorgiou N, Lichiere J, Baklouti A, Ferron F, Sevajol M, Canard B, Coutard B

[Acta Crystallogr D Struct Biol] 72 : 192-202
Complete Coding Sequences of Three Toscana Virus Strains Isolated from Sandflies in France. (2016)
Baklouti A, Leparc Goffard I, Piorkowski G, Coutard B, Papageorgiou N, De Lamballerie X, Charrel RN.

[Genome Announc.] 4 : e01676-15
Screening of a library of FDA-approved drugs identifies several enterovirus replicaton inhibitors that target viral protein 2C. (2016)
Ulferts R, de Boer M, van der Linden L, Bauer L, Lyoo HR, Mate MJ, Lichiere J, Canard B, Lelieveld D, Omta W, Egan D, Coutard B, van Kuppeveld FJ

[Antimicrob Agents Chemother] 60 : 2627-38
Novel 2-phenyl-5-[(E)-2-(thiophen-2-yl)ethenyl]-1,3,4-oxadiazole and 3-phenyl-5-[(E)-2-(thiophen-2-yl)ethenyl]-1,2,4-oxadiazole derivatives as dengue virus inhibitors targeting NS5 polymerase. (2016)
Benmansour F, Eydoux C, Querat G, de Lamballerie X, Canard B, Alvarez K, Guillemot JC, Barral K

[Eur J Med Chem] 109 : 146-56
The Atomic Structure of the Phage Tuc2009 Baseplate Tripod Suggests that Host Recognition Involves Two Different Carbohydrate Binding Modules. (2016)
Legrand P, Collins B, Blangy S, Murphy J, Spinelli S, Gutierrez C, Richet N, Kellenberger C, Desmyter A, Mahony J, van Sinderen D, Cambillau C

[MBio] 7 : e01781-15
The quaternary structure of a glycoside hydrolase dictates specificity towards beta-glucans. (2016)
Lafond M, Sulzenbacher G, Freyd T, Henrissat B, Berrin JG, Garron ML

[J Biol Chem] 291 : 7183-94
Cytokine Diedel and a viral homologue suppress the IMD pathway in Drosophila. (2016)
Lamiable O, Kellenberger C, Kemp C, Troxler L, Pelte N, Boutros M, Marques JT, Daeffler L, Hoffmann JA, Roussel A, Imler JL

[Proc Natl Acad Sci U S A] 113 : 698-703
Dividing the large glycoside hydrolase family 43 into subfamilies: a motivation for detailed enzyme characterization. (2016)
Mewis K, Lenfant N, Lombard V, Henrissat B

[Appl Environ Microbiol] 82 : 1686-1692
The genome of Xylona heveae provides a window into fungal endophytism. (2016)
Gazis R, Kuo A, Riley R, LaButti K, Lipzen A, Lin J, Amirebrahimi M, Hesse CN, Spatafora JW, Henrissat B, Hainaut M, Grigoriev IV, Hibbett DS

[Fungal Biol] 120 : 26-42
Steric and dynamic parameters influencing in situ cycloadditions to form triazole inhibitors with crystalline acetylcholinesterase. (2016)
Bourne Y, Sharpless KB, Taylor P, Marchot P

[J Am Chem Soc] 138 : 1611 - 1621
A phospholipase A anti-bacterial T6SS effector interacts directly with the C-terminal domain of the VgrG spike protein for delivery. (2016)
Flaugnatti N, Le TT, Canaan S, Aschtgen MS, Nguyen VS, Blangy S, Kellenberger C, Roussel A, Cambillau C, Cascales E, Journet L

[Mol Microbiol] 99 : 1099-1118
Structure-function analysis of a mixed-linkage beta-glucanase/xyloglucanase from key ruminal Bacteroidetes Prevotella bryantii B14. (2016)
McGregor N, Morar M, Fenger TH, Stogios P, Lenfant N, Yin V, Xu X, Evdokimova E, Cui H, Henrissat B, Savchenko A, Brumer H

[J Biol Chem] 291 : 1175-1197
Ectomycorrhizal fungi decompose soil organic matter using oxidative mechanisms adapted from saprotrophic ancestors. (2016)
Shah F, Nicolas C, Bentzer J, Ellstrom M, Smits M, Rineau F, Canback B, Floudas D, Carleer R, Lackner G, Braesel J, Hoffmeister D, Henrissat B, Ahren D, Johansson T, Hibbett DS, Martin F, Persson P, Tunlid A

[New Phytol] 209 : 1705-1719

2015

Quantifying domain-ligand affinities and specificities by high-throughput holdup assay. (2015)

Vincentelli R, Luck K, Poirson J, Polanowska J, Abdat J, Blemont M, Turchetto J, Iv F, Ricquier K, Straub ML, Forster A, Cassonnet P, Borg JP, Jacob Y, Masson M, Nomine Y, Reboul J, Wolff N, Charbonnier S, Trave G

Nat Methods 12 787-93
Identification of the nucleophile catalytic residue of GH51 alpha-L-arabinofuranosidase from Pleurotus ostreatus. (2015)

Amore A, Iadonisi A, Vincent F, Faraco V

AMB Express 5 79
Enhanced degradation of softwood versus hardwood by the white-rot fungus Pycnoporus coccineus. (2015)

Couturier M, Navarro D, Chevret D, Henrissat B, Piumi F, Ruiz-Duenas FJ, Martinez AT, Grigoriev IV, Riley R, Lipzen A, Berrin JG, Master ER, Rosso MN

Biotechnol Biofuels 8 216
Structure-function characterization reveals new catalytic diversity in the galactose oxidase and glyoxal oxidase family. (2015)

Yin DT, Urresti S, Lafond M, Johnston EM, Derikvand F, Ciano L, Berrin JG, Henrissat B, Walton PH, Davies GJ, Brumer H

Nat Commun 6 10197
RNA 1 and RNA 2 Genomic Segments of Chronic Bee Paralysis Virus Are Infectious and Induce Chronic Bee Paralysis Disease (2015)

Youssef I, Schurr F, Goulet A, Cougoule N, Ribiere-Chabert M, Darbon H, Thiery R, Dubois E

J Immunol Res 2015 423493
Arenavirus Glycan Shield Promotes Neutralizing Antibody Evasion and Protracted Infection. (2015)

Sommerstein R, Flatz L, Remy MM, Malinge P, Magistrelli G, Fischer N, Sahin M, Bergthaler A, Igonet S, Ter Meulen J, Rigo D, Meda P, Rabah N, Coutard B, Bowden TA, Lambert PH, Siegrist CA, Pinschewer DD

PLoS Pathog 11 e1005276
De Novo Assembly and Genome Analyses of the Marine-Derived Scopulariopsis brevicaulis Strain LF580 Unravels Life-Style Traits and Anticancerous Scopularide Biosynthetic Gene Cluster. (2015)

Kumar A, Henrissat B, Arvas M, Syed MF, Thieme N, Benz JP, Sorensen JL, Record E, Poggeler S, Kempken F

PLoS One 10 e0140398
Characterisation of Structural Proteins from Chronic Bee Paralysis Virus (CBPV) Using Mass Spectrometry. (2015)

Chevin A, Coutard B, Blanchard P, Dabert-Gay AS, Ribiere-Chabert M, Thiery R

Viruses 7 3329-44
The RNA template channel of the RNA-dependent RNA polymerase as a target for development of antiviral therapy of multiple genera within a virus family. (2015)

van der Linden L, Vives-Adrian L, Selisko B, Ferrer-Orta C, Liu X, Lanke K, Ulferts R, De Palma AM, Tanchis F, Goris N, Lefebvre D, De Clercq K, Leyssen P, Lacroix C, Purstinger G, Coutard B, Canard B, Boehr DD, Arnold JJ, Cameron CE, Verdaguer N, Neyts J, van Kuppeveld FJ

PLoS Pathog 11 e1004733
X-ray structure and activities of an essential Mononegavirales L-protein domain (2015)

Paesen G C, Collet A, Sallamand C, Debart F, Vasseur JJ, Canard B, Decroly E, Grimes J M

Nat Commun 6 8749
Synthesis and structural characterization of monomeric and dimeric peptide nucleic acids prepared by using microwave-promoted multicomponent reactions. (2015)

Ovadia R, Lebrun A, Barvik I, Vasseur JJ, Baraguey C, Alvarez K

Org Biomol Chem 13 11052-71
Deciphering genome content and evolutionary relationships of isolates from the fungus Magnaporthe oryzae attacking different host plants. (2015)

Chiapello H, Mallet L, Guerin C, Aguileta G, Amselem J, Kroj T, Ortega-Abboud E, Lebrun MH, Henrissat B, Gendrault A, Rodolphe F, Tharreau D, Fournier E

Genome Biol Evol 7 2896-2912
Unique organization of extracellular amylases into amylosomes in the resistant starch-utilizing human colonic Firmicutes bacterium Ruminococcus bromii. (2015)

Ze X, Ben David Y, Laverde-Gomez JA, Dassa B, Sheridan PO, Duncan SH, Louis P, Henrissat B, Juge N, Koropatkin NM, Bayer EA, Flint HJ

MBio 6 e01058-15
A metagenomic investigation of the duodenal microbiota reveals links with obesity. (2015)

Angelakis E, Armougom F, Carriere F, Bachar D, Laugier R, Lagier JC, Robert C, Michelle C, Henrissat B, Raoult D

PLoS One 10 e0137784
The transcriptome of Euglena gracilis reveals unexpected metabolic capabilities for carbohydrate and natural product biochemistry. (2015)

O'Neill EC, Trick M, Hill L, Rejzek M, Dusi RG, Hamilton CJ, Zimba PV, Henrissat B, Field RA

Mol Biosyst 11 2808-20
Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides. (2015)

Wu M, McNulty NP, Rodionov DA, Khoroshkin MS, Griffin NW, Cheng J, Latreille P, Kerstetter RA, Terrapon N, Henrissat B, Osterman AL, Gordon JI

Science 350 aac5992
Enzymatic synthesis of acyclic nucleoside thiophosphonate diphosphates: effect of the alpha-phosphorus configuration on HIV-1 RT activity. (2015)

Priet S, Roux L, Saez-Ayala M, Ferron F, Canard B, Alvarez K

Antiviral Res 117 122-31
Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat. (2015)

Babbitt PC, Bagos PG, Bairoch A, Bateman A, Chatonnet A, Chen MJ, Craik DJ, Finn RD, Gloriam D, Haft DH, Henrissat B, Holliday GL, Isberg V, Kaas Q, Landsman D, Lenfant N, Manning G, Nagano N, Srinivasan N, O'Donovan C, Pruitt KD, Sowdhamini R, Rawlings ND, Saier MH Jr, Sharman JL, Spedding M, Tsirigos KD, Vastermark A, Vriend G

Database (Oxford) 2015 bav063
Closely related fungi employ diverse enzymatic strategies to degrade plant biomass. (2015)

Benoit I, Culleton H, Zhou M, DiFalco M, Aguilar-Osorio G, Battaglia E, Bouzid O, Brouwer CP, El-Bushari HB, Coutinho PM, Gruben BS, Hilden KS, Houbraken J, Barboza LA, Levasseur A, Majoor E, Makela MR, Narang HM, Trejo-Aguilar B, van den Brink J, vanKuyk PA, Wiebenga A, McKie V, McCleary B, Tsang A, Henrissat B, de Vries RP

Biotechnol Biofuels 8 107
Gut microbiota richness promotes its stability upon increased dietary fiber intake in healthy adults. (2015)

Tap J, Furet JP, Bensaada M, Philippe C, Roth H, Rabot S, Lakhdari O, Lombard V, Henrissat B, Corthier G, Fontaine E, Dore J, Leclerc M

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Structure and Assembly of TP901-1 Virion Unveiled by Mutagenesis. (2015)

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Kopel M, Helbert W, Henrissat B, Doniger T, Banin E

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Navarro D, Rosso MN, Haon M, Olive C, Bonnin E, Lesage-Meessen L, Chevret D, Coutinho PM, Henrissat B, Berrin JG

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Veneault-Fourrey C, Commun C, Kohler A, Morin E, Balestrini R, Plett J, Danchin E, Coutinho P, Wiebenga A, de Vries RP, Henrissat B, Martin F

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Riley R, Salamov AA, Brown DW, Nagy LG, Floudas D, Held BW, Levasseur A, Lombard V, Morin E, Otillar R, Lindquist EA, Sun H, LaButti KM, Schmutz J, Jabbour D, Luo H, Baker SE, Pisabarro AG, Walton JD, Blanchette RA, Henrissat B, Martin F, Cullen D, Hibbett DS, Grigoriev IV

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Development of an ELISA detecting Tumor Protein 53-Induced Nuclear Protein 1 in serum of prostate cancer patients. (2013)

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Molecular Characterization of Monoclonal Antibodies that Inhibit Acetylcholinesterase by Targeting the Peripheral Site and Backdoor Region. (2013)

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Ferrara MC, Cobucci-Ponzano B, Carpentieri A, Henrissat B, Rossi M, Amoresano A, Moracci M

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Atomic Resolution Description of the Interaction between the Nucleoprotein and Phosphoprotein of Hendra Virus. (2013)

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Genomic evidence for ameiotic evolution in the bdelloid rotifer Adineta vaga . (2013)

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Functional metagenomics reveals novel pathways of prebiotic breakdown by human gut bacteria. (2013)

Cecchini DA, Laville E, Laguerre S, Robe P, Leclerc M, Dore J, Henrissat B, Remaud-Simeon M, Monsan P, Potocki-Veronese G

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Gut microbiota from twins discordant for obesity modulate metabolism in mice. (2013)

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Mining for hemicellulases in the fungus-growing termite Pseudacanthotermes militaris using functional metagenomics. (2013)

Bastien G, Arnal G, Bozonnet S, Laguerre S, Ferreira F, Faure R, Henrissat B, Lefevre F, Robe P, Bouchez O, Noirot C, Dumon C, O Donohue M

Biotechnol Biofuels 6 78
Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome. (2013)

McNulty NP, Wu M, Erickson AR, Pan C, Erickson BK, Martens EC, Pudlo NA, Muegge BD, Henrissat B, Hettich RL, Gordon JI

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Dissecting partner recognition by an intrinsically disordered protein using descriptive random mutagenesis. (2013)

Gruet A, Dosnon M, Vassena A, Lombard V, Gerlier D, Bignon C, Longhi S

J Mol Biol 425 3495-509
Genomewide analysis of polysaccharides degrading enzymes in 11 white- and brown-rot Polyporales provides insight into mechanisms of wood decay. (2013)

Hori C, Gaskell J, Igarashi K, Samejima M, Hibbett DS, Henrissat B, Cullen D

Mycologia 105(16) 1412-27
Crystallization and preliminary X-ray analysis of monalysin, a novel beta-pore-forming toxin from the entomopathogen Pseudomonas entomophila. (2013)

Blemont M, Vincentelli R, Kellenberger C, Opota O, Lemaitre B, Roussel A, Leone P

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Development of specific dengue virus 2'-O- and N7-methyltransferase assays for antiviral drug screening. (2013)

Barral K, Sallamand C, Petzold C, Coutard B, Collet A, Thillier Y, Zimmermann J, Vasseur JJ, Canard B, Rohayem J, Debart F, Decroly E

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SAMHD1 restricts the replication of human immunodeficiency virus type 1 by depleting the intracellular pool of deoxynucleoside triphosphates. (2013)

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The first structure of a mycobacteriophage, Araucaria. (2013)

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Scaltriti E, Polverini E, Grolli S, Eufemi E, Moineau S, Cambillau C, Ramoni R

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Exploring family 6 glycoside hydrolases from Podospora anserina : insights into exo- and endo-glucanase activities. (2013)

Poidevin L, Feliu J, Doan A, Berrin JG, Bey M, Coutinho PM, Henrissat B, Record E, Heiss-Blanquet S

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Bebeacua C, Lorenzo Fajardo JC, Blangy S, Spinelli S, Bollmann S, Neve H, Cambillau C, Heller KJ

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Genome of the red alga Porphyridium purpureum. (2013)

Bhattacharya D, Price DC, Xin Chan C, Qiu H, Rose N, Ball S, Weber AP, Cecilia Arias M, Henrissat B, Coutinho PM, Krishnan A, Zauner S, Morath S, Hilliou F, Egizi A, Perrineau MM, Yoon HS

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Structural and biochemical analyses of glycoside hydrolase families 5 and 26 beta-(1,4)-mannanases from Podospora anserina reveal differences upon manno-oligosaccharides catalysis. (2013)

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Characterization of salt-adapted secreted lignocellulolytic enzymes from the mangrove fungus Pestalotiopsis sp. (2013)

Arfi Y, Chevret D, Henrissat B, Berrin JG, Levasseur A, Record E

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Selective inhibitors of human neutrophil proteinase 3. (2013)

Korkmaz B, Kellenberger C, Viaud-Massuard MC, Gauthier F

Curr Pharm Des 19 966-76
Genomic Evaluation of Thermoanaerobacter spp. for the Construction of Designer Co-Cultures to Improve Lignocellulosic Biofuel Production. (2013)

Verbeke TJ, Zhang X, Henrissat B, Spicer V, Rydzak T, Krokhin OV, Fristensky B, Levin DB, Sparling R

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Viral infection modulation and neutralization by camelid nanobodies. (2013)

Desmyter A, Farenc C, Mahony J, Spinelli S, Bebeacua C, Blangy S, Veesler D, van Sinderen D, Cambillau C

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Nuclear localization of dengue virus nonstructural protein 5 does not strictly correlate with efficient viral RNA replication and inhibition of type I interferon signaling. (2013)

Kumar A, Buhler S, Selisko B, Davidson A, Mulder K, Canard B, Miller S, Bartenschlager R

J Virol 87 4545-57
Selective Serotonin Reuptake Inhibitor Fluoxetine Inhibits Replication of Human Enteroviruses B and D by Targeting Viral Protein 2C. (2013)

Ulferts R, van der Linden L, Thibaut HJ, Lanke KH, Leyssen P, Coutard B, De Palma AM, Canard B, Neyts J, van Kuppeveld FJ

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The structure of a Streptomyces avermitilis alpha-L-rhamnosidase reveals a novel carbohydrate-binding module CBM67 within the six-domain arrangement. (2013)

Fujimoto Z, Jackson A, Michikawa M, Maehara T, Momma M, Henrissat B, Gilbert HJ, Kaneko S

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Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes. (2013)

Levasseur A, Drula E, Lombard V, Coutinho PM, Henrissat B

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Comparative Genomics of a Plant-Pathogenic Fungus, Pyrenophora tritici-repentis , Reveals Transduplication and the Impact of Repeat Elements on Pathogenicity and Population Divergence. (2013)

Manning VA, Pandelova I, Dhillon B, Wilhelm LJ, Goodwin SB, Berlin AM, Figueroa M, Freitag M, Hane JK, Henrissat B, Holman WH, Kodira CD, Martin J, Oliver RP, Robbertse B, Schackwitz W, Schwartz DC, Spatafora JW, Turgeon BG, Yandava C, Young S, Zhou S, Zeng Q, Grigoriev IV, Ma LJ, Ciuffetti LM

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Structure and activity of AbiQ, a lactococcal endoribonuclease belonging to the type-III toxin-antitoxin system. (2013)

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Cello-Oligosaccharide Oxidation Reveals Differences between Two Lytic Polysaccharide Monooxygenases (Family GH61) from Podospora anserina (2013)

Bey M, Zhou S, Poidevin L, Henrissat B, Coutinho PM, Berrin JG, Sigoillot JC

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Assessing induced folding within the intrinsically disordered C-terminal domain of the Henipavirus nucleoproteins by site-directed spin labeling EPR spectroscopy. (2013)

Martinho M, Habchi J, El Habre Z, Nesme L, Guigliarelli B, Belle V, Longhi S

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Structure and function of AvtR, a novel transcriptional regulator from a hyperthermophilic archaeal lipothrixvirus. (2013)

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Visualizing a Complete Siphoviridae by Single-particle Electron Microscopy: The Structure of Lactococcal Phage TP901-1. (2013)

Bebeacua C, Lai L, Vegge CS, Brondsted L, van Heel M, Veesler D, Cambillau C

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ESTHER, the database of the alpha/beta-hydrolase fold superfamily of proteins: tools to explore diversity of functions. (2013)

Lenfant N, Hotelier T, Velluet E, Bourne Y, Marchot P, Chatonnet A

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Proteins with an alpha/beta hydrolase fold: Relationships between subfamilies in an ever-growing superfamily. (2013)

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Tissue- and ligand-specific sensing of gram-negative infection in drosophila by PGRP-LC isoforms and PGRP-LE. (2012)

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Structure of human DNase I bound to magnesium and phosphate ions points to a catalytic mechanism common to members of the DNase I-like superfamily. (2012)

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How nature can exploit nonspecific catalytic and carbohydrate binding modules to create enzymatic specificity. (2012)

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Peptidoglycan: a post-genomic analysis. (2012)

Cayrou C, Henrissat B, Gouret P, Pontarotti P, Drancourt M

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Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen dothideomycetes fungi. (2012)

Ohm RA, Feau N, Henrissat B, Schoch CL, Horwitz BA, Barry KW, Condon BJ, Copeland AC, Dhillon B, Glaser F, Hesse CN, Kosti I, Labutti K, Lindquist EA, Lucas S, Salamov AA, Bradshaw RE, Ciuffetti L, Hamelin RC, Kema GH, Lawrence C, Scott JA, Spatafora JW, Turgeon BG, de Wit PJ, Zhong S, Goodwin SB, Grigoriev IV

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RNA 3'-end mismatch excision by the severe acute respiratory syndrome coronavirus nonstructural protein nsp10 nsp14 exoribonuclease complex. (2012)

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Exploring natural fungal biodiversity from tropical and temperate forests to improve biomass conversion. (2012)

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Effects of Dietary Fiber on the Feline Gastrointestinal Metagenome. (2012)

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Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease. (2012)

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Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche. (2012)

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Transcriptome analysis of Stagonospora nodorum: gene models, effectors, metabolism and pantothenate dispensability. (2012)

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Genome sequence of the model medicinal mushroom Ganoderma lucidum. (2012)

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Genome-wide analysis of Acetivibrio cellulolyticus provides a blueprint of an elaborate cellulosome system. (2012)

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Bifidobacterium asteroides PRL2011 Genome Analysis Reveals Clues for Colonization of the Insect Gut. (2012)

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Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize. (2012)

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Eukaryote to gut bacteria transfer of a glycoside hydrolase gene essential for starch breakdown in plants. (2012)

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Functional Analysis of Family GH36 α-Galactosidases from Ruminococcus gnavus E1: Insights into the Metabolism of a Plant Oligosaccharide by a Human Gut Symbiont. (2012)

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Degradation of different pectins by fungi: correlations and contrasts between the pectinolytic enzyme sets identified in genomes and the growth on pectins of different origin. (2012)

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The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. (2012)

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Crystal structure of the DNA-bound VapBC2 antitoxin/toxin pair from Rickettsia felis. (2012)

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Structural insights into antibody sequestering and neutralizing of Na+-channel alpha-type modulator from Old-World scorpion venom. (2012)

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Flacourtosides A-F, Phenolic Glycosides Isolated from Flacourtia ramontchi. (2012)

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Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen. (2012)

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Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis. (2012)

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Synthesis of 5' cap-0 and cap-1 RNAs using solid-phase chemistry coupled with enzymatic methylation by human (guanine-N7)-methyl transferase. (2012)

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Crystal Structure of Diedel, a Marker of the Immune Response of Drosophila melanogaster. (2012)

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Carbohydrate-active enzymes revealed in Coptotermes formosanus (Isoptera: Rhinotermitidae) transcriptome. (2012)

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Single pH buffer refolding screen for protein from inclusion bodies. (2012)

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Structural biology of type VI secretion systems. (2012)

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Protein candidates for the serodiagnosis of rickettsioses. (2012)

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Protein candidates for Q fever serodiagnosis. (2012)

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A selective reversible azapeptide inhibitor of human neutrophil proteinase 3 derived from a high affinity FRET substrate. (2012)

Epinette C, Croix C, Jaquillard L, Marchand-Adam S, Kellenberger C, Lalmanach G, Cadene M, Viaud-Massuard MC, Gauthier F, Korkmaz B

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Binding of the RamR repressor to wild-type and mutated promoters of the RamA gene involved in efflux-mediated multidrug resistance in Salmonella enterica serovar Typhimurium. (2012)

Baucheron S, Coste F, Canepa S, Maurel MC, Giraud E, Culard F, Castaing B, Roussel A, Cloeckaert A

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The Measles Virus N(TAIL)-XD Complex: An Illustrative Example of Fuzziness. (2012)

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Genome analyses highlight the different biological roles of cellulases. (2012)

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Cyanophora paradoxa genome elucidates origin of photosynthesis in algae and plants. (2012)

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SAMHD1 restricts the replication of human immunodeficiency virus type 1 by depleting the intracellular pool of deoxynucleoside triphosphates. (2012)

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Compaction and binding properties of the intrinsically disordered C-terminal domain of Henipavirus nucleoprotein as unveiled by deletion studies (2012)

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Post-genomic analyses of fungal lignocellulosic biomass degradation reveal the unexpected potential of the plant pathogen Ustilago maydis. (2012)

Couturier M, Navarro D, Olive C, Chevret D, Haon M, Favel A, Lesage-Meessen L, Henrissat B, Coutinho PM, Berrin JG

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Crystal structure of Apis mellifera OBP14, a C-minus odorant-binding protein, and its complexes with odorant molecules. (2012)

Spinelli S, Lagarde A, Iovinella I, Legrand P, Tegoni M, Pelosi P, Cambillau C

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The opening of the SPP1 bacteriophage tail, a prevalent mechanism in Gram-positive-infecting siphophages. (2011)

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A thermostable GH45 endoglucanase from yeast: impact of its atypical multimodularity on activity. (2011)

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Insights into plant biomass conversion from the genome of the anaerobic thermophilic bacterium Caldicellulosiruptor bescii DSM 6725. (2011)

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Chong SL, Battaglia E, Coutinho PM, Henrissat B, Maija Tenkanen M, de Vries RP

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Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum. (2011)

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Picornavirus non-structural proteins as targets for new anti-virals with broad activity. (2011)

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Genome and transcriptome analyses of the mountain pine beetle-fungal symbiont Grosmannia clavigera, a lodgepole pine pathogen. (2011)

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Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: an highly specialized approach to carbohydrate degradation depicted at genome level. (2011)

Battaglia E, Benoit I, van den Brink J, Wiebenga A, Coutinho PM, Henrissat B, de Vries RP

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Structural insights and ab initio sequencing within the DING proteins family (2011)

Elias M, Liebschner D, Gotthard G, Chabriere E

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Podospora anserina hemicellulases potentiate Trichoderma reesei secretome for the saccharification of lignocellulosic biomass. (2011)

Couturier M, Haon M, Coutinho PM, Henrissat B, Lesage-Meessen L, Berrin JG

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Mycobacterium tuberculosis Rv1090 and Rv1987 encode functional b-glucan-targeting proteins (2011)

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Abundance and Diversity of Dockerin-Containing Proteins in the Fiber-Degrading Rumen Bacterium, Ruminococcus flavefaciens FD-1. (2010)

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Correia MA, Abbott DW, Gloster TM, Ondina Fernandes V, Prates JA, Montanier C, Dumon C, Williamson MP, Tunnicliffe RB, Liu Z, Flint J, Davies GJ, Henrissat B, Coutinho PM, Fontes CM, Gilbert HJ

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Structural Disorder within Henipavirus Nucleoprotein and Phosphoprotein: From Predictions to Experimental Assessment. (2010)

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Mammalian G protein-coupled receptor expression in Escherichia coli: II. Refolding and biophysical characterization of mouse cannabinoid receptor 1 and human parathyroid hormone receptor 1. (2010)

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Belle V, Rouger S, Costanzo S, Longhi S and Fournel A

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Genome sequence of the necrotrophic plant pathogen, Pythium ultimum, reveals original pathogenicity mechanisms and effector repertoire. (2010)

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Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins. (2010)

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Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis (2010)

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A new archaeal β-glycosidase from Sulfolobus solfataricus: Seeding a novel retaining β-glycan-specific glycoside hydrolase family along with the human non-lysosomal glucosylceramidase GBA2. (2010)

Cobucci-Ponzano B, Aurilia V, Riccio G, Henrissat B, Coutinho PM, Strazzulli A, Padula A, Corsaro MM, Pieretti G, Pocsfalvi G, Fiume I, Cannio R, Rossi M, Moracci M

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Crystal structure of Bacillus subtilis SPP1 phage gp22 shares fold similarity with a domain of lactococcal phage p2 RBP. (2010)

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Distinct oligomeric forms of the Pseudomonas aeruginosa RetS sensor domain modulate accessibility to the ligand binding site. (2010)

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Structure of lactococcal phage p2 baseplate and its mechanism of activation. (2010)

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In vitro reconstitution of SARS-coronavirus mRNA cap methylation. (2010)

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Structure of the Pseudomonas aeruginosa XcpT pseudopilin, a major component of the Type II Secretion System. (2010)

Alphonse S, Durand E, Douzi B, Waegele B, Darbon H, Filloux A, Voulhoux R, Bernard C

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ORF 157 from the Archaeal Virus AFV1 Defines a New Class of Nuclease. (2010)

Goulet A, Redder P, Pina M, Prangishvili D, Vera L, Lichiere J, Leulliot N, van Tilbeurgh H, Ortiz-Lombardia M, Campanacci V, Cambillau C

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Deciphering the function of lactococcal phage ul36 Sak domains. (2010)

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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. (2010)

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Synthesis and antiviral activity of boranophosphonate isosteres of AZT and d4T monophosphates. (2010)

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Getting the best out of long-wavelength X-rays: de novo chlorine/sulfur SAD phasing of a structural protein from ATV. (2010)

Goulet A, Vestergaard G, Felisberto-Rodrigues C, Campanacci V, Garrett RA, Cambillau C, Ortiz-Lombardia M

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Modulation of cellulosome composition in Clostridium cellulolyticum : adaptation to the polysaccharide environment revealed by proteomic and carbohydrate-active enzyme analyses. (2010)

Blouzard JC, Coutinho PM, Fierobe HP, Henrissat B, Lignon S, Tardif C, Pages S, Philip PD

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A novel alpha-N-acetylgalactosaminidase family with an NAD+-dependent catalytic mechanism suitable for enzymatic removal of blood group A antigens. (2010)

Sulzenbacher G, Liu QP, Bennett EP, Levery SB, Bourne Y, Ponchel G, Clausen H, Henrissat B

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Biochemical characterization of the (nucleoside-2\'O)-methyltransferase activity of dengue virus protein NS5 using purified capped RNA oligonucleotides 7MeGpppACn and GpppACn. (2010)

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Integrative analytical approach by capillary electrophoresis and kinetics under high pressure optimized for deciphering intrinsic and extrinsic cofactors that modulate activity and stability of human paraoxonase (PON1). (2009)

Renault F, Carus T, Clery-Barraud C, Elias M, Chabriere E, Masson P, Rochu D

J Chromatogr B Analyt Technol Biomed Life Sci 878 1349-55
Structure of the C-terminal domain of nsp4 from feline coronavirus. (2009)

Manolaridis I, Wojdyla JA, Panjikar S, Snijder EJ, Gorbalenya AE, Berglind H, Nordlund P, Coutard B, Tucker PA

Acta Crystallogr D Biol Crystallogr 65 839-46
Understanding the alphaviruses: Recent research on important emerging pathogens and progress towards their control. (2009)

Gould EA, Coutard B, Malet H, Morin B, Jamal S, Weaver S, Gorbalenya A, Moureau G, Baronti C, Delogu I, Forrester N, Khasnatinov M, Gritsun T, de Lamballerie X, Canard B

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Crystallographic structure of ubiquitin in complex with cadmium ions. (2009)

Qureshi IA, Ferron F, Seh CC, Cheung P, Lescar J

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A protein encoded by a new family of mobile elements from Euryarchaea exhibits three domains with novel folds. (2009)

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Transcriptional profiling of cellulase and expansin-related genes in a hypercellulolytic Trichoderma reesei. (2009)

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Overlapping genes produce proteins with unusual sequence properties and offer insight into de novo protein creation. (2009)

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Structure of the methyltransferase domain from the Modoc virus, a flavivirus with no known vector. (2009)

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Structure of the X (ADRP) domain of nsp3 from feline coronavirus. (2009)

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A Genomic View of Glycobiology (2009)

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beta-Glycosyl azides as substrates for alpha-glycosynthases: preparation of efficient alpha-L-fucosynthases. (2009)

Cobucci-Ponzano B, Conte F, Bedini E, Corsaro MM, Parrilli M, Sulzenbacher G, Lipski A, Dal Piaz F, Lepore L, Rossi M, Moracci M

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Crystal structure of AFV1-102, a protein from the acidianus filamentous virus 1. (2009)

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Recognition of RNA Cap in the Wesselsbron Virus NS5 Methyltransferase Domain: Implications for RNA-Capping Mechanisms in Flavivirus. (2009)

Bollati M, Milani M, Mastrangelo E, Ricagno S, Tedeschi G, Nonnis S, Decroly E, Selisko B, de Lamballerie X, Coutard B, Canard B, Bolognesi M

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First evidence for the salt-dependent folding and activity of an esterase from the halophilic archaea Haloarcula marismortui. (2009)

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Crystal structure of a chimeric receptor binding protein constructed from two lactococcal phages. (2009)

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Determination with maldi tof/tof of the extensive disulfide bonding in tarantula venom peptide PcFK1 (2009)

Combes G, Bernard C, Choi SJ, Pimentel C, Darbon H, Waidelich D, Mestivier D, Camadro JM

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Carbohydrate-active enzymes database: principles and classification of glycosyltransferases. (2009)

Coutinho PM, Rancurel C, Stam M, Bernard T, Couto F, Danchin EGJ, Henrissat B

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Bacterial glycosidases for the enzymatic removal of blood group antigens (2009)

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Acidianus filamentous virus 1 coat proteins display a helical fold spanning the filamentous archaeal viruses lineage. (2009)

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The crystal structure of ORF14 from Sulfolobus islandicus filamentous virus. (2009)

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The thermo- and acido-stable ORF-99 from the archaeal virus AFV1. (2009)

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Surfactant poloxamer 188 as a new crystallizing agent for urate oxydase (2009)

Giffard M, Delfosse V, Sciara G, Mayer C, Cambillau C, El Hajji M, Castro B, Bonnete F

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Molecular basis for galactosylation of core fucose residues in invertebrates: Identification of Caenorhabditis elegans N-glycan core α-1,6-fucoside β-1,4-galactosyltransferase GALT-1 as a member of a novel glycosyltransferase family. (2009)

Titz A, Butschi A, Henrissat B, Fan YY, Hennet T, Razzazi-Fazeli E, Hengartner MO, Wilson IB, Kuenzler M, Aebi M

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The Bifidobacterium dentium Bd1 genome sequence reflects its genetic adaptation to the human oral cavity. (2009)

Ventura M, Turroni F, Zomer A, Foroni E, Giubellini V, Bottacini F, Canchaya C, Claesson MJ, He F, Mantzourani M, Mulas L, Ferrarini A, Gao B, Delledonne M, Henrissat B, Coutinho P, Oggioni M, Gupta RS, Zhang Z, Beighton D, Fitzgerald GF, O'Toole PW, van Sinderen D

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Interaction between the sifa virulence factor and its host target skip is essential for salmonella pathogenesis. (2009)

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Structural determinants for interaction of partial agonists with acetylcholine binding protein and neuronal alpha7 nicotinic acetylcholine receptor. (2009)

Hibbs RE, Sulzenbacher G, Shi J, Talley TT, Conrod S, Kem WR, Taylor P, Marchot P, Bourne Y

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Crystal structure and function of a DARPin neutralizing inhibitor of lactococcal phage TP901-1: Comparison of DARPin and camelid VHH binding mode. (2009)

Veesler D, Dreier B, Blangy S, Lichiere J, Tremblay D, Moineau S, Spinelli S, Tegoni M, Pluckthun A, Campanacci V, Cambillau C

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The XcpV/GspI pseudopilin has a central role in the assembly of a quaternary complex within the T2SS pseudopilus. (2009)

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RNA-dependent RNA polymerases from flaviviruses and Picornaviridae. (2009)

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Monoclonal antibodies to the West Nile virus NS5 protein map to linear and conformational epitopes in the methyl transferase and RNA-dependant RNA polymerase domains. (2009)

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Rules governing selective protein carbonylation. (2009)

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Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae revealed by genome sequence analysis. (2009)

McBride MJ, Xie G, Martens EC, Lapidus A, Henrissat B, Rhodes RG, Goltsman E, Wang W, Xu J, Hunnicutt DW, Staroscik AM, Hoover TR, Cheng YQ, Stein JL

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Analysis of the Structural and Functional Diversity of Plant Cell Wall Specific Family 6 Carbohydrate Binding Modules. (2009)

Abbott DW, Ficko-Blean E, van Bueren AL, Rogowski A, Cartmell A, Coutinho PM, Henrissat B, Gilbert HJ, Boraston AB

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For Whom the Bell Tolls? DING Proteins in Health and Disease. (2009)

Berna, A; Bernier F, Chabriere E, Elias M, Scott K, Suh A

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Evidence for Phosphatase Activity of p27SJ and its Impact on the Cell Cycle (2009)

Darbinian N, Czernik M, Darbinyan A, Elias M, Chabriere E, Bonasu, S, Khalili K, Amini S

J Cell Biochem 107 400-407
Elucidation of the phosphate binding mode of DING proteins revealed by sub-Angstrom X-ray crystallography (2009)

Liebschner D, Elias M, Moniot S, Fournier B, Scott K, Jelsch C, Guillot B, Lecomte C, Chabriere E

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Structure and function of phage p2 ORF34(p2), a new type of single-stranded DNA binding protein. (2009)

Scaltriti E, Tegoni M, Rivetti C, Launay H, Masson JY, Magadan AH, Tremblay D, Moineau S, Ramoni R, Lichiere J, Campanacci V, Cambillau C, Ortiz-Lombardia M

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The genome of Nectria haematococca : contribution of supernumerary chromosomes to gene expansion. (2009)

Coleman JJ, Rounsley SD, Rodriguez-Carres M, Kuo A, Wasmann CC, Grimwood J, Schmutz J, Taga M, White GJ, Zhou S, Schwartz DC, Freitag M, Ma LJ, Danchin EG, Henrissat B, Coutinho PM, Nelson DR, Straney D, Napoli CA, Barker BM, Gribskov M, Rep M, Kroken S, Molnar I, Rensing C, Kennell JC, Zamora J, Farman ML, Selker EU, Salamov A, Shapiro H, Pangilinan J, Lindquist E, Lamers C, Grigoriev IV, Geiser DM, Covert SF, Temporini E, Vanetten HD

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Modular organization of rabies virus phosphoprotein. (2009)

Gerard FC, Ribeiro Ede A Jr, Leyrat C, Ivanov I, Blondel D, Longhi S, Ruigrok RW, Jamin M

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The Crystal Structures of Chikungunya and Venezuelan Equine Encephalitis Virus nsP3 Macro Domains Define a Conserved Adenosine Binding Pocket. (2009)

Malet H, Coutard B, Jamal S, Dutartre H, Papageorgiou N, Neuvonen M, Ahola T, Forrester N, Gould EA, Lafitte D, Ferron F, Lescar J, de Lamballerie X, Canard B

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Insecticidal peptides from the theraposid spider Brachypelma albiceps: An NMR-based model of Ba2. (2009)

Corzo G, Bernard C, Clement H, Villegas E, Bosmans F, Tytgat J, Possani LD, Darbon H, Alagon A

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Queen bee pheromone binding protein ph induced domain-swapping favors pheromone release. (2009)

Pesenti ME, Spinelli S, Bezirard V, Briand L, Pernollet JC, Campanacci V, Tegoni M, Cambillau C

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Identification of allosteric inhibitors blocking the Hepatitis C Virus polymerase NS5B in the RNA synthesis initiation step. (2009)

Betzi S, Eydoux C, Bussetta C, Blemont M, Leyssen P, Debarnot C, Ben-Rahou M, Haiech J, Hibert M, Gueritte F, Grierson DS, Romette JL, Guillemot JC, Neyts J, Alvarez K, Morelli X, Dutartre H, Canard B

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Diversity and strain specificity of plant cell wall degrading enzymes revealed by the draft genome of Ruminococcus flavefaciens FD-1. (2009)

Berg Miller ME, Antonopoulos DA, Rincon MT, Band M, Bari A, Akraiko T, Hernandez A, Thimmapuram J, Henrissat B, Coutinho PM, Borovok I, Jindou S, Lamed R, Flint HJ, Bayer EA, White BA

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Post-genomic insights into the plant polysaccharide degradation potential of Aspergillus nidulans and comparison to Aspergillus niger and Aspergillus oryzae (2009)

Coutinho PM, Andersen MR, Kolenova K, vanKuyk PA, Benoit I, Gruben BS, Trejo Aguilar B, Visser H, van Solingen P, Pakula T, Seiboth B, Battaglia E, Aguilar Osorio G, de Jong JF, Ohm RA, Aguilar M, Henrissat B, Nielsen J, Stalbrand H, de Vries RP

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Flaviviral methyltransferase/RNA interaction: structural basis for enzyme inhibition. (2009)

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The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms). (2009)

Yang JC, Madupu R, Durkin AS, Ekborg NA, Pedamallu CS, Hostetler JB, Radune D, Toms BS, Henrissat B, Coutinho PM, Schwarz S, Field L, Trindade-Silva AE, Soares CA, Elshahawi S, Hanora A, Schmidt EW, Haygood MG, Posfai J, Benner J, Madinger C, Nove J, Anton B, Chaudhary K, Foster J, Holman A, Kumar S, Lessard PA, Luyten YA, Slatko B, Wood N, Wu B, Teplitski M, Mougous JD, Ward N, Eisen JA, Badger JH, Distel DL

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The interaction between the measles virus nucleoprotein and the Interferon Regulator Factor 3 relies on a specific cellular environment. (2009)

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Interaction between the C-terminal domains of N and P proteins of measles virus investigated by NMR. (2009)

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Revised Mimivirus major capsid protein sequence reveals intron-containing gene structure and extra domain. (2009)

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A pyrazolotriazolopyrimidinamine inhibitor of bovine viral diarrhea virus replication that targets the viral RNA-dependent RNA polymerase. (2009)

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The DING family of proteins: ubiquitous in eukaryotes, but where are the genes? (2009)

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Structural determinants of the high thermal stability of SsoPox from the hyperthermophilic archeon Sulfolobus solfataricus (2009)

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Mammalian G-protein-coupled receptor expression in Escherichia coli: I. High-throughput large-scale production as inclusion bodies. (2009)

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Production and biophysical characterization of the CorA transporter from Methanosarcina mazei. (2009)

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Structural and Biochemical Analysis of Human Pathogenic Astrovirus Serine Protease at 2.0 A Resolution. (2009)

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Crystal structure of a Methyltransferase from a No-Known-Vector Flavivirus. (2009)

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