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Publications

2018

  1. Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass. (2018)
    Miyauchi S, Rancon A, Drula E, Hage H, Chaduli D, Favel A, Grisel S, Henrissat B, Herpoel-Gimbert I, Ruiz-Duenas FJ, Chevret D, Hainaut M, Lin J, Wang M, Pangilinan J, Lipzen A, Lesage-Meessen L, Navarro D, Riley R, Grigoriev IV, Zhou S, Raouche S, Rosso MN
    [Biotechnol Biofuels] 11 : 201
  2. Production of alpha-1,3-L-arabinofuranosidase active on substituted xylan does not improve compost degradation by Agaricus bisporus. (2018)
    Vos AM, Jurak E, de Gijsel P, Ohm RA, Henrissat B, Lugones LG, Kabel MA, Wosten HAB
    [PLoS One] 13 : e0201090
  3. Widespread anti-CRISPR proteins in virulent bacteriophages inhibit a range of Cas9 proteins. (2018)
    Hynes AP, Rousseau GM, Agudelo D, Goulet A, Amigues B, Loehr J, Romero DA, Fremaux C, Horvath P, Doyon Y, Cambillau C, Moineau S
    [Nat Commun] 9 : 2919
  4. The gp27-like Hub of VgrG Serves as Adaptor to Promote Hcp Tube Assembly. (2018)
    Renault MG, Zamarreno Beas J, Douzi B, Chabalier M, Zoued A, Brunet YR, Cambillau C, Journet L, Cascales E
    [J Mol Biol] in press
  5. The methyltransferase domain of the Sudan ebolavirus L protein specifically targets internal adenosines of RNA substrates, in addition to the cap structure. (2018)
    B. Martin B. Coutard T. Guez G.C. Paesen B. Canard F. Debart J.J. Vasseur J.M. Grimes E. Decroly
    [Nucleic Acids Res] : https://doi.org/10.1093/nar/gky637
  6. Genome Sequencing and analyses of Two Marine Fungi from the North Sea Unraveled a Plethora of Novel Biosynthetic Gene Clusters. (2018)
    Kumar A, Sorensen JL, Hansen FT, Arvas M, Syed MF, Hassan L, Benz JP, Record E, Henrissat B, Poggeler S, Kempken F
    [Sci Rep] 8 : 10187
  7. Talaromyces borbonicus, sp. nov., a novel fungus from biodegraded Arundo donax with potential abilities in lignocellulose conversion. (2018)
    Varriale S, Houbraken J, Granchi Z, Pepe O, Cerullo G, Ventorino V, Chin-A-Woeng T, Meijer M, Riley R, Grigoriev IV, Henrissat B, de Vries RP, Faraco V
    [Mycologia] 110 : 316-324
  8. Broad genomic sampling reveals a smut pathogenic ancestry of the fungal clade Ustilaginomycotina. (2018)
    Kijpornyongpan T, Mondo SJ, Barry K, Sandor L, Lee J, Lipzen A, Pangilinan J, LaButti K, Hainaut M, Henrissat B, Grigoriev IV, Spatafora JW, Aime MC
    [Mol Biol Evol] 35 : 1840-1854
  9. Ancient acquisition of "alginate utilization loci" by human gut microbiota. (2018)
    Mathieu S, Touvrey-Loiodice M, Poulet L, Drouillard S, Vincentelli R, Henrissat B, Skjak-Braek G, Helbert W
    [Sci Rep] 8 : 8075
  10. Genetic and enzymatic characterization of 3-O-sulfotransferase SNPs associated with Plasmodium falciparum parasitaemia. (2018)
    Nguyen NT, Vives RR, Torres M, Delauzun V, Saesen E, Roig-Zamboni V, Lortat-Jacob H, Rihet P, Bourne Y
    [Glycobiology] 28 : 534-541
  11. Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi. (2018)
    Knapp DG, Nemeth JB, Barry K, Hainaut M, Henrissat B, Johnson J, Kuo A, Lim JHP, Lipzen A, Nolan M, Ohm RA, Tamas L, Grigoriev IV, Spatafora JW, Nagy LG, Kovacs GM
    [Sci Rep] 8 : 6321
  12. Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts. (2018)
    Druzhinina IS, Chenthamara K, Zhang J, Atanasova L, Yang D, Miao Y, Rahimi MJ, Grujic M, Cai F, Pourmehdi S, Salim KA, Pretzer C, Kopchinskiy AG, Henrissat B, Kuo A, Hundley H, Wang M, Aerts A, Salamov A, Lipzen A, LaButti K, Barry K, Grigoriev IV, Shen Q, Kubicek CP
    [PLoS Genet] 14 : e1007322
  13. Draft genome sequence of the basidiomycete white-rot fungus Phlebia centrifuga (2018)
    Makela MR, Peng M, Granchi Z, Chin-A-Woeng T, Hegi R, van Pelt SI, Ahrendt S, Riley R, Hainaut M, Henrissat B, Grigoriev IV, de Vries RP, Hilden KS
    [Genome Announc] 6 : e01414-17
  14. The ectomycorrhizal basidiomycete Laccaria bicolor releases a secreted beta-1,4 endoglucanase that plays a key role in symbiosis development. (2018)
    Zhang F, Anasontzis GE, Labourel A, Champion C, Haon M, Kemppainen M, Commun C, Deveau A, Pardo A, Veneault-Fourrey C, Kohler A, Rosso MN, Henrissat B, Berrin JG, Martin F
    [New Phytol] in press
  15. Glycosyltransferase genes that cause monogenic congenital disorders of glycosylation are distinct from glycosyltransferase genes associated with complex diseases. (2018)
    Joshi HJ, Hansen L, Narimatsu Y, Freeze HH, Henrissat B, Bennett E, Wandall HH, Clausen H, Schjoldager KT
    [Glycobiology] 28 : 284-294
  16. Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection. (2018)
    Seshadri R, Leahy SC, Attwood GT, Teh KH, Lambie SC, Cookson AL, Eloe-Fadrosh EA, Pavlopoulos GA, Hadjithomas M, Varghese NJ, Paez-Espino D, Perry R, Henderson G, Creevey CJ, Terrapon N, Lapebie P, Drula E, Lombard V, Rubin E, Kyrpides NC, Henrissat B, Woyke T, Ivanova NN, Kelly WJ
    [Nat Biotechnol] 36 : 359-367
  17. A decade of Streptococcus thermophilus phage evolution in an Irish dairy plant. (2018)
    Lavelle K, Murphy J, Fitzgerald B, Lugli GA, Zomer A, Neve H, Ventura M, Franz CM, Cambillau C, van Sinderen D, Mahony J
    [Appl Environ Microbiol] in press
  18. High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis. (2018)
    Chen ECH, Morin E, Beaudet D, Noel J, Yildirir G, Ndikumana S, Charron P, St-Onge C, Giorgi J, Kruger M, Marton T, Ropars J, Grigoriev IV, Hainaut M, Henrissat B, Roux C, Martin F, Corradi N
    [New Phytol] in press
  19. An ancient family of lytic polysaccharide monooxygenases with roles in arthropod development and biomass digestion. (2018)
    Sabbadin F, Hemsworth GR, Ciano L, Henrissat B, Dupree P, Tryfona T, Marques RDS, Sweeney ST, Besser K, Elias L, Pesante G, Li Y, Dowle AA, Bates R, Gomez LD, Simister R, Davies GJ, Walton PH, Bruce NC, McQueen-Mason SJ
    [Nat Commun] 9 : 756
  20. Towards a complete structural deciphering of Type VI secretion system. (2018)
    Nguyen VS, Douzi B, Durand E, Roussel A, Cascales E, Cambillau C
    [Curr Opin Struct Biol] 49 : 77-84
  21. Structure-Function Analysis of the C-Terminal Domain of the Type VI Secretion TssB Tail Sheath Subunit. (2018)
    Douzi B, Logger L, Spinelli S, Blangy S, Cambillau C, Cascales E
    [J Mol Biol] 430 : 297-309
  22. Type IX secretion system PorM and gliding machinery GldM form arches spanning the periplasmic space. (2018)
    Leone P, Roche J, Vincent MS, Tran QH, Desmyter A, Cascales E, Kellenberger C, Cambillau C, Roussel A
    [Nat Commun] 9 : 429
  23. A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae). (2018)
    Schoville SD, Chen YH, Andersson MN, Benoit JB, Bhandari A, Bowsher JH, Brevik K, Cappelle K, Chen MM, Childers AK, Childers C, Christiaens O, Clements J, Didion EM, Elpidina EN, Engsontia P, Friedrich M, Garcia-Robles I, Gibbs RA, Goswami C, Grapputo A, Gruden K, Grynberg M, Henrissat B, Jennings EC, Jones JW, Kalsi M, Khan SA, Kumar A,Li F, Lombard V, Ma X, Martynov A, Miller NJ, Mitchell RF, Munoz-Torres M, Muszewska A, Oppert B, Palli SR, Panfilio KA, Pauchet Y, Perkin LC, Petek M, Poelchau MF, Record E, Rinehart JP, Robertson HM, Rosendale AJ, Ruiz-Arroyo VM, Smagghe G, Szendrei Z, Thomas GWC, Torson AS, Vargas Jentzsch IM, Weirauch MT, Yates AD, Yocum GD, Yoon JS, Richards S
    [Sci Rep] 8 : 1931
  24. Lytic xylan oxidases from wood-decay fungi unlock biomass degradation. (2018)
    Couturier M, Ladeveze S, Sulzenbacher G, Ciano L, Fanuel M, Moreau C, Villares A, Cathala B, Chaspoul F, Frandsen KE, Labourel A, Herpoel-Gimbert I, Grisel S, Haon M, Lenfant N, Rogniaux H, Ropartz D, Davies GJ, Rosso MN, Walton PH, Henrissat B, Berrin JG
    [Nat Chem Biol] 14 : 306-310
  25. Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans. (2018)
    Seeleuthner Y, Mondy S, Lombard V, Carradec Q, Pelletier E, Wessner M, Leconte J, Mangot JF, Poulain J, Labadie K, Logares R, Sunagawa S, de Berardinis V, Salanoubat M, Dimier C, Kandels-Lewis S, Picheral M, Searson S, Pesant S, Poulton N, Stepanauskas R, Bork P, Bowler C, Hingamp P, Sullivan MB, Iudicone D, Massana R, Aury JM, Henrissat B, Karsenti E, Jaillon O, Sieracki M, de Vargas C, Wincker P
    [Nat Commun] 9 : 310
  26. Filovirus proteins for antiviral drug discovery: Structure/function of proteins involved in assembly and budding. (2018)
    Martin B, Reynard O, Volchkov V, Decroly E
    [Antiviral Res] 150 : 183-192
  27. De novo assembly of the complex genome of Nippostrongylus brasiliensis using MinION long reads. (2018)
    Eccles D, Chandler J, Camberis M, Henrissat B, Koren S, Le Gros G, Ewbank JJ
    [BMC Biol] 16 : 6
  28. Identification of Euglena gracilis beta-1,3-glucan phosphorylase and establishment of a new glycoside hydrolase (GH) family GH149. (2018)
    Kuhaudomlarp S, Patron NJ, Henrissat B, Rejzek M, Saalbach G, Field RA
    [J Biol Chem] 293 : 2865-2876
  29. Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists. (2018)
    Martino E, Morin E, Grelet GA, Kuo A, Kohler A, Daghino S, Barry KW, Cichocki N, Clum A, Dockter RB, Hainaut M, Kuo RC, LaButti K, Lindahl BD, Lindquist EA, Lipzen A, Khouja HR, Magnuson J, Murat C, Ohm RA, Singer SW, Spatafora JW, Wang M, Veneault-Fourrey C, Henrissat B, Grigoriev IV, Martin FM, Perotto S
    [New Phytol] 217 : 1213-1229
  30. Structural and molecular basis of mismatch correction and ribavirin excision from coronavirus RNA. (2018)
    Ferron F, Subissi L, Silveira De Morais AT, Le NTT, Sevajol M, Gluais L, Decroly E, Vonrhein C, Bricogne G, Canard B, Imbert I
    [Proc Natl Acad Sci U S A] 115 : E162-E171
  31. Dietary pectic glycans are degraded by coordinated enzyme pathways in human colonic Bacteroides. (2018)
    Luis AS, Briggs J, Zhang X, Farnell B, Ndeh D, Labourel A, Basle A, Cartmell A, Terrapon N, Stott K, Lowe EC, McLean R, Shearer K, Schuckel J, Venditto I, Ralet MC, Henrissat B, Martens EC, Mosimann SC, Abbott DW, Gilbert HJ
    [Nat Microbiol] 3 : 210-219
  32. Novel carbohydrate binding modules in the surface anchored a-amylase of Eubacterium rectale provide a molecular rationale for the range of starches used by this organism in the human gut. (2018)
    Cockburn DW, Suh C, Medina KP, Duvall RM, Wawrzak Z, Henrissat B, Koropatkin NM
    [Mol Microbiol] 107 : 249-264
  33. PULDB: the expanded database of Polysaccharide Utilization Loci. (2018)
    Terrapon N, Lombard V, Drula E, Lapebie P, Al-Masaudi S, Gilbert HJ, Henrissat B
    [Nucleic Acids Res] 46 : D677-D683

2017

  1. InSiDDe: A Server for Designing Artificial Disordered Proteins. (2017)
    Schramm A, Lieutaud P, Gianni S, Longhi S, Bignon C
    [Int J Mol Sci] 19
  2. Comparative Metagenomics of Cellulose- and Poplar Hydrolysate-Degrading Microcosms from Gut Microflora of the Canadian Beaver (Castor canadensis) and North American Moose (Alces americanus) after Long-Term Enrichment. (2017)
    Wong MT, Wang W, Couturier M, Razeq FM, Lombard V, Lapebie P, Edwards EA, Terrapon N, Henrissat B, Master ER
    [Front Microbiol] 8 : 2504
  3. Hot spots for protein partnership at the surface of cholinesterases and related alpha/beta hydrolase fold proteins or domains - a structural perspective. (2017)
    Bourne Y, Marchot P
    [Molecules] 23 : 35
  4. A metagenome-derived thermostable beta-glucanase with an unusual module architecture which defines the new glycoside hydrolase family GH148. (2017)
    Angelov A, Pham VTT, Ubelacker M, Brady S, Leis B, Pill N, Brolle J, Mechelke M, Moerch M, Henrissat B, Liebl W
    [Sci Rep] 7 : 17306
  5. Pan-cellulosomics of mesophilic Clostridia: variations on a theme. (2017)
    Dassa B, Borovok I, Lombard V, Henrissat B, Lamed R, Bayer EA, Morais S
    [Microorganisms] 5 : pii: E74
  6. Structural disorder and induced folding within two cereal, ABA stress and ripening (ASR) proteins. (2017)
    Hamdi K, Salladini E, O'Brien DP, Brier S, Chenal A, Yacoubi I, Longhi S
    [Sci Rep] 7 : 15544
  7. Interfacial properties of NTAIL, an intrinsically disordered protein. (2017)
    Benarouche A, Habchi J, Cagna A, Maniti O, Girard-Egrot A, Cavalier JF, Longhi S, Carriere F
    [Biophys J] 113 : 2723-2735
  8. Partner-mediated polymorphism of an intrinsically disordered protein. (2017)
    Bignon C, Troilo F, Gianni S, Longhi S
    [J Mol Biol] 430 : 2493-2507
  9. [How is transcription reinitiation governed in measles virus?] (2017)
    Bloyet LM, Roche P, Gerlier D, Longhi S
    [Med Sci (Paris)] 33 : 843-845
  10. Ten years of CAZypedia: A living encyclopedia of carbohydrate-active enzymes. (2017)
    The CAZypedia Consortium
    [Glycobiology] 28 : 3-8
  11. Reverse chemical ecology: Olfactory proteins from the giant panda and their interactions with putative pheromones and bamboo volatiles. (2017)
    Zhu J, Arena S, Spinelli S, Liu D, Zhang G, Wei R, Cambillau C, Scaloni A, Wang G, Pelosi P
    [Proc Natl Acad Sci U S A] 114 : E9802-E9810
  12. Glycosylate and move! The glycosyltransferase Maf is involved in bacterial flagella formation. (2017)
    Sulzenbacher G, Roig-Zamboni V, Lebrun R, Guerardel Y, Murat D, Mansuelle P, Yamakawa N, Quian XX, Vincentelli R, Bourne Y, Wu LF, Alberto F
    [Environ Microbiol] 20 : 228-240
  13. Unraveling the Self-Assembly of the Pseudomonas aeruginosa XcpQ Secretin Periplasmic Domain Provides New Molecular Insights into Type II Secretion System Secreton Architecture and Dynamics. (2017)
    Douzi B, Trinh NTT, Michel-Souzy S, Desmyter A, Ball G, Barbier P, Kosta A, Durand E, Forest KT, Cambillau C, Roussel A, Voulhoux R
    [MBio] 8 : e01185-17
  14. Structure of human lysosomal acid alpha-glucosidase - a guide for the treatment of Pompe disease. (2017)
    Roig-Zamboni V, Cobucci-Ponzano B, Iacono R, Ferrara MC, Germany S, Bourne Y, Parenti G, Moracci M, Sulzenbacher G
    [Nat Commun] 8 : 1111
  15. Structural and electronic determinants of lytic polysaccharide monooxygenase reactivity on polysaccharide substrates. (2017)
    Simmons TJ, Frandsen KEH, Ciano L, Tryfona T, Lenfant N, Poulsen JC, Wilson LFL, Tandrup T, Tovborg M, Schnorr K, Johansen KS, Henrissat B, Walton PH, Lo Leggio L, Dupree P
    [Nat Commun] 8 : 1064
  16. The Henipavirus V protein is a prevalently unfolded protein with a zinc-finger domain involved in binding to DDB1. (2017)
    Salladini E, Delauzun V and Longhi S
    [Mol Biosyst] 13 : 2254-2267
  17. Feed in summer, rest in winter: microbial carbon utilization in forest topsoil. (2017)
    Zifcakova L, Vetrovsky T, Lombard V, Henrissat B, Howe A, Baldrian P
    [Microbiome] 5 : 122
  18. Unique organization and unprecedented diversity of the Bacteroides (Pseudobacteroides) cellulosolvens cellulosome system. (2017)
    Zhivin O, Dassa B, Morais S, Utturkar SM, Brown SD, Henrissat B, Lamed R, Bayer EA
    [Biotechnol Biofuels] 10 : 211
  19. The yeast Geotrichum candidum encodes functional lytic polysaccharide monooxygenases. (2017)
    Ladeveze S, Haon M, Villares A, Cathala B, Grisel S, Herpoel-Gimbert I, Henrissat B, Berrin JG
    [Biotechnol Biofuels] 10 : 215
  20. Metabolic roles of uncultivated bacterioplankton lineages in the Northern Gulf of Mexico "Dead Zone". (2017)
    Thrash JC, Seitz KW, Baker BJ, Temperton B, Gillies LE, Rabalais NN, Henrissat B, Mason OU
    [MBio] 8 : pii: e01017-17
  21. Structural and functional insights into the periplasmic detector domain of the GacS histidine kinase controlling biofilm formation in Pseudomonas aeruginosa. (2017)
    Ali-Ahmad A, Fadel F, Sebban-Kreuzer C, Ba M, Pelissier GD, Bornet O, Guerlesquin F, Bourne Y, Bordi C, Vincent F
    [Sci Rep] 7 : 11262
  22. Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis. (2017)
    Gentekaki E, Curtis BA, Stairs CW, Klimes V, Elias M, Salas-Leiva DE, Herman EK, Eme L, Arias MC, Henrissat B, Hilliou F, Klute MJ, Suga H, Malik SB, Pightling AW, Kolisko M, Rachubinski RA, Schlacht A, Soanes DM, Tsaousis AD, Archibald JM, Ball SG, Dacks JB, Clark CG, van der Giezen M, Roger AJ
    [PLoS Biol] 15 : e2003769
  23. How a Glycoside Hydrolase Recognizes a Helical Polyglucan. (2017)
    Henrissat B, Garron ML
    [Structure] 25 : 1319-1321
  24. A Genomic View of Glycobiology (2017)
    Henrissat B, Surolia A, Stanley P
    [Essentials of Glycobiology (3rd Edition)] Chapter 8 : pp. 89-98
  25. Neutralization of Human Interleukin 23 by Multivalent Nanobodies Explained by the Structure of Cytokine-Nanobody Complex. (2017)
    Desmyter A, Spinelli S, Boutton C, Saunders M, Blachetot C, de Haard H, Denecker G, Van Roy M, Cambillau C, Rommelaere H
    [Front Immunol] 8 : 884
  26. Gapless genome assembly of Colletotrichum higginsianum reveals chromosome structure and association of transposable elements with secondary metabolite gene clusters. (2017)
    Dallery JF, Lapalu N, Zampounis A, Pigne S, Luyten I, Amselem J, Wittenberg AHJ, Zhou S, de Queiroz MV, Robin GP, Auger A, Hainaut M, Henrissat B, Kim KT, Lee YH, Lespinet O, Schwartz DC, Thon MR, O'Connell RJ
    [BMC Genomics] 18 : 667
  27. Draft genome sequence of a monokaryotic model brown-rot fungus Postia (Rhodonia) placenta SB12. (2017)
    Gaskell J, Kersten P, Larrondo LF, Canessa P, Martinez D, Hibbett D, Schmoll M, Kubicek CP, Martinez AT, Yadav J, Master E, Magnuson JK, Yaver D, Berka R, Lail K, Chen C, LaButti K, Nolan M, Lipzen A, Aerts A, Riley R, Barry K, Henrissat B, Blanchette R, Grigoriev IV, Cullen D
    [Genom Data] 14 : 21-23
  28. A Triad of Crystals Sheds Light on MDGA Interference with Neuroligation. (2017)
    Thoumine O, Marchot P
    [Neuron] 95 : 729-732
  29. Preface: Cholinergic Mechanisms. (2017)
    Prado MAM, Marchot P, Silman I
    [J Neurochem] 142 Suppl 2 : 3-6
  30. Toscana virus nucleoprotein oligomer organization observed in solution. (2017)
    Baklouti A, Goulet A, Lichiere J, Canard B, Charrel RN, Ferron F, Coutard B, Papageorgiou N
    [Acta Crystallogr D Struct Biol] 73 : 650-659
  31. Host recognition by lactic acid bacterial phages. (2017)
    Mahony J, Cambillau C, van Sinderen D
    [FEMS Microbiol Rev] 41 : S16-S26
  32. Bivalent Llama Single-Domain Antibody Fragments against Tumor Necrosis Factor Have Picomolar Potencies due to Intramolecular Interactions. (2017)
    Beirnaert E, Desmyter A, Spinelli S, Lauwereys M, Aarden L, Dreier T, Loris R, Silence K, Pollet C, Cambillau C, de Haard H
    [Front Immunol] 8 : 867
  33. TssA: The cap protein of the Type VI secretion system tail. (2017)
    Zoued A, Durand E, Santin YG, Journet L, Roussel A, Cambillau C, Cascales E
    [Bioessays] in press
  34. An evolutionarily distinct family of polysaccharide lyases removes rhamnose capping of complex arabinogalactan proteins. (2017)
    Munoz-Munoz J, Cartmell A, Terrapon N, Basle A, Henrissat B, Gilbert HJ
    [J Biol Chem] 292 : 13271-13283
  35. Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation. (2017)
    Svartstrom O, Alneberg J, Terrapon N, Lombard V, de Bruijn I, Malmsten J, Dalin AM, El Muller E, Shah P, Wilmes P, Henrissat B, Aspeborg H, Andersson AF
    [ISME J] 11 : 2538-2551
  36. Comparative analysis of basidiomycete transcriptomes reveals a core set of expressed genes encoding plant biomass degrading enzymes. (2017)
    Peng M, Aguilar-Pontes MV, Hainaut M, Henrissat B, Hilden K, Makela MR, de Vries RP
    [Fungal Genet Biol] 112 : 40-46
  37. Toward the identification of viral cap-methyltransferase inhibitors by fluorescence screening assay. (2017)
    Aouadi W, Eydoux C, Coutard B, Martin B, Debart F, Vasseur JJ, Contreras JM, Morice C, Querat G, Jung ML, Canard B, Guillemot JC, Decroly E
    [Antiviral Res] 144 : 330-339
  38. Type VI secretion TssK baseplate protein exhibits structural similarity with phage receptor-binding proteins and evolved to bind the membrane complex. (2017)
    Nguyen VS, Logger L, Spinelli S, Legrand P, Huyen Pham TT, Nhung Trinh TT, Cherrak Y, Zoued A, Desmyter A, Durand E, Roussel A, Kellenberger C, Cascales E, Cambillau C
    [Nat Microbiol] 2 : 17103
  39. Antiviral activity of [1,2,3]triazolo[4,5-d]pyrimidin-7(6H)-ones against chikungunya virus targeting the viral capping nsP1. (2017)
    Gigante A, Gomez-SanJuan A, Delang L, Li C, Bueno O, Gamo AM, Priego EM, Camarasa MJ, Jochmans D, Leyssen P, Decroly E, Coutard B, Querat G, Neyts J, Perez-Perez MJ
    [Antiviral Res. ] 144 : 216-222
  40. How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans. (2017)
    Cartmell A, Lowe EC, Basle A, Firbank SJ, Ndeh DA, Murray H, Terrapon N, Lombard V, Henrissat B, Turnbull JE, Czjzek M, Gilbert HJ, Bolam DN
    [Proc Natl Acad Sci U S A] 114 : 7037-7042
  41. How order and disorder within paramyxoviral nucleoproteins and phosphoproteins orchestrate the molecular interplay of transcription and replication. (2017)
    Longhi S, Bloyet LM, Gianni S and Gerlier D.
    [Cell Mol Life Sci] 74(17) : 3091-3118
  42. Transcription and replication mechanisms of Bunyaviridae and Arenaviridae L proteins. (2017)
    Ferron F, Weber F, de la Torre JC, Reguera J
    [Virus Res] 234 : 118-134
  43. A parts list for fungal cellulosomes revealed by comparative genomics. (2017)
    Haitjema CH, Gilmore SP, Henske JK, Solomon KV, de Groot R, Kuo A, Mondo SJ, Salamov AA, LaButti K, Zhao Z, Chiniquy J, Barry K, Brewer HM, Purvine SO, Wright AT, Hainaut M, Boxma B, van Alen T, Hackstein JHP, Henrissat B, Baker SE, Grigoriev IV, O'Malley MA
    [Nat Microbiol] 2 : 17087
  44. Biochemical principles and inhibitors to interfere with viral capping pathways. (2017)
    Decroly E, Canard B
    [Curr Opin Virol] 24 : 87-96
  45. A bioinformatics analysis of 3400 lytic polysaccharide oxidases from family AA9. (2017)
    Lenfant N, Hainaut M, Terrapon N, Drula E, Lombard V, Henrissat B
    [Carbohydr Res] 448 : 166-174
  46. A Metagenomics Investigation of Carbohydrate-Active Enzymes along the Gastrointestinal Tract of Saudi Sheep. (2017)
    Al-Masaudi S, El Kaoutari A, Drula E, Al-Mehdar H, Redwan EM, Lombard V, Henrissat B
    [Front Microbiol] 8 : 666
  47. Camelid nanobodies used as crystallization chaperones for different constructs of PorM, a component of the type IX secretion system from Porphyromonas gingivalis. (2017)
    Duhoo Y, Roche J, Trinh TTN, Desmyter A, Gaubert A, Kellenberger C, Cambillau C, Roussel A, Leone P
    [Acta Crystallogr F Struct Biol Commun] 73 : 286-293
  48. Unusual active site location and catalytic apparatus in a glycoside hydrolase family. (2017)
    Munoz-Munoz J, Cartmell A, Terrapon N, Henrissat B, Gilbert HJ
    [Proc Natl Acad Sci U S A] 114 : 4936-4941
  49. Archaea: essential inhabitants of the human digestive microbiota (2017)
    Demonfort-Nkamga V, Henrissat B, Drancourt M
    [Human Microbiome Journal] 3 : 1-8
  50. Natural genomic amplification of cholinesterase genes in animals. (2017)
    Chatonnet A, Lenfant N, Marchot P, Selkirk ME
    [J Neurochem] 142 Suppl 2 : 73-81
  51. Substrate selectivity of Dengue and Zika virus NS5 polymerase towards 2'-modified nucleotide analogues. (2017)
    Potisopon S, Ferron F, Fattorini V, Selisko B, Canard B
    [Antiviral Res] 140 : 25-36
  52. The three-finger toxin fold: a multifunctional structural scaffold able to modulate cholinergic functions. (2017)
    Kessler P, Marchot P, Silva M, Servent D
    [J Neurochem] 142 Suppl 2 : 7-18
  53. Cyclic imine toxins from dinoflagellates: a growing family of potent antagonists of the nicotinic acetylcholine receptors. (2017)
    Molgo J, Marchot P, Araoz R, Benoit E, Iorga BI, Zakarian A, Taylor P, Bourne Y, Servent D
    [J Neurochem] 142 Suppl 2 : 41-51
  54. Genetic and functional characterisation of the lactococcal P335 phage-host interactions. (2017)
    Mahony J, Oliveira J, Collins B, Hanemaaijer L, Lugli GA, Neve H, Ventura M, Kouwen TR, Cambillau C, van Sinderen D
    [BMC Genomics] 18 : 146
  55. Evolved distal tail carbohydrate binding modules of Lactobacillus phage J-1: a novel type of anti-receptor widespread among lactic acid bacteria phages. (2017)
    Dieterle ME, Spinelli S, Sadovskaya I, Piuri M, Cambillau C
    [Mol Microbiol] 104 : 608-620
  56. Exploring the genomic diversity of black yeasts and relatives (Chaetothyriales, Ascomycota). (2017)
    Teixeira MM, Moreno LF, Stielow BJ, Muszewska A, Hainaut M, Gonzaga L, Abouelleil A, Patane JS, Priest M, Souza R, Young S, Ferreira KS, Zeng Q, da Cunha MM, Gladki A, Barker B, Vicente VA, de Souza EM, Almeida S, Henrissat B, Vasconcelos AT, Deng S, Voglmayr H, Moussa TA, Gorbushina A, Felipe MS, Cuomo CA, de Hoog GS
    [Stud Mycol] 86 : 1-28
  57. Complex pectin metabolism by gut bacteria reveals novel catalytic functions. (2017)
    Ndeh D, Rogowski A, Cartmell A, Luis AS, Basle A, Gray J, Venditto I, Briggs J, Zhang X, Labourel A, Terrapon N, Buffetto F, Nepogodiev S, Xiao Y, Field RA, Zhu Y, O'Neill MA, Urbanowicz BR, York WS, Davies GJ, Abbott DW, Ralet MC, Martens EC, Henrissat B, Gilbert HJ
    [Nature] 544 : 65-70
  58. Filovirus proteins for antiviral drug discovery: Structure/function bases of the replication cycle. (2017)
    Martin B, Canard B, Decroly E
    [Antiviral Res] 141 : 48-61
  59. Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus. (2017)
    de Vries RP, Riley R, Wiebenga A, Aguilar-Osorio G, Amillis S, Uchima CA, Anderluh G, Asadollahi M, Askin M, Barry K, Battaglia E, Bayram O, Benocci T, Braus-Stromeyer SA, Caldana C, Canovas D, Cerqueira GC, Chen F, Chen W, Choi C, Clum A, Dos Santos RA, Damasio AR, Diallinas G, Emri T, Fekete E, Flipphi M, Freyberg S, Gallo A, Gournas C, Habgood R, Hainaut M, Harispe ML, Henrissat B, Hilden KS, Hope R, Hossain A, Karabika E, Karaffa L, Karanyi Z, Krasevec N, Kuo A, Kusch H, LaButti K, Lagendijk EL, Lapidus A, Levasseur A, Lindquist E, Lipzen A, Logrieco AF, MacCabe A, Makela MR, Malavazi I, Melin P, Meyer V, Mielnichuk N, Miskei M, Molnar AP, Mule G, Ngan CY, Orejas M, Orosz E, Ouedraogo JP, Overkamp KM, Park HS, Perrone G, Piumi F, Punt PJ, Ram AF, Ramon A, Rauscher S, Record E, Riano-Pachon DM, Robert V, Rohrig J, Ruller R, Salamov A, Salih NS, Samson RA, Sandor E, Sanguinetti M, Schutze T, Sepcic K, Shelest E, Sherlock G, Sophianopoulou V, Squina FM, Sun H, Susca A, Todd RB, Tsang A, Unkles SE, van de Wiele N, van Rossen-Uffink D, Oliveira JV, Vesth TC, Visser J, Yu JH, Zhou M, Andersen MR, Archer DB, Baker SE, Benoit I, Brakhage AA, Braus GH, Fischer R, Frisvad JC, Goldman GH, Houbraken J, Oakley B, Pocsi I, Scazzocchio C, Seiboth B, vanKuyk PA, Wortman J, Dyer PS, Grigoriev IV
    [Genome Biol] 18 : 28
  60. Discovery of genes coding for carbohydrate-active enzyme by metagenomic analysis of lignocellulosic biomasses. (2017)
    Montella S, Ventorino V, Lombard V, Henrissat B, Pepe O, Faraco V
    [Sci Rep] 7 : 42623
  61. Characterization of a mycobacterial cellulase and its impact on biofilm- and drug-induced cellulose production. (2017)
    Van Wyk N, Navarro D, Blaise M, Berrin JG, Henrissat B, Drancourt M, Kremer L
    [Glycobiology] 27 : 392-399
  62. Characterization of the Porphyromonas gingivalis Type IX Secretion Trans-Envelope PorKLMNP Core Complex. (2017)
    Vincent MS, Canestrari MJ, Leone P, Stathopoulos J, Ize B, Zoued A, Cambillau C, Kellenberger C, Roussel A, Cascales E
    [J Biol Chem] 292 : 3252-3261
  63. Probing Conformational Changes and Interfacial Recognition Site of Lipases With Surfactants and Inhibitors. (2017)
    Mateos-Diaz E, Amara S, Roussel A, Longhi S, Cambillau C, Carriere F
    [Methods Enzymol] 583 : 279-307
  64. High-throughput expression of animal venom toxins in Escherichia coli to generate a large library of oxidized disulphide-reticulated peptides for drug discovery. (2017)
    Turchetto J*, Sequeira AF*, Ramond L*, Peysson F*, Bras JL, Saez NJ, Duhoo Y, Blemont M, Guerreiro CI, Quinton L, De Pauw E, Gilles N, Darbon H, Fontes CM, Vincentelli R
    [Microb Cell Fact] 16 : 6
  65. Gene design, fusion technology and TEV cleavage conditions influence the purification of oxidized disulphide-rich venom peptides in Escherichia coli. (2017)
    Sequeira AF*, Turchetto J*, Saez NJ, Peysson F, Ramond L, Duhoo Y, Blemont M, Fernandes VO, Gama LT, Ferreira LM, Guerreiro CI, Gilles N, Darbon H, Fontes CM, Vincentelli R
    [Microb Cell Fact] 16 : 4
  66. A fibrolytic potential in the human ileum mucosal microbiota revealed by functional metagenomic. (2017)
    Patrascu O, Beguet-Crespel F, Marinelli L, Le Chatelier E, Abraham AL, Leclerc M, Klopp C, Terrapon N, Henrissat B, Blottiere HM, Dore J, Bera-Maillet C
    [Sci Rep] 7 : 40248
  67. Comparative genomics of Mortierella elongata and its bacterial endosymbiont Mycoavidus cysteinexigens. (2017)
    Uehling J, Gryganskyi A, Hameed K, Tschaplinski T, Misztal PK, Wu S, Desiro A, Vande Pol N, Du Z, Zienkiewicz A, Zienkiewicz K, Morin E, Tisserant E, Splivallo R, Hainaut M, Henrissat B, Ohm R, Kuo A, Yan J, Lipzen A, Nolan M, LaButti K, Barry K, Goldstein AH, Labbe J, Schadt C, Tuskan G, Grigoriev I, Martin F, Vilgalys R, Bonito G
    [Environ Microbiol] 19 : 2964-2983
  68. Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels. (2017)
    Wu W, Davis RW, Tran-Gyamfi MB, Kuo A, LaButti K, Mihaltcheva S, Hundley H, Chovatia M, Lindquist E, Barry K, Grigoriev IV, Henrissat B, Gladden JM
    [Appl Microbiol Biotechnol] 101 : 2603-2618
  69. Binding of the methyl donor SAM to MERS-CoV 2' -O-methyltransferase nsp16 promotes the recruitment of the allosteric activator nsp10. (2017)
    Aouadi W, Blanjoie A, Vasseur JJ, Debart F, Canard B, Decroly E
    [J Virol] 91 : e02217-16
  70. The Zika virus methyltransferase: structure and functions for drug design perspectives. (2017)
    Coutard B, Barral K, Lichiere J, Selisko B, Martin B, Aouadi W, Ortiz Lombardia M, Debart F, Vasseur JJ, Guillemot JC, Canard B, Decroly E
    [J Virol] 91 : e02202-16
  71. The chimeric nature of the genomes of marine magnetotactic coccoid-ovoid bacteria defines a novel group of Proteobacteria. (2017)
    Ji B, Zhang SD, Zhang WJ, Rouy Z, Alberto F, Santini CL, Mangenot S, Gagnot S, Philippe N, Pradel N, Zhang L, Tempel S, Li Y, Medigue C, Henrissat B, Coutinho PM, Barbe V, Talla E, Wu LF
    [Environ Microbiol] 19 : 1103-1119
  72. NMR assignments of the GacS histidine-kinase periplasmic detection domain from Pseudomonas aeruginosa PAO1. (2017)
    Ali-Ahmad A, Bornet O, Fadel F, Bourne Y, Vincent F, Bordi C, Guerlesquin F, Sebban-Kreuzer C
    [Biomol NMR Assign] 11 : 25-28
  73. Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2 (2017)
    Ali-Ahmad A, Garron ML, Zamboni V, Lenfant N, Nurizzo D, Henrissat B, Berrin JG, Bourne Y, Vincent F
    [J Struct Biol] 197 : 227-235
  74. Broad phylogeny and functionality of cellulosomal components in the bovine rumen microbiome. (2017)
    Bensoussan L, Morais S, Dassa B, Friedman N, Henrissat B, Lombard V, Bayer EA, Mizrahi I
    [Environ Microbiol] 19 : 185-197

2016

  1. Functional and structural dissection of the tape measure protein of lactococcal phage TP901-1. (2016)
    Mahony J, Alqarni M, Stockdale S, Spinelli S, Feyereisen M, Cambillau C, Sinderen DV
    [Sci Rep] 6 : 36667
  2. Sialylated Fetuin-A as a candidate predictive biomarker for successful grass pollen allergen immunotherapy. (2016)
    Caillot N, Bouley J, Jain K, Mariano S, Luce S, Horiot S, Airouche S, Beuraud C, Beauvallet C, Devillier P, Chollet-Martin S, Kellenberger C, Mascarell L, Chabre H, Batard T, Nony E, Lombardi V, Baron-Bodo V, Moingeon P
    [J Allergy Clin Immunol] 140 : 759-770
  3. Inhibitors and Antibody Fragments as Potential Anti-Inflammatory Therapeutics Targeting Neutrophil Proteinase 3 in Human Disease. (2016)
    Korkmaz B, Lesner A, Guarino C, Wysocka M, Kellenberger C, Watier H, Specks U, Gauthier F, Jenne DE
    [Pharmacol Rev] 68 : 603-30
  4. Globally distributed root endophyte Phialocephala subalpina links pathogenic and saprophytic lifestyles. (2016)
    Schlegel M, Munsterkotter M, Guldener U, Bruggmann R, Duo A, Hainaut M, Henrissat B, Sieber CM, Hoffmeister D, Grunig CR
    [BMC Genomics] 17 : 1015
  5. Composting-Like Conditions Are More Efficient for Enrichment and Diversity of Organisms Containing Cellulase-Encoding Genes than Submerged Cultures. (2016)
    Heiss-Blanquet S, Fayolle-Guichard F, Lombard V, Hebert A, Coutinho PM, Groppi A, Barre A, Henrissat B
    [PLoS One] 11 : e0167216
  6. Coxsackievirus B3 protease 3C: expression, purification, crystallization and preliminary structural insights. (2016)
    Fili S, Valmas A, Christopoulou M, Spiliopoulou M, Nikolopoulos N, Lichiere J, logotheti S, Karavassili F, Rosmaraki E, Fitch A, Wright A, Beckers D, Degen T, Nenert G, Hilgenfeld R, Papageorgiou N, Canard B, Coutard B, Margiolaki I
    [Acta Crystallogr F Struct Biol Commun] 72 : 877-884
  7. Modulation of re-initiation of measles virus transcription at intergenic regions by PXD to NTAIL binding strength. (2016)
    Bloyet LM, Brunel J, Dosnon M, Hamon V, Erales J, Gruet A, Lazert C, Bignon C, Roche P, Longhi S and Gerlier D
    [PLoS Pathog] 12 : e1006058
  8. A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility. (2016)
    Desai MS, Seekatz AM, Koropatkin NM, Kamada N, Hickey CA, Wolter M, Pudlo NA, Kitamoto S, Terrapon N, Muller A, Young VB, Henrissat B, Wilmes P, Stappenbeck TS, Nunez G, Martens EC
    [Cell] 167 : 1339-1353.e21
  9. Involvement of an Arginine Triplet in M1 Matrix Protein Interaction with Membranes and in M1 Recruitment into Virus-Like Particles of the Influenza A(H1N1)pdm09 Virus. (2016)
    Kerviel A, Dash S, Moncorge O, Panthu B, Prchal J, Decimo D, Ohlmann T, Lina B, Favard C, Decroly E, Ottmann M, Roingeard P, Muriaux D
    [PLoS One] 11 : e0165421
  10. DisProt 7.0: a major update of the database of disordered proteins (2016)
    Piovesan D, Tabaro F, Micetic I, Necci M, Quaglia F, Oldfield C, Aspromonte MC, Norman Davey NE, Davidovic R, Dosztanyi Z, Elofsson A, Gasparini A, Hatos A, Kajava AV, Kalmar L, Leonardi E, Lazar T, Macedo-Ribeiro S, Macossay Castillo M, Meszaros A, Minervini G, Murvai N, Pujols J, Roche DB, Salladini E, Schad E, Schramm A, Szabo B, Tantos A, Tonello F, Tsirigos KD, Veljkovic N, Ventura S, Vranken W, Warholm P, Uversky VN, Dunker AK, Longhi S, Tompa P and Tosatto SCE.
    [Nucleic Acid Research] 45(D1) : D219-D227
  11. How disordered is my protein and what is its disorder for? A guide through the dark side of the protein universe. (2016)
    Lieutaud P, Ferron F, Uversky AV, Kurgan L, Uversky VN and Longhi S.
    [Intrinsically Disordered Proteins] 4:1 : e1259708
  12. Current perspectives on the families of glycoside hydrolases of Mycobacterium tuberculosis: their importance and prospects for assigning function to unknowns. (2016)
    van Wyk N, Drancourt M, Henrissat B, Kremer L
    [Glycobiology] 27 : 112-122
  13. Structure and specificity of the Type VI secretion system ClpV-TssC interaction in enteroaggregative Escherichia coli. (2016)
    Douzi B, Brunet YR, Spinelli S, Lensi V, Legrand P, Blangy S, Kumar A, Journet L, Cascales E, Cambillau C
    [Sci Rep] 6 : 34405
  14. Filovirus proteins for antiviral drug discovery: A structure/function analysis of surface glycoproteins and virus entry. (2016)
    Martin B, Hoenen T, Canard B, Decroly E
    [Antiviral Res] 135 : 1-14
  15. CAZyme content of Pochonia chlamydosporia reflects that chitin and chitosan modification are involved in nematode parasitism. (2016)
    Aranda-Martinez A, Lenfant N, Escudero N, Zavala-Gonzalez EA, Henrissat B, Lopez-Llorca LV
    [Environ Microbiol] 18 : 4200-4215
  16. Conformational Flexibility of PL12 family Heparinases: Structure and Substrate Specificity of Heparinase III from Bacteroides thetaiotaomicron (BT4657). (2016)
    Ulaganathan T, Shi R, Yao D, Gu RX, Garron ML, Cherney M, Tieleman DP, Sterner E, Li G, Li L, Linhardt RJ, Cygler M
    [Glycobiology] 27 : 176-187
  17. Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2. (2016)
    Miettinen O, Riley R, Barry K, Cullen D, de Vries RP, Hainaut M, Hatakka A, Henrissat B, Hilden K,Kuo R, LaButti K, Lipzen A, Makela MR, Sandor L, Spatafora JW, Grigoriev IV, Hibbett DS
    [Genome Announc] 4 : pii: e00976-16
  18. Visual Comparative Omics of Fungi for Plant Biomass Deconstruction. (2016)
    Miyauchi S, Navarro D, Grigoriev IV, Lipzen A, Riley R, Chevret D, Grisel S, Berrin JG, Henrissat B, Rosso MN
    [Front Microbiol] 7 : 1335
  19. The methyltransferase domain of dengue virus protein NS5 ensures efficient RNA synthesis initiation and elongation by the polymerase domain. (2016)
    Potisopon S, Priet S, Collet A, Decroly E, Canard B, Selisko B
    [Nucleic Acids Res] 44 : 2974
  20. Reevaluation of possible outcomes of infections with human immunodeficiency virus. (2016)
    Tamalet C, Colson P, Decroly E, Dhiver C, Ravaux I, Stein A, Raoult D
    [Clin Microbiol Infect] 22 : 299-311
  21. The Nonstructural Proteins Directing Coronavirus RNA Synthesis and Processing (2016)
    Snijder E J, Decroly E, Ziebuhr J
    [Adv Virus Res] 96 : 59-126
  22. Structure-function analysis of the TssL cytoplasmic domain reveals a new interaction between the Type VI secretion baseplate and membrane complexes. (2016)
    Zoued A, Cassaro CJ, Durand E, Douzi B, Espana AP, Cambillau C, Journet L, Cascales E
    [J Mol Biol] 428 : 4413-4423
  23. Characterization of prophages containing "evolved" Dit/Tal modules in the genome of Lactobacillus casei BL23. (2016)
    Dieterle ME, Fina Martin J, Duran R, Nemirovsky SI, Sanchez Rivas C, Bowman C, Russell D, Hatfull GF, Cambillau C, Piuri M
    [Appl Microbiol Biotechnol] 100 : 9201-9215
  24. Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum. (2016)
    Peter M, Kohler A, Ohm RA, Kuo A, Krutzmann J, Morin E, Arend M, Barry KW, Binder M, Choi C, Clum A, Copeland A, Grisel N, Haridas S, Kipfer T, LaButti K, Lindquist E, Lipzen A, Maire R, Meier B, Mihaltcheva S, Molinier V, Murat C, Poggeler S, Quandt CA, Sperisen C, Tritt A, Tisserant E, Crous PW, Henrissat B, Nehls U, Egli S, Spatafora JW, Grigoriev IV, Martin FM
    [Nat Commun] 7 : 12662
  25. The mechanism by which arabinoxylanases can recognise highly decorated xylans. (2016)
    Labourel A, Crouch LI, Bras JL, Jackson A, Rogowski A, Gray J, Yadav MP, Henrissat B, Fontes CM, Gilbert HJ, Najmudin S, Basle A, Cuskin F
    [J Biol Chem] 291 : 22149-22159
  26. CAZyChip: dynamic assessment of exploration of glycoside hydrolases in microbial ecosystems. (2016)
    Abot A, Arnal G, Auer L, Lazuka A, Labourdette D, Lamarre S, Trouilh L, Laville E, Lombard V, Potocki-Veronese G, Henrissat B, O'Donohue M, Hernandez-Raquet G, Dumon C, Leberre VA
    [BMC Genomics] 17 : 671
  27. The viral capping enzyme nsP1: a novel target for the inhibition of chikungunya virus infection. (2016)
    Delang L, Li C, Tas A, Querat G, Albulescu IC, De Burghgraeve T, Guerrero NA, Gigante A, Piorkowski G, Decroly E, Jochmans D, Canard B, Snijder EJ, Perez-Perez MJ, van Hemert MJ, Coutard B, Leyssen P, Neyts J
    [Sci Rep] 6 : 31819
  28. Functional Exploration of the Polysaccharide Lyase Family PL6. (2016)
    Mathieu S, Henrissat B, Labre F, Skjak-Braek G, Helbert W
    [PLoS One] 11 : e0159415
  29. Comparative Analysis of Secretome Profiles of Manganese(II)-Oxidizing Ascomycete Fungi. (2016)
    Zeiner CA, Purvine SO, Zink EM, Pasa-Tolic L, Chaput DL, Haridas S, Wu S, LaButti K, Grigoriev IV, Henrissat B, Santelli CM, Hansel CM
    [PLoS One] 11 : e0157844
  30. Draft Genome Sequence of the Deep-Sea Ascomycetous Filamentous Fungus Cadophora malorum Mo12 from the Mid-Atlantic Ridge Reveals Its Biotechnological Potential. (2016)
    Redou V, Kumar A, Hainaut M, Henrissat B, Record E, Barbier G, Burgaud G
    [Genome Announc] 4
  31. Draft Genome Sequence of the Deep-Sea Basidiomycetous Yeast Cryptococcus sp. Strain Mo29 Reveals Its Biotechnological Potential. (2016)
    Redou V, Kumar A, Hainaut M, Henrissat B, Record E, Barbier G, Burgaud G
    [Genome Announc] 4
  32. Viral Macro Domains Reverse Protein ADP-ribosylation. (2016)
    Li C, Debing Y, Jankevicius G, Neyts J, Ahel I, Coutard B, Canard B
    [J Virol] 90 : 8478-86
  33. Metagenomics unveils the attributes of the alginolytic guilds of sediments from four distant cold coastal environments. (2016)
    Matos MN, Lozada M, Anselmino LE, Musumeci MA, Henrissat B, Jansson JK, Mac Cormack WP, Carroll J, Sjoling S, Lundgren L, Dionisi HM
    [Environ Microbiol] 18 : 4471-4484
  34. Complete Coding Sequences of Six Toscana Virus Strains Isolated from Human Patients in France. (2016)
    Baklouti A, Leparc-Goffart I, Piorkowski G, Coutard B, Papageorgiou N, De Lamballerie X, Charrel RN.
    [Genome Announc.] 4 : e00454-16
  35. Single-domain flavoenzymes trigger lytic polysaccharide monooxygenases for oxidative degradation of cellulose. (2016)
    Garajova S, Mathieu Y, Beccia MR, Bennati-Granier C, Biaso F, Fanuel M, Ropartz D, Guigliarelli B, Record E, Rogniaux H, Henrissat B, Berrin JG
    [Sci Rep] 6 : 28276
  36. Complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition. (2016)
    Venditto I, Luis AS, Rydahl M, Schuckel J, Fernandes VO, Vidal-Melgosa S, Bule P, Goyal A, Pires VM, Dourado CG, Ferreira LM, Coutinho PM, Henrissat B, Knox JP, Basle A, Najmudin S, Gilbert HJ, Willats WG, Fontes CM
    [Proc Natl Acad Sci U S A] 113 : 7136-7141
  37. The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence. (2016)
    Eves-van den Akker S, Laetsch DR, Thorpe P, Lilley CJ, Danchin EG, Da Rocha M, Rancurel C, Holroyd NE, Cotton JA, Szitenberg A, Grenier E, Montarry J, Mimee B, Duceppe MO, Boyes I, Marvin JM, Jones LM, Yusup HB, Lafond-Lapalme J, Esquibet M, Sabeh M, Rott M, Overmars H, Finkers-Tomczak A, Smant G, Koutsovoulos G, Blok V, Mantelin S, Cock PJ, Phillips W, Henrissat B, Urwin PE, Blaxter M, Jones JT
    [Genome Biol] 17 : 124
  38. Structure of the host-recognition device of Staphylococcus aureus phage varphi11. (2016)
    Koc C, Xia G, Kuhner P, Spinelli S, Roussel A, Cambillau C, Stehle T
    [Sci Rep] 6 : 27581
  39. The baseplate of Lactobacillus delbrueckii bacteriophage Ld17 harbours a glycerophosphodiesterase. (2016)
    Cornelissen A, Sadovskaya I, Vinogradov E, Blangy S, Spinelli S, Casey E, Mahony J, Noben JP, Dal Bello F, Cambillau C, van Sinderen D
    [J Biol Chem] 291 : 16816-27
  40. An essential role for the baseplate protein Gp45 in phage adsorption to Staphylococcus aureus. (2016)
    Li X, Koc C, Kuhner P, Stierhof YD, Krismer B, Enright MC, Penades JR, Wolz C, Stehle T, Cambillau C, Peschel A, Xia G
    [Sci Rep] 6 : 26455
  41. phage TP901-1 as a model for virion assembly. (2016)
    Mahony J, Stockdale SR, Collins B, Spinelli S, Douillard FP, Cambillau C, van Sinderen D
    [Bacteriophage] 6 : e1123795
  42. Genome assembly of the fungus Cochliobolus miyabeanus, and transcriptome analysis during early stages of infection on American wildrice (Zizania palustris L.). (2016)
    Castell-Miller CV, Gutierrez-Gonzalez JJ, Tu ZJ, Bushley KE, Hainaut M, Henrissat B, Samac DA
    [PLoS One] 11 : e0154122
  43. Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication. (2016)
    Corrochano LM, Kuo A, Marcet-Houben M, Polaino S, Salamov A, Villalobos-Escobedo JM, Grimwood J, Alvarez MI, Avalos J, Bauer D, Benito EP, Benoit I, Burger G, Camino LP, Canovas D, Cerda-Olmedo E, Cheng JF, Dominguez A, Elias M, Eslava AP, Glaser F, Gutierrez G, Heitman J, Henrissat B, Iturriaga EA, Lang BF, Lavin JL, Lee SC, Li W, Lindquist E, Lopez-Garcia S, Luque EM, Marcos AT, Martin J, McCluskey K, Medina HR, Miralles-Duran A, Miyazaki A, Munoz-Torres E, Oguiza JA, Ohm RA, Olmedo M, Orejas M, Ortiz-Castellanos L, Pisabarro AG, Rodriguez-Romero J, Ruiz-Herrera J, Ruiz-Vazquez R, Sanz C, Schackwitz W, Shahriari M, Shelest E, Silva-Franco F, Soanes D, Syed K, Tagua VG, Talbot NJ, Thon MR, Tice H, de Vries RP, Wiebenga A, Yadav JS, Braun EL, Baker SE, Garre V, Schmutz J, Horwitz BA, Torres-Martinez S, Idnurm A, Herrera-Estrella A, Gabaldon T, Grigoriev IV
    [Curr Biol] 26 : 1577-1584
  44. The mucin-degradation strategy of Ruminococcus gnavus: the importance of intramolecular trans-sialidases. (2016)
    Crost EH, Tailford LE, Monestier M, Swarbreck D, Henrissat B, Crossman LC, Juge N
    [Gut Microbes] 7 : 302-312
  45. Complex Reconstitution and Characterization by Combining Co-expression Techniques in Escherichia coli with High-Throughput. (2016)
    Vincentelli R, Romier C
    [Adv Exp Med Biol] 896 : 43-58
  46. Increased Gut Redox and Depletion of Anaerobic and Methanogenic Prokaryotes in Severe Acute Malnutrition. (2016)
    Million M, Tidjani Alou M, Khelaifia S, Bachar D, Lagier JC, Dione N, Brah S, Hugon P, Lombard V, Armougom F, Fromonot J, Robert C, Michelle C, Diallo A, Fabre A, Guieu R, Sokhna C, Henrissat B, Parola P, Raoult D
    [Sci Rep] 6 : 26051
  47. Glycans affect DNA extraction and induce substantial differences in gut metagenomic studies. (2016)
    Angelakis E, Bachar D, Henrissat B, Armougom F, Audoly G, Lagier JC, Robert C, Raoult D
    [Sci Rep] 6 : 26276
  48. The Hybrid Histidine Kinase LadS Forms a Multicomponent Signal Transduction System with the GacS/GacA Two-Component System in Pseudomonas aeruginosa. (2016)
    Chambonnier G, Roux L, Redelberger D, Fadel F, Filloux A, Sivaneson M, de Bentzmann S, Bordi C
    [PLoS Genet] 12 : e1006032
  49. Mechanisms involved in xyloglucan catabolism by the cellulosome-producing bacterium Ruminiclostridium cellulolyticum. (2016)
    Ravachol J, de Philip P, Borne R, Mansuelle P, Mate MJ, Perret S, Fierobe HP
    [Sci Rep] 6 : 22770
  50. In cellulo phosphorylation induces pharmacological reprogramming of maurocalcin, a cell-penetrating venom peptide. (2016)
    Ronjat M, Feng W, Dardevet L, Dong Y, Al Khoury S, Chatelain FC, Vialla V, Chahboun S, Lesage F, Darbon H, Pessah IN, De Waard M.
    [Proc Natl Acad Sci U S A] 113 : E2460-8
  51. Comparative Genomic Analysis of Drechmeria coniospora Reveals Core and Specific Genetic Requirements for Fungal Endoparasitism of Nematodes. (2016)
    Lebrigand K, He LD, Thakur N, Arguel MJ, Polanowska J, Henrissat B, Record E, Magdelenat G, Barbe V, Raffaele S, Barbry P, Ewbank JJ
    [PLoS Genet] 12 : e1006017
  52. Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi. (2016)
    Hacquard S, Kracher B, Hiruma K, Munch PC, Garrido-Oter R, Thon MR, Weimann A, Damm U, Dallery JF, Hainaut M, Henrissat B, Lespinet O, Sacristan S, Ver Loren van Themaat E, Kemen E, McHardy AC, Schulze-Lefert P, O'Connell RJ
    [Nat Commun] 7 : 11362
  53. Xylan degradation by the human gut Bacteroides xylanisolvens XB1A(T) involves two distinct gene clusters that are linked at the transcriptional level. (2016)
    Despres J, Forano E, Lepercq P, Comtet-Marre S, Jubelin G, Chambon C, Yeoman CJ, Berg Miller ME, Fields CJ, Martens E, Terrapon N, Henrissat B, White BA, Mosoni P
    [BMC Genomics] 17 : 326
  54. Understanding plant cell-wall remodelling during the symbiotic interaction between Tuber melanosporum and Corylus avellana using a carbohydrate microarray. (2016)
    Sillo F, Fangel JU, Henrissat B, Faccio A, Bonfante P, Martin F, Willats WG, Balestrini R
    [Planta] 244 : 347-359
  55. Structural mimicry of receptor interaction by antagonistic IL-6 antibodies. (2016)
    Blanchetot C, de Jonge N, Desmyter A, Ongenae N, Hofman E, Klarenbeek A, Sadi A, Hultberg A, Kretz-Rommel A, Spinelli S, Loris R, Cambillau C, de Haard H
    [J Biol Chem] 291 : 13846-54
  56. Relationships of human alpha/beta hydrolase fold proteins and other organophosphate-interacting proteins. (2016)
    Lenfant N, Bourne Y, Marchot P, Chatonnet A
    [Chem Biol Interact] 259 : 343-351
  57. Gut bacteria that prevent growth impairments transmitted by microbiota from malnourished children. (2016)
    Blanton LV, Charbonneau MR, Salih T, Barratt MJ, Venkatesh S, Ilkaveya O, Subramanian S, Manary MJ, Trehan I, Jorgensen JM, Fan YM, Henrissat B, Leyn SA, Rodionov DA, Osterman AL, Maleta KM, Newgard CB, Ashorn P, Dewey KG, Gordon JI
    [Science] 351 : pii: aad3311
  58. Combining somatic mutations present in different in vivo affinity-matured antibodies isolated from immunized Lama glama yields ultra-potent antibody therapeutics. (2016)
    Klarenbeek A, Blanchetot C, Schragel G, Sadi AS, Ongenae N, Hemrika W, Wijdenes J, Spinelli S, Desmyter A, Cambillau C, Hultberg A, Kretz-Rommel A, Dreier T, De Haard HJ, Roovers RC
    [Protein Eng Des Sel] 29 : 123-33
  59. Fuzzy regions in an intrinsically disordered protein impair protein-protein interactions. (2016)
    Gruet A, Dosnon M, Blocquel D, Brunel J, Gerlier D, Das RK, Bonetti D, Gianni S, Fuxreiter M, Longhi S, Bignon C
    [FEBS J] 283 : 576-94
  60. The molecular basis of polysaccharide cleavage by lytic polysaccharide monooxygenases. (2016)
    Frandsen KE, Simmons TJ, Dupree P, Poulsen JN, Hemsworth GR, Ciano L, Johnston EM, Tovborg M, Johansen KS, von Freiesleben P, Marmuse L, Fort S, Cottaz S, Driguez H, Henrissat B, Lenfant N, Tuna F, Baldansuren A, Davies GJ, Lo Leggio L, Walton PH
    [Nat Chem Biol] 12 : 298-303
  61. Priming and polymerization of a bacterial contractile tail structure. (2016)
    Zoued A, Durand E, Brunet YR, Spinelli S, Douzi B, Guzzo M, Flaugnatti N, Legrand P, Journet L, Fronzes R, Mignot T, Cambillau C, Cascales E
    [Nature] 531 : 59-63
  62. Unraveling the pectinolytic function of Bacteroides xylanisolvens using a RNA-seq approach and mutagenesis. (2016)
    Despres J, Forano E, Lepercq P, Comtet-Marre S, Jubelin G, Yeoman CJ, Miller ME, Fields CJ, Terrapon N, Le Bourvellec C, Renard CM, Henrissat B, White BA, Mosoni P
    [BMC Genomics] 17 : 147
  63. Structural characterization of the N-terminal part of the MERS-CoV nucleocapsid by X-ray diffraction and small-angle X-ray scattering. (2016)
    Papageorgiou N, Lichiere J, Baklouti A, Ferron F, Sevajol M, Canard B, Coutard B
    [Acta Crystallogr D Struct Biol] 72 : 192-202
  64. Complete Coding Sequences of Three Toscana Virus Strains Isolated from Sandflies in France. (2016)
    Baklouti A, Leparc Goffard I, Piorkowski G, Coutard B, Papageorgiou N, De Lamballerie X, Charrel RN.
    [Genome Announc.] 4 : e01676-15
  65. Screening of a library of FDA-approved drugs identifies several enterovirus replicaton inhibitors that target viral protein 2C. (2016)
    Ulferts R, de Boer M, van der Linden L, Bauer L, Lyoo HR, Mate MJ, Lichiere J, Canard B, Lelieveld D, Omta W, Egan D, Coutard B, van Kuppeveld FJ
    [Antimicrob Agents Chemother] 60 : 2627-38
  66. Novel 2-phenyl-5-[(E)-2-(thiophen-2-yl)ethenyl]-1,3,4-oxadiazole and 3-phenyl-5-[(E)-2-(thiophen-2-yl)ethenyl]-1,2,4-oxadiazole derivatives as dengue virus inhibitors targeting NS5 polymerase. (2016)
    Benmansour F, Eydoux C, Querat G, de Lamballerie X, Canard B, Alvarez K, Guillemot JC, Barral K
    [Eur J Med Chem] 109 : 146-56
  67. The Atomic Structure of the Phage Tuc2009 Baseplate Tripod Suggests that Host Recognition Involves Two Different Carbohydrate Binding Modules. (2016)
    Legrand P, Collins B, Blangy S, Murphy J, Spinelli S, Gutierrez C, Richet N, Kellenberger C, Desmyter A, Mahony J, van Sinderen D, Cambillau C
    [MBio] 7 : e01781-15
  68. The quaternary structure of a glycoside hydrolase dictates specificity towards beta-glucans. (2016)
    Lafond M, Sulzenbacher G, Freyd T, Henrissat B, Berrin JG, Garron ML
    [J Biol Chem] 291 : 7183-94
  69. Cytokine Diedel and a viral homologue suppress the IMD pathway in Drosophila. (2016)
    Lamiable O, Kellenberger C, Kemp C, Troxler L, Pelte N, Boutros M, Marques JT, Daeffler L, Hoffmann JA, Roussel A, Imler JL
    [Proc Natl Acad Sci U S A] 113 : 698-703
  70. Dividing the large glycoside hydrolase family 43 into subfamilies: a motivation for detailed enzyme characterization. (2016)
    Mewis K, Lenfant N, Lombard V, Henrissat B
    [Appl Environ Microbiol] 82 : 1686-1692
  71. The genome of Xylona heveae provides a window into fungal endophytism. (2016)
    Gazis R, Kuo A, Riley R, LaButti K, Lipzen A, Lin J, Amirebrahimi M, Hesse CN, Spatafora JW, Henrissat B, Hainaut M, Grigoriev IV, Hibbett DS
    [Fungal Biol] 120 : 26-42
  72. Steric and dynamic parameters influencing in situ cycloadditions to form triazole inhibitors with crystalline acetylcholinesterase. (2016)
    Bourne Y, Sharpless KB, Taylor P, Marchot P
    [J Am Chem Soc] 138 : 1611 - 1621
  73. A phospholipase A anti-bacterial T6SS effector interacts directly with the C-terminal domain of the VgrG spike protein for delivery. (2016)
    Flaugnatti N, Le TT, Canaan S, Aschtgen MS, Nguyen VS, Blangy S, Kellenberger C, Roussel A, Cambillau C, Cascales E, Journet L
    [Mol Microbiol] 99 : 1099-1118
  74. Structure-function analysis of a mixed-linkage beta-glucanase/xyloglucanase from key ruminal Bacteroidetes Prevotella bryantii B14. (2016)
    McGregor N, Morar M, Fenger TH, Stogios P, Lenfant N, Yin V, Xu X, Evdokimova E, Cui H, Henrissat B, Savchenko A, Brumer H
    [J Biol Chem] 291 : 1175-1197
  75. Ectomycorrhizal fungi decompose soil organic matter using oxidative mechanisms adapted from saprotrophic ancestors. (2016)
    Shah F, Nicolas C, Bentzer J, Ellstrom M, Smits M, Rineau F, Canback B, Floudas D, Carleer R, Lackner G, Braesel J, Hoffmeister D, Henrissat B, Ahren D, Johansson T, Hibbett DS, Martin F, Persson P, Tunlid A
    [New Phytol] 209 : 1705-1719

2015

  1. Quantifying domain-ligand affinities and specificities by high-throughput holdup assay. (2015)
    Vincentelli R, Luck K, Poirson J, Polanowska J, Abdat J, Blemont M, Turchetto J, Iv F, Ricquier K, Straub ML, Forster A, Cassonnet P, Borg JP, Jacob Y, Masson M, Nomine Y, Reboul J, Wolff N, Charbonnier S, Trave G
    Nat Methods 12 787-93
  2. Identification of the nucleophile catalytic residue of GH51 alpha-L-arabinofuranosidase from Pleurotus ostreatus. (2015)
    Amore A, Iadonisi A, Vincent F, Faraco V
    AMB Express 5 79
  3. Enhanced degradation of softwood versus hardwood by the white-rot fungus Pycnoporus coccineus. (2015)
    Couturier M, Navarro D, Chevret D, Henrissat B, Piumi F, Ruiz-Duenas FJ, Martinez AT, Grigoriev IV, Riley R, Lipzen A, Berrin JG, Master ER, Rosso MN
    Biotechnol Biofuels 8 216
  4. Structure-function characterization reveals new catalytic diversity in the galactose oxidase and glyoxal oxidase family. (2015)
    Yin DT, Urresti S, Lafond M, Johnston EM, Derikvand F, Ciano L, Berrin JG, Henrissat B, Walton PH, Davies GJ, Brumer H
    Nat Commun 6 10197
  5. RNA 1 and RNA 2 Genomic Segments of Chronic Bee Paralysis Virus Are Infectious and Induce Chronic Bee Paralysis Disease (2015)
    Youssef I, Schurr F, Goulet A, Cougoule N, Ribiere-Chabert M, Darbon H, Thiery R, Dubois E
    J Immunol Res 2015 423493
  6. Arenavirus Glycan Shield Promotes Neutralizing Antibody Evasion and Protracted Infection. (2015)
    Sommerstein R, Flatz L, Remy MM, Malinge P, Magistrelli G, Fischer N, Sahin M, Bergthaler A, Igonet S, Ter Meulen J, Rigo D, Meda P, Rabah N, Coutard B, Bowden TA, Lambert PH, Siegrist CA, Pinschewer DD
    PLoS Pathog 11 e1005276
  7. De Novo Assembly and Genome Analyses of the Marine-Derived Scopulariopsis brevicaulis Strain LF580 Unravels Life-Style Traits and Anticancerous Scopularide Biosynthetic Gene Cluster. (2015)
    Kumar A, Henrissat B, Arvas M, Syed MF, Thieme N, Benz JP, Sorensen JL, Record E, Poggeler S, Kempken F
    PLoS One 10 e0140398
  8. Characterisation of Structural Proteins from Chronic Bee Paralysis Virus (CBPV) Using Mass Spectrometry. (2015)
    Chevin A, Coutard B, Blanchard P, Dabert-Gay AS, Ribiere-Chabert M, Thiery R
    Viruses 7 3329-44
  9. The RNA template channel of the RNA-dependent RNA polymerase as a target for development of antiviral therapy of multiple genera within a virus family. (2015)
    van der Linden L, Vives-Adrian L, Selisko B, Ferrer-Orta C, Liu X, Lanke K, Ulferts R, De Palma AM, Tanchis F, Goris N, Lefebvre D, De Clercq K, Leyssen P, Lacroix C, Purstinger G, Coutard B, Canard B, Boehr DD, Arnold JJ, Cameron CE, Verdaguer N, Neyts J, van Kuppeveld FJ
    PLoS Pathog 11 e1004733
  10. X-ray structure and activities of an essential Mononegavirales L-protein domain (2015)
    Paesen G C, Collet A, Sallamand C, Debart F, Vasseur JJ, Canard B, Decroly E, Grimes J M
    Nat Commun 6 8749
  11. Synthesis and structural characterization of monomeric and dimeric peptide nucleic acids prepared by using microwave-promoted multicomponent reactions. (2015)
    Ovadia R, Lebrun A, Barvik I, Vasseur JJ, Baraguey C, Alvarez K
    Org Biomol Chem 13 11052-71
  12. Deciphering genome content and evolutionary relationships of isolates from the fungus Magnaporthe oryzae attacking different host plants. (2015)
    Chiapello H, Mallet L, Guerin C, Aguileta G, Amselem J, Kroj T, Ortega-Abboud E, Lebrun MH, Henrissat B, Gendrault A, Rodolphe F, Tharreau D, Fournier E
    Genome Biol Evol 7 2896-2912
  13. Unique organization of extracellular amylases into amylosomes in the resistant starch-utilizing human colonic Firmicutes bacterium Ruminococcus bromii. (2015)
    Ze X, Ben David Y, Laverde-Gomez JA, Dassa B, Sheridan PO, Duncan SH, Louis P, Henrissat B, Juge N, Koropatkin NM, Bayer EA, Flint HJ
    MBio 6 e01058-15
  14. A metagenomic investigation of the duodenal microbiota reveals links with obesity. (2015)
    Angelakis E, Armougom F, Carriere F, Bachar D, Laugier R, Lagier JC, Robert C, Michelle C, Henrissat B, Raoult D
    PLoS One 10 e0137784
  15. The transcriptome of Euglena gracilis reveals unexpected metabolic capabilities for carbohydrate and natural product biochemistry. (2015)
    O'Neill EC, Trick M, Hill L, Rejzek M, Dusi RG, Hamilton CJ, Zimba PV, Henrissat B, Field RA
    Mol Biosyst 11 2808-20
  16. Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides. (2015)
    Wu M, McNulty NP, Rodionov DA, Khoroshkin MS, Griffin NW, Cheng J, Latreille P, Kerstetter RA, Terrapon N, Henrissat B, Osterman AL, Gordon JI
    Science 350 aac5992
  17. Enzymatic synthesis of acyclic nucleoside thiophosphonate diphosphates: effect of the alpha-phosphorus configuration on HIV-1 RT activity. (2015)
    Priet S, Roux L, Saez-Ayala M, Ferron F, Canard B, Alvarez K
    Antiviral Res 117 122-31
  18. Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat. (2015)
    Babbitt PC, Bagos PG, Bairoch A, Bateman A, Chatonnet A, Chen MJ, Craik DJ, Finn RD, Gloriam D, Haft DH, Henrissat B, Holliday GL, Isberg V, Kaas Q, Landsman D, Lenfant N, Manning G, Nagano N, Srinivasan N, O'Donovan C, Pruitt KD, Sowdhamini R, Rawlings ND, Saier MH Jr, Sharman JL, Spedding M, Tsirigos KD, Vastermark A, Vriend G
    Database (Oxford) 2015 bav063
  19. Closely related fungi employ diverse enzymatic strategies to degrade plant biomass. (2015)
    Benoit I, Culleton H, Zhou M, DiFalco M, Aguilar-Osorio G, Battaglia E, Bouzid O, Brouwer CP, El-Bushari HB, Coutinho PM, Gruben BS, Hilden KS, Houbraken J, Barboza LA, Levasseur A, Majoor E, Makela MR, Narang HM, Trejo-Aguilar B, van den Brink J, vanKuyk PA, Wiebenga A, McKie V, McCleary B, Tsang A, Henrissat B, de Vries RP
    Biotechnol Biofuels 8 107
  20. Gut microbiota richness promotes its stability upon increased dietary fiber intake in healthy adults. (2015)
    Tap J, Furet JP, Bensaada M, Philippe C, Roth H, Rabot S, Lakhdari O, Lombard V, Henrissat B, Corthier G, Fontaine E, Dore J, Leclerc M
    Environ Microbiol 17 4954-4964
  21. Structure and Assembly of TP901-1 Virion Unveiled by Mutagenesis. (2015)
    Stockdale SR, Collins B, Spinelli S, Douillard FP, Mahony J, Cambillau C, van Sinderen D
    PLoS One 10 e0131676
  22. Biogenesis and structure of a type VI secretion membrane core complex. (2015)
    Durand E, Nguyen VS, Zoued A, Logger L, Pehau-Arnaudet G, Aschtgen MS, Spinelli S, Desmyter A, Bardiaux B, Dujeancourt A, Roussel A, Cambillau C, Cascales E, Fronzes R
    Nature 523 555-560
  23. Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete Hebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis. (2015)
    Dore J, Perraud M, Dieryckx C, Kohler A, Morin E, Henrissat B, Lindquist E, Zimmermann SD, Girard V, Kuo A, Grigoriev IV, Martin F, Marmeisse R, Gay G
    New Phytol 208 1169-1187
  24. Differential gene retention as an evolutionary mechanism to generate biodiversity and adaptation in yeasts. (2015)
    Morel G, Sterck L, Swennen D, Marcet-Houben M, Onesime D, Levasseur A, Jacques N, Mallet S, Couloux A, Labadie K, Amselem J, Beckerich JM, Henrissat B, Van de Peer Y, Wincker P, Souciet JL, Gabaldon T, Tinsley CR, Casaregola S
    Sci Rep 5 11571
  25. Glycan complexity dictates microbial resource allocation in the large intestine. (2015)
    Rogowski A, Briggs JA, Mortimer JC, Tryfona T, Terrapon N, Lowe EC, Basle A, Morland C, Day AM, Zheng H, Rogers TE, Thompson P, Hawkins AR, Yadav MP, Henrissat B, Martens EC, Dupree P, Gilbert HJ, Bolam DN
    Nat Commun 6 7481
  26. Bacteriophage module reshuffling results in adaptive host range as exemplified by the baseplate model of listerial phage A118. (2015)
    Cambillau C
    Virology 484 86-92
  27. Camelid Ig V genes reveal significant human homology not seen in therapeutic target genes, providing for a powerful therapeutic antibody platform. (2015)
    Klarenbeek A, El Mazouari K, Desmyter A, Blanchetot C, Hultberg A, de Jonge N, Roovers RC, Cambillau C, Spinelli S, Del-Favero J, Verrips T, de Haard HJ, Achour I
    MAbs 7 693-706
  28. mRNA capping by Venezuelan Equine Encephalitis Virus nsP1: Functional characterization and implication for antiviral research. (2015)
    Li C, Guillen J, Rabah N, Blanjoie A, Debart F, Vasseur JJ, Canard B, Decroly E, Coutard B
    J Virol 89 8292-303
  29. Genome and Transcriptome of Clostridium phytofermentans, Catalyst for the Direct Conversion of Plant Feedstocks to Fuels. (2015)
    Petit E, Coppi MV, Hayes JC, Tolonen AC, Warnick T, Latouf WG, Amisano D, Biddle A, Mukherjee S, Ivanova N, Lykidis A, Land M, Hauser L, Kyrpides N, Henrissat B, Lau J, Schnell DJ, Church GM, Leschine SB, Blanchard JL
    PLoS One 10 e0118285
  30. Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus. (2015)
    Perlin MH, Amselem J, Fontanillas E, Toh SS, Chen Z, Goldberg J, Duplessis S, Henrissat B, Young S, Zeng Q, Aguileta G, Petit E, Badouin H, Andrews J, Razeeq D, Gabaldon T, Quesneville H, Giraud T, Hood ME, Schultz DJ, Cuomo CA
    BMC Genomics 16 461
  31. Insights into the Hendra virus NTAIL-XD complex: evidence for a parallel organization of the helical MoRE at the XD surface stabilized by a combination of hydrophobic and polar interactions. (2015)
    Erales J, Beltrandi M, Roche J, Mate M, Longhi S.
    Biochim Biophys Acta 1854 1038-1053
  32. Structural disorder within paramyxoviral nucleoproteins. (2015)
    Longhi S
    FEBS Lett 589(19 Pt A) 2649-59
  33. Marine macrocyclic imines, pinnatoxins A and G: structural determinants and functional properties to distinguish neuronal alpha7 from muscle alpha1(2)/beta/gamma/delta nAChRs (2015)
    Bourne Y, Sulzenbacher G, Radic Z, Araoz R, Reynaud M, Benoit E, Zakarian A, Servent D, Molgo J, Taylor P, Marchot P
    Structure 23 1106-1115 (Preview "From Shellfish Poisoning to Neuroscience" by Shahsavar A and Balle T, Structure 23, 979-980.)
  34. X-ray and Cryo-electron Microscopy Structures of Monalysin Pore Forming Toxin Reveals Multimerization of the Pro-Form. (2015)
    Leone P, Bebeacua C, Opota O, Kellenberger C, Klaholz B, Orlov I, Cambillau C, Lemaitre B, Roussel A
    J Biol Chem 290 13191-13201
  35. Key challenges for the creation and maintenance of specialist protein resources. (2015)
    Holliday GL, Bairoch A, Bagos PG, Chatonnet A, Craik DJ, Flinn RD, Henrissat B, Landsman D, Manning G, Nagano N, O'Donovan C, Pruitt KD, Rawlings ND, Saier M, Sowdhamini R, Spedding M, Srinivasan N, Vriend G, Babbitt PC, Bateman A
    Proteins 83 1005-1013
  36. Inhibition of Type VI Secretion by an Anti-TssM Llama Nanobody. (2015)
    Nguyen VS, Logger L, Spinelli S, Desmyter A, Le TT, Kellenberger C, Douzi B, Durand E, Roussel A, Cascales E, Cambillau C
    PLoS One 10 e0122187
  37. The targeted recognition of Lactococcus lactis phages to their polysaccharide receptors. (2015)
    McCabe O, Spinelli S, Farenc C, Labbe M, Tremblay D, Blangy S, Oscarson S, Moineau S, Cambillau C
    Mol Microbiol 96 875-886
  38. Demonstration of a Folding after Binding Mechanism in the Recognition between the Measles Virus NTAIL and X Domains (2015)
    Dosnon M, Bonetti D, Morrone A, Erales J, di Silvio E, Longhi S, Gianni S
    ACS Chem Biol 10 795-802
  39. Production, crystallization and X-ray diffraction analysis of a complex between a fragment of the TssM T6SS protein and a camelid nanobody. (2015)
    Nguyen VS, Spinelli S, Desmyter A, Le TT, Kellenberger C, Cascales E, Cambillau C, Roussel A
    Acta Crystallogr F Struct Biol Commun 71 266-71
  40. Crystallization and preliminary X-ray analysis of the C-terminal fragment of PorM, a subunit of the Porphyromonas gingivalis type IX secretion system. (2015)
    Stathopulos J, Cambillau C, Cascales E, Roussel A, Leone P
    Acta Crystallogr F Struct Biol Commun 71 71-4
  41. Camelid nanobodies: killing two birds with one stone. (2015)
    Desmyter A, Spinelli S, Roussel A, Cambillau C
    Curr Opin Struct Biol 32C 1-8
  42. Structural and biochemical characterization of the beta-N-acetylglucosaminidase from Thermotoga maritima: Toward rationalization of mechanistic knowledge in the GH73 family. (2015)
    Lipski A, Herve M, Lombard V, Nurizzo D, Mengin-Lecreulx D, Bourne Y, Vincent F
    Glycobiology 25 319-330
  43. Structural and biophysical analysis of sequence insertions in the Venezuelan Equine Encephalitis Virus macro domain. (2015)
    Guillen J, Lichiere J, Rabah N, Beitzel BF, Canard B, Coutard B
    Virus Res 201 94-100
  44. Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen. (2015)
    Dhillon B, Feau N, Aerts AL, Beauseigle S, Bernier L, Copeland A, Foster A, Gill N, Henrissat B, Herath P, LaButti KM, Levasseur A, Lindquist EA, Majoor E, Ohm RA, Pangilinan JL, Pribowo A, Saddler JN, Sakalidis ML, de Vries RP, Grigoriev IV, Goodwin SB, Tanguay P, Hamelin RC
    Proc Natl Acad Sci U S A 112 3451-3456
  45. Structural basis for carbohydrate binding properties of a plant chitinase-like agglutinin with conserved catalytic machinery. (2015)
    Sulzenbacher G, Roig-Zamboni V, Peumans WJ, Henrissat B, van Damme EJM, Bourne Y
    J Struct Biol 190 115-121
  46. Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists. (2015)
    Kohler A, Kuo A, Nagy LG, Morin E, Barry KW, Buscot F, Canback B, Choi C, Cichocki N, Clum A, Colpaert J, Copeland A, Costa MD, Dore J, Floudas D, Gay G, Girlanda M, Henrissat B, Herrmann S, Hess J, Hogberg N, Johansson T, Khouja HR, LaButti K, Lahrmann U, Levasseur A, Lindquist EA, Lipzen A, Marmeisse R, Martino E, Murat C, Ngan CY, Nehls U, Plett JM, Pringle A, Ohm RA, Perotto S, Peter M, Riley R, Rineau F, Ruytinx J, Salamov A, Shah F, Sun H, Tarkka M, Tritt A, Veneault-Fourrey C, Zuccaro A, Mycorrhizal Genomics Initiative Consortium, Tunlid A, Grigoriev IV, Hibbett DS, Martin F
    Nat Genet 47 410-415
  47. A Flexible Extension of the Drosophila Ultrabithorax Homeodomain Defines a Novel Hox/PBC Interaction Mode. (2015)
    Foos N, Maurel-Zaffran C, Mate MJ, Vincentelli R, Hainaut M, Berenger H, Pradel J, Saurin AJ, Ortiz-Lombardia M, Graba Y
    Structure 23 270-279
  48. Dynamics of the intrinsically disordered C-terminal domain of the nipah virus nucleoprotein and interaction with the x domain of the phosphoprotein as unveiled by NMR spectroscopy. (2015)
    Baronti L, Erales J, Habchi J, Felli IC, Pierattelli R, Longhi S
    Chembiochem 16 268-76
  49. Molecular Basis for Structural Heterogeneity of an Intrinsically Disordered Protein Bound to a Partner by Combined ESI-IM-MS and Modeling. (2015)
    D'Urzo A, Konijnenberg A, Rossetti G, Habchi J, Li J, Carloni P, Sobott F, Longhi S, Grandori R
    J Am Soc Mass Spectrom 26 472-481
  50. Insights into the coiled-coil organization of the Hendra virus phosphoprotein from combined biochemical and SAXS studies (2015)
    Beltrandi M, Blocquel D, Erales J, Barbier P, Cavalli A and Longhi S.
    Virology 477 42-55
  51. Structure and boosting activity of a starch-degrading lytic polysaccharide monooxygenase. (2015)
    Lo Leggio L, Simmons TJ, Poulsen JC, Frandsen KE, Hemsworth GR, Stringer MA, von Freiesleben P, Tovborg M, Johansen KS, De Maria L, Harris PV, Soong CL, Dupree P, Tryfona T, Lenfant N, Henrissat B, Davies GJ, Walton PH
    Nat Commun 6 5961
  52. Insights on the Evolution of Mycoparasitism from the Genome of Clonostachys rosea. (2015)
    Karlsson M, Durling MB, Choi J, Kosawang C, Lackner G, Tzelepis GD, Nygren K, Dubey MK, Kamou N, Levasseur A, Zapparata A, Wang J, Amby DB, Jensen B, Sarrocco S, Panteris E, Lagopodi AL, Poggeler S, Vannacci G, Collinge DB, Hoffmeister D, Henrissat B, Lee YH, Jensen DF
    Genome Biol Evol 7 465-480
  53. Crystal structure of snake venom acetylcholinesterase in complex with inhibitory antibody fragment Fab410 bound at the peripheral site: evidence for open and closed states of a back door channel. (2015)
    Bourne Y, Renault L, Marchot P
    J Biol Chem 290 1522-1535
  54. The Megavirus chilensis Cu,Zn-superoxide dismutase: the first viral structure of a typical CCS-independent hyperstable dimeric enzyme. (2015)
    Lartigue A, Burlat B, Coutard B, Chaspoul F, Claverie JM, Abergel C
    J Virol 89 824-832
  55. NMR study of non-structural proteins-part II: H, C, N backbone and side-chain resonance assignment of macro domain from Venezuelan equine encephalitis virus (VEEV). (2015)
    Makrynitsa GI, Ntonti D, Marousis KD, Tsika AC, Lichiere J, Papageorgiou N, Coutard B, Bentrop D, Spyroulias GA
    Biomol NMR Assign 9 247-51
  56. NMR study of non-structural proteins-part I: H, C, N backbone and side-chain resonance assignment of macro domain from Mayaro virus (MAYV). (2015)
    Melekis E, Tsika AC, Lichiere J, Chasapis CT, Margiolaki I, Papageorgiou N, Coutard B, Bentrop D, Spyroulias GA
    Biomol NMR Assign 9 191-5
  57. Automatic Prediction of Polysaccharide Utilization Loci in Bacteroidetes Species. (2015)
    Terrapon N, Lombard V, Gilbert HJ, Henrissat B
    Bioinformatics 31 647-655
  58. A Glycogene Mutation Map (GlyMAP) for Discovery of Diseases of Glycosylation. (2015)
    Hansen L, Lind-Thomsen A, Joshi HJ, Pedersen NB, Have CT, Kong Y, Wang S, Sparso T, Grarup N, Vester-Christensen MB, Schjoldager K, Freeze HH, Hansen T, Pedersen O, Henrissat B, Mandel U, Clausen H, Wandall HH, Bennett EP
    Glycobiology 25 211-224
  59. The methyltransferase domain of dengue virus protein NS5 ensures efficient RNA synthesis initiation and elongation by the polymerase domain. (2015)
    Potisopon S, Priet S, Collet A, Decroly E, Canard B, Selisko B
    Nucleic Acids Res 42 11642-11656

2014

  1. Generation of a vector suite for protein solubility screening. (2014)
    Correa A, Ortega C, Obal G, Alzari P, Vincentelli R, Oppezzo P
    Front Microbiol 5 67
  2. High-throughput expression screening and purification of recombinant proteins in E. coli. (2014)
    Saez NJ, Vincentelli R
    Methods Mol Biol 1091 33-53
  3. Uronic polysaccharide degrading enzymes. (2014)
    Garron ML, Cygler M
    Curr Opin Struct Biol 28 87-95
  4. Bile-mediated activation of the acrAB and tolC multidrug efflux genes occurs mainly through transcriptional derepression of ramA in Salmonella enterica serovar Typhimurium. (2014)
    Baucheron S, Nishino K, Monchaux I, Canepa S, Maurel MC, Coste F, Roussel A, Cloeckaert A, Giraud E
    J Antimicrob Chemother 69 2400-6
  5. New selective peptidyl di(chlorophenyl) phosphonate esters for visualizing and blocking neutrophil proteinase 3 in human diseases. (2014)
    Guarino C, Legowska M, Epinette C, Kellenberger C, Dallet-Choisy S, Sienczyk M, Gabant G, Cadene M, Zoidakis J, Vlahou A, Wysocka M, Marchand-Adam S, Jenne DE, Lesner A, Gauthier F, Korkmaz B
    J Biol Chem 289 31777-91
  6. A Cutinase from Trichoderma reesei with a lid-covered active site and kinetic properties of true lipases. (2014)
    Roussel A, Amara S, Nyyssola A, Mateos-Diaz E, Blangy S, Kontkanen H, Westerholm-Parvinen A, Carriere F, Cambillau C
    J Mol Biol 426 3757-72
  7. Functional Annotation of the Ophiostoma novo-ulmi Genome: Insights into the Phytopathogenicity of the Fungal Agent of Dutch Elm Disease. (2014)
    Comeau AM, Dufour J, Bouvet GF, Jacobi V, Nigg M, Henrissat B, Laroche J, Levesque RC, Bernier L
    Genome Biol Evol 7 410-430
  8. Scribble1/AP2 Complex Coordinates NMDA Receptor Endocytic Recycling. (2014)
    Piguel NH, Fievre S, Blanc JM, Carta M, Moreau MM, Moutin E, Pinheiro VL, Medina C, Ezan J, Lasvaux L, Loll F, Durand CM, Chang K, Petralia RS, Wenthold RJ, Stephenson FA, Vuillard L, Darbon H, Perroy J, Mulle C, Montcouquiol M, Racca C, Sans N.
    Cell Rep 9 712-27
  9. Draft Genome Sequence of Pseudoalteromonas sp. Strain PLSV, an Ulvan-Degrading Bacterium. (2014)
    Kopel M, Helbert W, Henrissat B, Doniger T, Banin E
    Genome Announc 2 e01257-14
  10. High throughput quantitative expression screening and purification applied to recombinant disulfide-rich venom proteins produced in E. coli. (2014)
    Saez NJ, Nozach H, Blemont M, Vincentelli R
    J Vis Exp 89 e51464
  11. X-ray structure of the mouse serotonin 5-HT3 receptor. (2014)
    Hassaine G, Deluz C, Grasso L, Wyss R, Tol MB, Hovius R, Graff A, Stahlberg H, Tomizaki T, Desmyter A, Moreau C, Li XD, Poitevin F, Vogel H, Nury H
    Nature 512 276-81
  12. Analysis of the Phlebiopsis gigantea genome, transcriptome and secretome provides insight into its pioneer colonization strategies of wood. (2014)
    Hori C, Ishida T, Igarashi K, Samejima M, Suzuki H, Master E, Ferreira P, Ruiz-Duenas FJ, Held B, Canessa P, Larrondo LF, Schmoll M, Druzhinina IS, Kubicek CP, Gaskell JA, Kersten P, St John F, Glasner J, Sabat G, Splinter BonDurant S, Syed K, Yadav J, Mgbeahuruike AC, Kovalchuk A, Asiegbu FO, Lackner G, Hoffmeister D, Rencoret J, Gutierrez A, Sun H, Lindquist E, Barry K, Riley R, Grigoriev IV, Henrissat B, Kues U, Berka RM, Martinez AT, Covert SF, Blanchette RA, Cullen D
    PLoS Genet 10 e1004759
  13. One severe acute respiratory syndrome coronavirus protein complex integrates processive RNA polymerase and exonuclease activities. (2014)
    Subissi L, Posthuma CC, Collet A, Zevenhoven-Dobbe JC, Gorbalenya AE, Decroly E, Snijder EJ, Canard B, Imbert I
    Proc Natl Acad Sci U S A 111 E3900-9
  14. Insights into RNA synthesis, capping, and proofreading mechanisms of SARS-coronavirus. (2014)
    Sevajol M, Subissi L, Decroly E, Canard B, Imbert I
    Virus Res 194 90-99
  15. Special Issue on "Freshwater and marine toxins" (2014)
    Benoit E, Mattei C, Barbier J, Marchot P, Molgo J, Servent D
    Toxicon 91 1-4
  16. Gill bacteria enable a novel digestive strategy in a wood-feeding mollusk. (2014)
    O'Connor RM, Fung JM, Sharp KH, Benner JS, McClung C, Cushing S, Lamkin ER, Fomenkov AI, Henrissat B, Londer YY, Scholz MB, Posfai J, Malfatti S, Tringe SG, Woyke T, Malmstrom RR, Coleman-Derr D, Altamia MA, Dedrick S, Kaluziak ST, Haygood MG, Distel DL
    Proc Natl Acad Sci U S A 111 E5096-104
  17. Comparative genomics of the major fungal agents of human and animal Sporotrichosis: Sporothrix schenckii and Sporothrix brasiliensis . (2014)
    Teixeira MM, de Almeida LG, Kubitschek-Barreira P, Alves FL, Kioshima ES, Abadio AK, Fernandes L, Derengowski LS, Ferreira KS, Souza RC, Ruiz JC, de Andrade NC, Paes HC, Nicola AM, Albuquerque P, Gerber AL, Martins VP, Peconick LD, Neto AV, Chaucanez CB, Silva PA, Cunha OL, de Oliveira FF, Dos Santos TC, Barros AL, Soares MA, de Oliveira LM, Marini MM, Villalobos-Duno H, Cunha MM, de Hoog S, da Silveira JF, Henrissat B, Nino-Vega GA, Cisalpino PS, Mora-Montes HM, Almeida SR, Stajich JE, Lopes-Bezerra LM, Vasconcelos AT, Felipe MS
    BMC Genomics 15 943
  18. Functional characterization of a vacuolar invertase from Solanum lycopersicum: post-translational regulation by N-glycosylation and a proteinaceous inhibitor. (2014)
    Tauzin AS, Sulzenbacher G, Lafond M, Desseaux V, Reca IB, Perrier J, Bellincampi D, Fourquet P, Leveque C, Giardina T
    Biochimie 101 39-49
  19. Draft Genome Sequence of Nonlabens ulvanivorans , an Ulvan-Degrading Bacterium. (2014)
    Kopel M, Helbert W, Henrissat B, Doniger T, Banin E
    Genome Announc 2 e00793-14
  20. Draft Genome Sequences of Two Ulvan-Degrading Isolates, Strains LTR and LOR, That Belong to the Alteromonas Genus. (2014)
    Kopel M, Helbert W, Henrissat B, Doniger T, Banin E
    Genome Announc 2 e01081-14
  21. Fast solubilization of recalcitrant cellulosic biomass by the basidiomycete fungus Laetisaria arvalis involves successive secretion of oxidative and hydrolytic enzymes. (2014)
    Navarro D, Rosso MN, Haon M, Olive C, Bonnin E, Lesage-Meessen L, Chevret D, Coutinho PM, Henrissat B, Berrin JG
    Biotechnol Biofuels 7 143
  22. Dissection of hexosyl-and sialyl-transferase domains in the bi-functional capsule polymerases from Neisseria meningitidis W and Y defines a new sialyltransferase family. (2014)
    Romanow A, Keys TG, Stummeyer K, Freiberger F, Henrissat B, Gerardy-Schahn R
    J Biol Chem 289 33945-33957
  23. Bacteria from diverse habitats colonize and compete in the mouse gut. (2014)
    Seedorf H, Griffin NW, Ridaura VK, Reyes A, Cheng J, Rey FE, Smith MI, Simon GM, Scheffrahn RH, Woebken D, Spormann AM, Van Treuren W, Ursell LK, Pirrung M, Robbins-Pianka A, Cantarel BL, Lombard V, Henrissat B, Knight R, Gordon JI
    Cell 159 253-266
  24. Structural and functional characterization of the Clostridium perfringens N-acetylmannosamine-6-phosphate 2-epimerase essential for the sialic acid salvage pathway. (2014)
    Pelissier MC, Sebban-Kreuzer C, Guerlesquin F, Brannigan JA, Bourne Y, Vincent F
    J Biol Chem 289 35215-35224
  25. Carbohydrate-related enzymes of important Phytophthora plant pathogens. (2014)
    Brouwer H, Coutinho PM, Henrissat B, de Vries RP
    Fungal Genet Biol 72 192-200
  26. Genomic and transcriptomic analysis of Laccaria bicolor CAZome reveals insights into polysaccharides remodelling during symbiosis establishment. (2014)
    Veneault-Fourrey C, Commun C, Kohler A, Morin E, Balestrini R, Plett J, Danchin E, Coutinho P, Wiebenga A, de Vries RP, Henrissat B, Martin F
    Fungal Genet Biol 72 168-181
  27. Comparative analysis of carbohydrate active enzymes in Clostridium termitidis CT1112 reveals complex carbohydrate degradation ability. (2014)
    Munir RI, Schellenberg J, Henrissat B, Verbeke TJ, Sparling R, Levin DB
    PLoS One 9 e104260
  28. Le microbiote intestinal et la digestion des polysaccharides (2014)
    El Kaoutari A, Armougom F, Raoult D, Henrissat B
    Med Sci (Paris) 30 259-265
  29. Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951. (2014)
    Toome M, Kuo A, Henrissat B, Lipzen A, Tritt A, Yoshinaga Y, Zane M, Barry K, Grigoriev IV, Spatafora JW, Aime MC
    Genome Announc 2 e00539-14
  30. Rumen cellulosomics: divergent fiber-degrading strategies revealed by comparative genome-wide analysis of six ruminococcal strains. (2014)
    Dassa B, Borovok I, Ruimy-Israeli V, Lamed R, Flint HJ, Duncan SH, Henrissat B, Coutinho P, Morrison M, Mosoni P, Yeoman CJ, White BA, Bayer EA
    PLoS One 9 e99221
  31. Enhanced whole genome sequence and annotation of Clostridium stercorarium DSM8532T using RNA-seq transcriptomics and high-throughput proteomics. (2014)
    Schellenberg JJ, Verbeke TJ, McQueen P, Krokhin OV, Zhang X, Alvare G, Fristensky B, Thallinger GG, Henrissat B, Wilkins JA, Levin DB, Sparling R
    BMC Genomics 15 567
  32. Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi. (2014)
    Riley R, Salamov AA, Brown DW, Nagy LG, Floudas D, Held BW, Levasseur A, Lombard V, Morin E, Otillar R, Lindquist EA, Sun H, LaButti KM, Schmutz J, Jabbour D, Luo H, Baker SE, Pisabarro AG, Walton JD, Blanchette RA, Henrissat B, Martin F, Cullen D, Hibbett DS, Grigoriev IV
    Proc Natl Acad Sci U S A 111 9923-9928
  33. The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown. (2014)
    Levasseur A, Lomascolo A, Chabrol O, Ruiz-Duenas FJ, Boukhris-Uzan E, Piumi F, Kues U, Ram AF, Murat C, Haon M, Benoit I, Arfi Y, Chevret D, Drula E, Kwon MJ, Gouret P, Lesage-Meessen L, Lombard V, Mariette J, Noirot C, Park J, Patyshakuliyeva A, Sigoillot JC, Wiebenga A, Wosten HA, Martin F, Coutinho PM, de Vries RP, Martinez AT, Klopp C, Pontarotti P, Henrissat B, Record E
    BMC Genomics 15 486
  34. Coiled-coil deformations in crystal structures: the measles virus phosphoprotein multimerization domain as an illustrative example. (2014)
    Blocquel D, Habchi J, Durand E, Sevajol M, Ferron F, Erales J, Papageorgiou N, Longhi S
    Acta Crystallogr D Biol Crystallogr 70 1589-1603
  35. CryoEM structure of the lactococcal siphophage 1358 virion. (2014)
    Spinelli S, Bebeacua C, Orlov I, Tremblay D, Klaholz BP, Moineau S, Cambillau C
    J Virol 88 8900-8910
  36. Are stool samples suitable for studying the link between gut microbiota and obesity? (2014)
    Raoult D, Henrissat B
    Eur J Epidemiol 29 307-9
  37. Structural Disorder in Viral Proteins. (2014)
    Xue B, Blocquel D, Habchi J, Uversky AV, Kurgan L, Uversky VN, Longhi S
    Chem Rev 114 6880-6911
  38. Differences in lactococcal cell wall polysaccharide structure are major determining factors in bacteriophage sensitivity. (2014)
    Ainsworth S, Sadovskaya I, Vinogradov E, Courtin P, Guerardel Y, Mahony J, Grard T, Cambillau C, Chapot-Chartier MP, van Sinderen D
    MBio 5 e00880-14
  39. The Crystal Structure of a Cardiovirus RNA-Dependent RNA Polymerase Reveals an Unusual Conformation of the Polymerase Active Site. (2014)
    Vives-Adrian L, Lujan C, Oliva B, van der Linden L, Selisko B, Coutard B, Canard B, van Kuppeveld FJ, Ferrer-Orta C, Verdaguer N
    J Virol 88 5595-607
  40. How do gut microbes break down dietary fiber? (2014)
    Terrapon N, Henrissat B
    Trends Biochem Sci 39 156-8
  41. Architecture and assembly of the Type VI secretion system. (2014)
    Zoued A, Brunet YR, Durand E, Aschtgen MS, Logger L, Douzi B, Journet L, Cambillau C, Cascales E
    Biochim Biophys Acta 1843 1664-1673
  42. Comparative analyses of Podospora anserina secretomes reveal a large array of lignocellulose-active enzymes. (2014)
    Poidevin L, Berrin JG, Bennati-Granier C, Levasseur A, Herpoel-Gimbert I, Chevret D, Coutinho PM, Henrissat B, Heiss-Blanquet S, Record E
    Appl Microbiol Biotechnol 98 7457-7469
  43. Assessment of Dengue virus helicase and methyltransferase as targets for fragment-based drug discovery. (2014)
    Coutard B, Decroly E, Li C, Sharff A, Lescar J, Bricogne G, Barral K
    Antiviral Res 106C 61-70
  44. Molecular insights on the recognition of a Lactococcus lactis cell wall pellicle by phage 1358 receptor binding protein. (2014)
    Farenc C, Spinelli S, Vinogradov E, Tremblay D, Blangy S, Sadovskaya I, Moineau S, Cambillau C
    J Virol 88 7005-15
  45. Introducing Protein Intrinsic Disorder. (2014)
    Habchi J, Tompa P, Longhi S, Uversky VN
    Chem Rev 114 6561-6588
  46. Genome sequence and transcriptome analyses of the thermophilic zygomycete fungus Rhizomucor miehei. (2014)
    Zhou P, Zhang G, Chen S, Jiang Z, Tang Y, Henrissat B, Yan Q, Yang S, Chen CF, Zhang B, Du Z
    BMC Genomics 15 294
  47. Bacteria, phages and pigs: the effects of in-feed antibiotics on the microbiome at different gut locations. (2014)
    Looft T, Allen HK, Cantarel BL, Levine UY, Bayles DO, Alt DP, Henrissat B, Stanton TB
    ISME J 8 1566-1576
  48. Comparative genomics analysis of Lactobacillus species associated with weight gain or weight protection. (2014)
    Drissi F, Merhej V, Angelakis E, El Kaoutari A, Carriere F, Henrissat B, Raoult D
    Nutr Diabetes 4 e109
  49. Crystal Structure and Self-Interaction of the Type VI Secretion Tail-Tube Protein from Enteroaggregative Escherichia coli. (2014)
    Douzi B, Spinelli S, Blangy S, Roussel A, Durand E, Brunet YR, Cascales E, Cambillau C
    PLoS One 9 e86918
  50. The Neuroligins and Their Ligands: from Structure to Function at the Synapse. (2014)
    Bourne Y, Marchot P
    J Mol Neurosci 53 387-96
  51. Diversification of EPR signatures in site directed spin labeling using a beta-phosphorylated nitroxide. (2014)
    Breton NL, Martinho M, Kabytaev K, Topin J, Mileo E, Blocquel D, Habchi J, Longhi S, Rockenbauer A, Golebiowski J, Guigliarelli B, Marque SR, Belle V
    Phys Chem Chem Phys 16 4202-9
  52. Structures and host-adhesion mechanisms of lactococcal siphophages. (2014)
    Spinelli S, Veesler D, Bebeacua C, Cambillau C
    Front Microbiol 5 3
  53. A novel unsaturated beta-glucuronyl hydrolase involved in ulvan degradation unveils the versatility of stereochemistry requirements in family GH105. (2014)
    Nyvall-Collen P, Jeudy A, Sassi JF, Groisillier A, Czjzek M, Coutinho PM, Helbert W
    J Biol Chem 289 6199-211
  54. First structural insights into alpha-L-arabinofuranosidases from the two GH62 glycoside hydrolase subfamilies. (2014)
    Siguier B, Haon M, Nahoum V, Marcellin M, Burlet-Schiltz O, Coutinho PM, Henrissat B, Mourey L, O Donohue MJ, Berrin JG, Tranier S, Dumon C
    J Biol Chem 289 5261-73
  55. Tracking the Origin and Divergence of Cholinesterases and Neuroligins: The Evolution of Synaptic Proteins. (2014)
    Lenfant N, Hotelier T, Bourne Y, Marchot P, Chatonnet A
    J Mol Neurosci 53 362-9
  56. Discovery and characterization of a new family of lytic polysaccharide monooxygenases. (2014)
    Hemsworth GR, Henrissat B, Davies GJ, Walton PH
    Nat Chem Biol 10 122-6
  57. Genome sequencing provides insight into the reproductive biology, nutritional mode and ploidy of the fern pathogen Mixia osmundae. (2014)
    Toome M, Ohm RA, Riley RW, James TY, Lazarus KL, Henrissat B, Albu S, Boyd A, Chow J, Clum A, Heller G, Lipzen A, Nolan M, Sandor L, Zvenigorodsky N, Grigoriev IV, Spatafora JW, Aime MC
    New Phytol 202 554-64
  58. Gene-targeted metagenomic analysis of glucan-branching enzyme gene profiles among human and animal fecal microbiota. (2014)
    Lee S, Cantarel B, Henrissat B, Gevers D, Birren BW, Huttenhower C, Ko G
    ISME J 8 493-503
  59. The carbohydrate-active enzymes database (CAZy) in 2013. (2014)
    Lombard V, Golaconda Ramulu H, Drula E, Coutinho PM, Henrissat B
    Nucleic Acids Res 42 D490-5
  60. SARS-CoV ORF1b-encoded nonstructural proteins 12-16: replicative enzymes as antiviral targets. (2014)
    Subissi L, Imbert I, Ferron F, Collet A, Coutard B, Decroly E, Canard B
    Antiviral Res 101 122-30
  61. Complete genome of a new Firmicutes species belonging to the dominant human colonic microbiota ('Ruminococcus bicirculans') reveals two chromosomes and a selective capacity to utilize plant glucans. (2014)
    Wegmann U, Louis P, Goesmann A, Henrissat B, Duncan SH, Flint HJ
    Environ Microbiol 16 2879-2890
  62. Comparative genomic analysis provides insights into the evolution and niche adaptation of marine Magnetospira sp. QH-2 strain. (2014)
    Ji B, Zhang SD, Arnoux P, Rouy Z, Alberto F, Philippe N, Murat D, Zhang WJ, Rioux JB, Ginet N, Sabaty M, Mangenot S, Pradel N, Tian J, Yang J, Zhang L, Zhang W, Pan H, Henrissat B, Coutinho PM, Li Y, Xiao T, Medigue C, Barbe V, Pignol D, Talla E, Wu LF
    Environ Microbiol 16 525-44

2013

  1. Development of an ELISA detecting Tumor Protein 53-Induced Nuclear Protein 1 in serum of prostate cancer patients. (2013)
    Saadi H, Seillier M, Sandi MJ, Peuget S, Kellenberger C, Gravis G, Dusetti NJ, Iovanna JL, Rocchi P, Amri M, Carrier A
    Results Immunol 3 51-6
  2. Expression in Escherichia coli: becoming faster and more complex. (2013)
    Vincentelli R, Romier C
    Curr Opin Struct Biol 23 326-34
  3. DNA-binding specificities of human transcription factors. (2013)
    Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J
    Cell 152 327-39
  4. High throughput screening identifies disulfide isomerase DsbC as a very efficient partner for recombinant expression of small disulfide-rich proteins in E. coli. (2013)
    Nozach H, Fruchart-Gaillard C, Fenaille F, Beau F, Ramos OH, Douzi B, Saez NJ, Moutiez M, Servent D, Gondry M, Thai R, Cuniasse P, Vincentelli R, Dive V
    Microb Cell Fact 12 37
  5. Development and Validation of a Microarray for the Investigation of the CAZymes Encoded by the Human Gut Microbiome. (2013)
    El Kaoutari A, Armougom F, Leroy Q, Vialettes B, Million M, Raoult D, Henrissat B
    PLoS One 8 e84033
  6. A Toxin-Antitoxin Module of Promotes Virulence in Mice. (2013)
    De la Cruz MA, Zhao W, Farenc C, Gimenez G, Raoult D, Cambillau C, Gorvel JP, Meresse S
    PLoS Pathog 9 e1003827
  7. Improving the soluble expression of recombinant proteins by randomly shuffling 5' and 3' coding-sequence ends. (2013)
    Bignon C, Li C, Lichiere J, Canard B, Coutard B
    Acta Crystallogr D Biol Crystallogr 69 2580-2
  8. Molecular Engineering of Fungal GH5 and GH26 Beta-(1,4)-Mannanases toward Improvement of Enzyme Activity. (2013)
    Couturier M, Feliu J, Bozonnet S, Roussel A, Berrin JG
    PLoS One 8 e79800
  9. Dissection of the TssB-TssC Interface during Type VI Secretion Sheath Complex Formation. (2013)
    Zhang XY, Brunet YR, Logger L, Douzi B, Cambillau C, Journet L, Cascales E
    PLoS One 8 e81074
  10. Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis. (2013)
    Tisserant E, Malbreil M, Kuo A, Kohler A, Symeonidi A, Balestrini R, Charron P, Duensing N, Frei Dit Frey N, Gianinazzi-Pearson V, Gilbert LB, Handa Y, Herr JR, Hijri M, Koul R, Kawaguchi M, Krajinski F, Lammers PJ, Masclaux FG, Murat C, Morin E, Ndikumana S, Pagni M, Petitpierre D, Requena N, Rosikiewicz P, Riley R, Saito K, San Clemente H, Shapiro H, van Tuinen D, Becard G, Bonfante P, Paszkowski U, Shachar-Hill YY, Tuskan GA, Young PW, Sanders IR, Henrissat B, Rensing SA, Grigoriev IV, Corradi N, Roux C, Martin F
    Proc Natl Acad Sci U S A 110 20117-22
  11. The abundance and variety of carbohydrate-active enzymes in the human gut microbiota. (2013)
    El Kaoutari A, Armougom F, Gordon JI, Raoult D, Henrissat B
    Nat Rev Microbiol 11 497-504
  12. Role of glycoside-phosphorylases in mannose foraging by human gut bacteria. (2013)
    Ladeveze S, Tarquis L, Cecchini DA, Bercovici J, Andre I, Topham CM, Morel S, Laville E, Monsan PF, Lombard V, Henrissat B, Potocki-Veronese G
    J Biol Chem 288 32370-32383
  13. Utilisation of Mucin Glycans by the Human Gut Symbiont Ruminococcus gnavus Is Strain-Dependent. (2013)
    Crost EH, Tailford LE, Le Gall G, Fons M, Henrissat B, Juge N
    PLoS One 8 e76341
  14. Cracking the code, slowly: the state of carbohydrate-active enzymes in 2013. (2013)
    Davies GJ, Henrissat B
    Curr Opin Struct Biol 23 649-651
  15. Identification of the galactosyltransferase of Cryptococcus neoformans involved in the biosynthesis of basidiomycete-type glycosylinositolphosphoceramide. (2013)
    Wohlschlager T, Buser R, Skowyra ML, Haynes BC, Henrissat B, Doering TL, Kunzler M, Aebi M
    Glycobiology 23 1210-9
  16. Molecular Characterization of Monoclonal Antibodies that Inhibit Acetylcholinesterase by Targeting the Peripheral Site and Backdoor Region. (2013)
    Bourne Y, Renault L, Essono S, Mondielli G, Lamourette P, Boquet D, Grassi J, Marchot P
    PLoS One 8 e77226
  17. Multiple rewards from a treasure trove of novel glycoside hydrolase and polysaccharide lyase structures: new folds, mechanistic details, and evolutionary relationships. (2013)
    Fushinobu S, Alves VD, Coutinho PM
    Curr Opin Struct Biol 23 652-9
  18. Structure-Activity Relationship Study of Biflavonoids on the Dengue Virus Polymerase DENV-NS5 RdRp. (2013)
    Coulerie P, Nour M, Maciuk A, Eydoux C, Guillemot JC, Lebouvier N, Hnawia E, Leblanc K, Lewin G, Canard B, Figadere B
    Planta Med 79 1313-8
  19. Special issue on "Toxins: From threats to benefits" (2013)
    Martin-Eauclaire MF, Benoit E, Marchot P, Barbier J, Molgo J, Servent D
    Toxicon 75 1-22
  20. Structure, Adsorption to Host, and Infection Mechanism of Virulent Lactococcal Phage p2. (2013)
    Bebeacua C, Tremblay D, Farenc C, Chapot-Chartier MP, Sadovskaya I, van Heel M, Veesler D, Moineau S, Cambillau C
    J Virol 87 (22) 12302-12
  21. Multiscaled exploration of coupled folding and binding of an intrinsically disordered molecular recognition element in measles virus nucleoprotein. (2013)
    Wang Y, Chu X, Longhi S, Roche P, Han W, Wang E, Wang J
    Proc Natl Acad Sci U S A 110 (40) E3743-52
  22. The identification and molecular characterization of the first archaeal bifunctional exo-beta-glucosidase/N-acetyl-beta-glucosaminidase demonstrates that family GH116 is made of three functionally distinct subfamilies. (2013)
    Ferrara MC, Cobucci-Ponzano B, Carpentieri A, Henrissat B, Rossi M, Amoresano A, Moracci M
    Biochim Biophys Acta 840 (1) 367-377
  23. Atomic Resolution Description of the Interaction between the Nucleoprotein and Phosphoprotein of Hendra Virus. (2013)
    Communie G, Habchi J, Yabukarski F, Blocquel D, Schneider R, Tarbouriech N, Papageorgiou N, Ruigrok RW, Jamin M, Jensen MR, Longhi S, Blackledge M
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    Blocquel D, Beltrandi M, Erales J, Barbier P, Longhi S
    Virology 446 162-72
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    Accardo A, Leone M, Tesauro D, Aufiero R, Benarouche A, Cavalier JF, Longhi S, Carriere F, Rossi F
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    Flot JF, Hespeels B, Li X, Noel B, Arkhipova I, Danchin EG, Hejnol A, Henrissat B, Koszul R, Aury JM, Barbe V, Barthelemy RM, Bast J, Bazykin GA, Chabrol O, Couloux A, Da Rocha M, Da Silva C, Gladyshev E, Gouret P, Hallatschek O, Hecox-Lea B, Labadie K, Lejeune B, Piskurek O, Poulain J, Rodriguez F, Ryan JF, Vakhrusheva OA, Wajnberg E, Wirth B, Yushenova I, Kellis M, Kondrashov AS, Mark Welch DB, Pontarotti P, Weissenbach J, Wincker P, Jaillon O, Van Doninck K
    Nature 500 453-7
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    Patyshakuliyeva A, Jurak E, Kohler A, Baker A, Battaglia E, de Bruijn W, Burton KS, Challen MP, Coutinho PM, Eastwood DC, Gruben BS, Makela MR, Martin F, Nadal M, van den Brink J, Wiebenga A, Zhou M, Henrissat B, Kabel M, Gruppen H, de Vries RP
    BMC Genomics 14 663
  28. Functional metagenomics reveals novel pathways of prebiotic breakdown by human gut bacteria. (2013)
    Cecchini DA, Laville E, Laguerre S, Robe P, Leclerc M, Dore J, Henrissat B, Remaud-Simeon M, Monsan P, Potocki-Veronese G
    PLoS One 8 e72766
  29. TssK is a trimeric cytoplasmic protein interacting with components of both phage-like and membrane anchoring complexes of the Type VI secretion system. (2013)
    Zoued A, Durand E, Bebeacua C, Brunet YR, Douzi B, Cambillau C, Cascales E, Journet L
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  30. Gut microbiota from twins discordant for obesity modulate metabolism in mice. (2013)
    Ridaura VK, Faith JJ, Rey FE, Cheng J, Duncan AE, Kau AL, Griffin NW, Lombard V, Henrissat B, Bain JR, Muehlbauer MJ, Ilkayeva O, Semenkovich CF, Funai K, Hayashi DK, Lyle BJ, Martini MC, Ursell LK, Clemente JC, Van Treuren W, Walters WA, Knight R, Newgard CB, Heath AC, Gordon JI
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    Bastien G, Arnal G, Bozonnet S, Laguerre S, Ferreira F, Faure R, Henrissat B, Lefevre F, Robe P, Bouchez O, Noirot C, Dumon C, O Donohue M
    Biotechnol Biofuels 6 78
  32. Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome. (2013)
    McNulty NP, Wu M, Erickson AR, Pan C, Erickson BK, Martens EC, Pudlo NA, Muegge BD, Henrissat B, Hettich RL, Gordon JI
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    Gruet A, Dosnon M, Vassena A, Lombard V, Gerlier D, Bignon C, Longhi S
    J Mol Biol 425 3495-509
  34. Genomewide analysis of polysaccharides degrading enzymes in 11 white- and brown-rot Polyporales provides insight into mechanisms of wood decay. (2013)
    Hori C, Gaskell J, Igarashi K, Samejima M, Hibbett DS, Henrissat B, Cullen D
    Mycologia 105(16) 1412-27
  35. Crystallization and preliminary X-ray analysis of monalysin, a novel beta-pore-forming toxin from the entomopathogen Pseudomonas entomophila. (2013)
    Blemont M, Vincentelli R, Kellenberger C, Opota O, Lemaitre B, Roussel A, Leone P
    Acta Crystallogr Sect F Struct Biol Cryst Commun 69 930-933
  36. Development of specific dengue virus 2'-O- and N7-methyltransferase assays for antiviral drug screening. (2013)
    Barral K, Sallamand C, Petzold C, Coutard B, Collet A, Thillier Y, Zimmermann J, Vasseur JJ, Canard B, Rohayem J, Debart F, Decroly E
    Antiviral Res 99 292-300
  37. SAMHD1 restricts the replication of human immunodeficiency virus type 1 by depleting the intracellular pool of deoxynucleoside triphosphates. (2013)
    Lahouassa H, Daddacha W, Hofmann H, Ayinde D, Logue EC, Dragin L, Bloch N, Maudet C, Bertrand M, Gramberg T, Pancino G, Priet S, Canard B, Laguette N, Benkirane M, Transy C, Landau NR, Kim B, Margottin-Goguet F
    Nat Immunol 14 877
  38. Neutrophil proteinase 3 and dipeptidyl peptidase I (cathepsin C) as pharmacological targets in granulomatosis with polyangiitis (Wegener granulomatosis). (2013)
    Korkmaz B, Lesner A, Letast S, Mahdi YK, Jourdan ML, Dallet-Choisy S, Marchand-Adam S, Kellenberger C, Viaud-Massuard MC, Jenne DE, Gauthier F
    Semin Immunopathol 35 411-21
  39. The first structure of a mycobacteriophage, Araucaria. (2013)
    Sassi M, Bebeacua C, Drancourt M, Cambillau C
    J Virol 87 8099-109
  40. Structure and Functional analysis of the host-recognition device of Lactococcal Phage Tuc2009. (2013)
    Collins B, Bebeacua C, Mahony J, Blangy S, Douillard FP, Veesler D, Cambillau C, van Sinderen D
    J Virol 87 8429-40
  41. The DNA binding mechanism of a SSB protein from Lactococcus lactis siphophage p2. (2013)
    Scaltriti E, Polverini E, Grolli S, Eufemi E, Moineau S, Cambillau C, Ramoni R
    Biochim Biophys Acta 1834 1070-76
  42. Exploring family 6 glycoside hydrolases from Podospora anserina : insights into exo- and endo-glucanase activities. (2013)
    Poidevin L, Feliu J, Doan A, Berrin JG, Bey M, Coutinho PM, Henrissat B, Record E, Heiss-Blanquet S
    Appl Environ Microbiol 79 4220-9
  43. X-ray structure of a superinfection exclusion lipoprotein from phage TP-J34 and identification of the tape measure protein as its target. (2013)
    Bebeacua C, Lorenzo Fajardo JC, Blangy S, Spinelli S, Bollmann S, Neve H, Cambillau C, Heller KJ
    Mol Microbiol 89 152-65
  44. Genome of the red alga Porphyridium purpureum. (2013)
    Bhattacharya D, Price DC, Xin Chan C, Qiu H, Rose N, Ball S, Weber AP, Cecilia Arias M, Henrissat B, Coutinho PM, Krishnan A, Zauner S, Morath S, Hilliou F, Egizi A, Perrineau MM, Yoon HS
    Nat Commun 4 1941
  45. Structural and biochemical analyses of glycoside hydrolase families 5 and 26 beta-(1,4)-mannanases from Podospora anserina reveal differences upon manno-oligosaccharides catalysis. (2013)
    Couturier M, Roussel A, Rosengren A, Leone P, Stalbrand H, Berrin JG
    J Biol Chem 288 14624-35
  46. Ester prodrugs of acyclic nucleoside thiophosphonates compared to phosphonates: Synthesis, antiviral activity and decomposition study. (2013)
    Roux L, Priet S, Payrot N, Weck C, Fournier M, Zoulim F, Balzarini J, Canard B, Alvarez K
    Eur J Med Chem 63C 869-881
  47. 3',5'Di-O-trityluridine inhibits in vitro flavivirus replication. (2013)
    De Burghgraeve T, Selisko B, Kaptein S, Chatelain G, Leyssen P, Debing Y, Jacobs M, Van Aerschot A, Canard B, Neyts J
    Antiviral Res 98 242-7
  48. Characterization of salt-adapted secreted lignocellulolytic enzymes from the mangrove fungus Pestalotiopsis sp. (2013)
    Arfi Y, Chevret D, Henrissat B, Berrin JG, Levasseur A, Record E
    Nat Commun 4 1810
  49. Selective inhibitors of human neutrophil proteinase 3. (2013)
    Korkmaz B, Kellenberger C, Viaud-Massuard MC, Gauthier F
    Curr Pharm Des 19 966-76
  50. Genomic Evaluation of Thermoanaerobacter spp. for the Construction of Designer Co-Cultures to Improve Lignocellulosic Biofuel Production. (2013)
    Verbeke TJ, Zhang X, Henrissat B, Spicer V, Rydzak T, Krokhin OV, Fristensky B, Levin DB, Sparling R
    PLoS One 8 e59362
  51. Viral infection modulation and neutralization by camelid nanobodies. (2013)
    Desmyter A, Farenc C, Mahony J, Spinelli S, Bebeacua C, Blangy S, Veesler D, van Sinderen D, Cambillau C
    Proc Natl Acad Sci U S A 110 E1371-9
  52. Nuclear localization of dengue virus nonstructural protein 5 does not strictly correlate with efficient viral RNA replication and inhibition of type I interferon signaling. (2013)
    Kumar A, Buhler S, Selisko B, Davidson A, Mulder K, Canard B, Miller S, Bartenschlager R
    J Virol 87 4545-57
  53. Selective Serotonin Reuptake Inhibitor Fluoxetine Inhibits Replication of Human Enteroviruses B and D by Targeting Viral Protein 2C. (2013)
    Ulferts R, van der Linden L, Thibaut HJ, Lanke KH, Leyssen P, Coutard B, De Palma AM, Canard B, Neyts J, van Kuppeveld FJ
    Antimicrob Agents Chemother 57 1952-6
  54. The structure of a Streptomyces avermitilis alpha-L-rhamnosidase reveals a novel carbohydrate-binding module CBM67 within the six-domain arrangement. (2013)
    Fujimoto Z, Jackson A, Michikawa M, Maehara T, Momma M, Henrissat B, Gilbert HJ, Kaneko S
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  55. Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes. (2013)
    Levasseur A, Drula E, Lombard V, Coutinho PM, Henrissat B
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  56. Comparative Genomics of a Plant-Pathogenic Fungus, Pyrenophora tritici-repentis , Reveals Transduplication and the Impact of Repeat Elements on Pathogenicity and Population Divergence. (2013)
    Manning VA, Pandelova I, Dhillon B, Wilhelm LJ, Goodwin SB, Berlin AM, Figueroa M, Freitag M, Hane JK, Henrissat B, Holman WH, Kodira CD, Martin J, Oliver RP, Robbertse B, Schackwitz W, Schwartz DC, Spatafora JW, Turgeon BG, Yandava C, Young S, Zhou S, Zeng Q, Grigoriev IV, Ma LJ, Ciuffetti LM
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    Samson JE, Spinelli S, Cambillau C, Moineau S
    Mol Microbiol 87 756-68
  58. Cello-Oligosaccharide Oxidation Reveals Differences between Two Lytic Polysaccharide Monooxygenases (Family GH61) from Podospora anserina (2013)
    Bey M, Zhou S, Poidevin L, Henrissat B, Coutinho PM, Berrin JG, Sigoillot JC
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    Martinho M, Habchi J, El Habre Z, Nesme L, Guigliarelli B, Belle V, Longhi S
    J Biomol Struct Dyn 31 453-71
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    Peixeiro N, Keller J, Collinet B, Leulliot N, Campanacci V, Cortez D, Cambillau C, Nitta KR, Vincentelli R, Forterre P, Prangishvili D, Sezonov G, van Tilbeurgh H
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    Bebeacua C, Lai L, Vegge CS, Brondsted L, van Heel M, Veesler D, Cambillau C
    J Virol 87 1061-8
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    Lenfant N, Hotelier T, Velluet E, Bourne Y, Marchot P, Chatonnet A
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2012

  1. Tissue- and ligand-specific sensing of gram-negative infection in drosophila by PGRP-LC isoforms and PGRP-LE. (2012)
    Neyen C, Poidevin M, Roussel A, Lemaitre B
    J Immunol 189 1886-97
  2. Structure of human DNase I bound to magnesium and phosphate ions points to a catalytic mechanism common to members of the DNase I-like superfamily. (2012)
    Parsiegla G, Noguere C, Santell L, Lazarus RA, Bourne Y
    Biochemistry 51 10250-8
  3. How nature can exploit nonspecific catalytic and carbohydrate binding modules to create enzymatic specificity. (2012)
    Cuskin F, Flint JE, Gloster TM, Morland C, Basle A, Henrissat B, Coutinho PM, Strazzulli A, Solovyova AS, Davies GJ, Gilbert HJ
    Proc Natl Acad Sci U S A 109 20889-94
  4. Peptidoglycan: a post-genomic analysis. (2012)
    Cayrou C, Henrissat B, Gouret P, Pontarotti P, Drancourt M
    BMC Microbiol 12 294
  5. Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen dothideomycetes fungi. (2012)
    Ohm RA, Feau N, Henrissat B, Schoch CL, Horwitz BA, Barry KW, Condon BJ, Copeland AC, Dhillon B, Glaser F, Hesse CN, Kosti I, Labutti K, Lindquist EA, Lucas S, Salamov AA, Bradshaw RE, Ciuffetti L, Hamelin RC, Kema GH, Lawrence C, Scott JA, Spatafora JW, Turgeon BG, de Wit PJ, Zhong S, Goodwin SB, Grigoriev IV
    PLoS Pathog 8 e1003037
  6. Structural characterization and oligomerization of the TssL protein, a component shared by the bacterial Type VI and Type IVb secretion systems. (2012)
    Durand E, Zoued A, Spinelli S, Watson PJ, Aschtgen MS, Journet L, Cambillau C, Cascales E
    J Biol Chem 287 14157-68
  7. Biflavonoids of Dacrydium balansae with Potent Inhibitory Activity on Dengue 2 NS5 Polymerase. (2012)
    Coulerie P, Eydoux C, Hnawia E, Stuhl L, Maciuk A, Lebouvier N, Canard B, Figadere B, Guillemot JC, Nour M
    Planta Med 78 672-7
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    Bourjot M, Leyssen P, Eydoux C, Guillemot JC, Canard B, Rasoanaivo P, Gueritte F, Litaudon M
    Fitoterapia 83 1076-80
  9. RNA 3'-end mismatch excision by the severe acute respiratory syndrome coronavirus nonstructural protein nsp10 nsp14 exoribonuclease complex. (2012)
    Bouvet M, Imbert I, Subissi L, Gluais L, Canard B, Decroly E
    Proc Natl Acad Sci U S A 109 9372-7
  10. Exploring natural fungal biodiversity from tropical and temperate forests to improve biomass conversion. (2012)
    Berrin JG, Navarro D, Couturier M, Olive C, Grisel S, Haon M, Taussac S, Lechat C, Courtecuisse R, Favel A, Coutinho PM, Lesage-Meessen L
    Appl Environ Microbiol 78 6483-90
  11. Effects of Dietary Fiber on the Feline Gastrointestinal Metagenome. (2012)
    Barry KA, Middelbos IS, Vester Boler BM, Dowd SE, Suchodolski JS, Henrissat B, Coutinho PM, White BA, Fahey GC Jr, Swanson KS
    J Proteome Res 11 5924-5933
  12. Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs. (2012)
    Curtis BA, Tanifuji G, Burki F, Gruber A, Irimia M, Maruyama S, Arias MC, Ball SG, Gile GH, Hirakawa Y, Hopkins JF, Kuo A, Rensing SA, Schmutz J, Symeonidi A, Elias M, Eveleigh RJ, Herman EK, Klute MJ, Nakayama T, Obornik M, Reyes-Prieto A, Armbrust EV, Aves SJ, Beiko RG, Coutinho P, Dacks JB, Durnford DG, Fast NM, Green BR, Grisdale CJ, Hempel F, Henrissat B, Hoppner MP, Ishida KI, Kim E, Koreny L, Kroth PG, Liu Y, Malik SB, Maier UG, McRose D, Mock T, Neilson JA, Onodera NT, Poole AM, Pritham EJ, Richards TA, Rocap G, Roy SW, Sarai C, Schaack S, Shirato S, Slamovits CH, Spencer DF, Suzuki S, Worden AZ, Zauner S, Barry K, Bell C, Bharti AK, Crow JA, Grimwood J, Kramer R, Lindquist E, Lucas S, Salamov A, McFadden GI, Lane CE, Keeling PJ, Gray MW, Grigoriev IV, Archibald JM
    Nature 492 59-65
  13. Monitoring structural transitions in IDPs by site-directed spin labeling EPR spectroscopy. (2012)
    Habchi J, Martinho M, Gruet A, Guigliarelli B, Longhi S, Belle V
    Methods Mol Biol 895 361-86
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    Yang H, Habchi J, Longhi S, Londergan CH
    Methods Mol Biol 895 245-70
  15. Involvement of the major capsid protein and two early-expressed phage genes in the activity of the lactococcal abortive infection mechanism AbiT. (2012)
    Labrie SJ, Tremblay DM, Moisan M, Villion M, Magadan AH, Campanacci V, Cambillau C, Moineau S
    Appl Environ Microbiol 78 6890-9
  16. The viral RNA capping machinery as a target for antiviral drugs. (2012)
    Ferron F, Decroly E, Selisko B, Canard B
    Antiviral Res 96 21-31
  17. Interaction between the C-terminal domains of measles virus nucleoprotein and phosphoprotein: a tight complex implying one binding site. (2012)
    Blocquel D, Habchi J, Costanzo S, Doizy A, Oglesbee M, Longhi S
    Protein Sci 21 1577-85
  18. Antiviral chlorinated daphnane diterpenoid orthoesters from the bark and wood of Trigonostemon cherrieri. (2012)
    Allard PM, Leyssen P, Martin MT, Bourjot M, Dumontet V, Eydoux C, Guillemot JC, Canard B, Poullain C, Gueritte F, Litaudon M
    Phytochemistry 84 160-8
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    Selisko B, Potisopon S, Agred R, Priet S, Varlet I, Thillier Y, Sallamand C, Debart F, Vasseur JJ, Canard B
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  20. Crystal structure of greglin, a novel non-classical Kazal inhibitor, in complex with subtilisin. (2012)
    Derache C, Epinette C, Roussel A, Gabant G, Cadene M, Korkmaz B, Gauthier F, Kellenberger C
    FEBS J 279 4466-78
  21. The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry. (2012)
    de Wit PJ, van der Burgt A, Okmen B, Stergiopoulos I, Abd-Elsalam KA, Aerts AL, Bahkali AH, Beenen HG, Chettri P, Cox MP, Datema E, de Vries RP, Dhillon B, Ganley AR, Griffiths SA, Guo Y, Hamelin RC, Henrissat B, Kabir MS, Jashni MK, Kema G, Klaubauf S, Lapidus A, Levasseur A, Lindquist E, Mehrabi R, Ohm RA, Owen TJ, Salamov A, Schwelm A, Schijlen E, Sun H, van den Burg HA, van Ham RC, Zhang S, Goodwin SB, Grigoriev IV, Collemare J, Bradshaw RE
    PLoS Genet 8 e1003088
  22. Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease. (2012)
    Erickson AR, Cantarel BL, Lamendella R, Darzi Y, Mongodin EF, Pan C, Shah M, Halfvarson J, Tysk C, Henrissat B, Raes J, Verberkmoes NC, Fraser CM, Hettich RL, Jansson JK
    PLoS One 7 e49138
  23. Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche. (2012)
    Morin E, Kohler A, Baker AR, Foulongne-Oriol M, Lombard V, Nagy LG, Ohm RA, Patyshakuliyeva A, Brun A, Aerts AL, Bailey AM, Billette C, Coutinho PM, Deakin G, Doddapaneni H, Floudas D, Grimwood J, Hilden K, Kues U, Labutti KM, Lapidus A, Lindquist EA, Lucas SM, Murat C, Riley RW, Salamov AA, Schmutz J, Subramanian V, Wosten HA, Xu J, Eastwood DC, Foster GD, Sonnenberg AS, Cullen D, de Vries RP, Lundell T, Hibbett DS, Henrissat B, Burton KS, Kerrigan RW, Challen MP, Grigoriev IV, Martin F
    Proc Natl Acad Sci U S A 109 17501-17506
  24. Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism. (2012)
    Veesler D, Spinelli S, Mahony J, Lichiere J, Blangy S, Bricogne G, Legrand P, Ortiz-Lombardia M, Campanacci V, van Sinderen D, Cambillau C
    Proc Natl Acad Sci U S A 109 8954-8958
  25. Crystal Structure of ATV(ORF273), a New Fold for a Thermo- and Acido-Stable Protein from the Acidianus Two-Tailed Virus. (2012)
    Felisberto-Rodrigues C, Blangy S, Goulet A, Vestergaard G, Cambillau C, Garrett RA, Ortiz-Lombardia M
    PLoS One 7 e45847
  26. Crystal Structure of the VgrG1 Actin Cross-linking Domain of the Vibrio cholerae Type VI Secretion System. (2012)
    Durand E, Derrez E, Audoly G, Spinelli S, Ortiz-Lombardia M, Raoult D, Cascales E, Cambillau C
    J Biol Chem 287 38190-9
  27. A family GH51 α-L-arabinofuranosidase from Pleurotus ostreatus: identification, recombinant expression and characterization. (2012)
    Amore A, Amoresano A, Birolo L, Henrissat B, Leo G, Palmese A, Faraco V
    Appl Microbiol Biotechnol 94 995-1006
  28. Transcriptome analysis of Stagonospora nodorum: gene models, effectors, metabolism and pantothenate dispensability. (2012)
    Ipcho SV, Hane JK, Antoni EA, Ahren D, Henrissat B, Friesen TL, Solomon PS, Oliver RP
    Mol Plant Pathol 13 531-545
  29. Genome sequence of the model medicinal mushroom Ganoderma lucidum. (2012)
    Chen S, Xu J, Liu C, Zhu Y, Nelson DR, Zhou S, Li C, Wang L, Guo X, Sun Y, Luo H, Li Y, Song J, Henrissat B, Levasseur A, Qian J, Li J, Luo X, Shi L, He L, Xiang L, Xu X, Niu Y, Li Q, Han MV, Yan H, Zhang J, Chen H, Lv A, Wang Z, Liu M, Schwartz DC, Sun C
    Nature Commun 3 913
  30. Genome-wide analysis of Acetivibrio cellulolyticus provides a blueprint of an elaborate cellulosome system. (2012)
    Dassa B, Borovok I, Lamed R, Henrissat B, Coutinho P, Hemme CL, Huang Y, Zhou J, Bayer EA
    BMC Genomics 13 210
  31. Bifidobacterium asteroides PRL2011 Genome Analysis Reveals Clues for Colonization of the Insect Gut. (2012)
    Bottacini F, Milani C, Turroni F, Sanchez B, Foroni E, Duranti S, Serafini F, Viappiani A, Strati F, Ferrarini A, Delledonne M, Henrissat B, Coutinho P, Fitzgerald GF, Margolles A, van Sinderen D, Ventura M
    PLoS One 7 e44229
  32. Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize. (2012)
    Suzuki H, Macdonald J, Syed K, Salamov A, Hori C, Aerts A, Henrissat B, Wiebenga A, Vankuyk PA, Barry K, Lindquist E, Labutti K, Lapidus A, Lucas S, Coutinho P, Gong Y, Samejima M, Mahadevan R, Abou-Zaid M, de Vries RP, Igarashi K, Yadav JS, Grigoriev IV, Master ER
    BMC Genomics 13 444
  33. Eukaryote to gut bacteria transfer of a glycoside hydrolase gene essential for starch breakdown in plants. (2012)
    Arias MC, Danchin EG, Coutinho P, Henrissat B, Ball S
    Mob Genet Elements 2 81-87
  34. Functional Analysis of Family GH36 α-Galactosidases from Ruminococcus gnavus E1: Insights into the Metabolism of a Plant Oligosaccharide by a Human Gut Symbiont. (2012)
    Cervera-Tison M, Tailford LE, Fuell C, Bruel L, Sulzenbacher G, Henrissat B, Berrin JG, Fons M, Giardina T, Juge N
    Appl Environ Microbiol 78 7720-7732
  35. Complex carbohydrate utilization by the healthy human microbiome. (2012)
    Cantarel BL, Lombard V, Henrissat B
    PLoS One 7 e28742
  36. Metabolic reconstruction for metagenomic data and its application to the human microbiome. (2012)
    Abubucker S, Segata N, Goll J, Schubert AM, Izard J, Cantarel BL, Rodriguez-Mueller B, Zucker J, Thiagarajan M, Henrissat B, White O, Kelley ST, Methe B, Schloss PD, Gevers D, Mitreva M, Huttenhower C
    PLoS Comput Biol 8 e1002358
  37. Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses. (2012)
    OConnell RJ, Thon MR, Hacquard S, Amyotte SG, Kleemann J, Torres MF, Damm U, Buiate EA, Epstein L, Alkan N, Altmuller J, Alvarado-Balderrama L, Bauser CA, Becker C, Birren BW, Chen Z, Choi J, Crouch JA, Duvick JP, Farman MA, Gan P, Heiman D, Henrissat B, Howard RJ, Kabbage M, Koch C, Kracher B, Kubo Y, Law AD, Lebrun MH, Lee YH, Miyara I, Moore N, Neumann U, Nordstrom K, Panaccione DG, Panstruga R, Place M, Proctor RH, Prusky D, Rech G, Reinhardt R, Rollins JA, Rounsley S, Schardl CL, Schwartz DC, Shenoy N, Shirasu K, Sikhakolli UR, Stuber K, Sukno SA, Sweigard JA, Takano Y, Takahara H, Trail F, van der Does HC, Voll LM, Will I, Young S, Zeng Q, Zhang J, Zhou S, Dickman MB, Schulze-Lefert P, Ver Loren van Themaat E, Ma LJ, Vaillancourt LJ
    Nature Genet 44 1060-1065
  38. Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5). (2012)
    Aspeborg H, Coutinho PM, Wang Y, Brumer H 3rd, Henrissat B
    BMC Evol Biol 12 186
  39. Degradation of different pectins by fungi: correlations and contrasts between the pectinolytic enzyme sets identified in genomes and the growth on pectins of different origin. (2012)
    Benoit I, Coutinho PM, Schols HA, Gerlach JP, Henrissat B, de Vries RP
    BMC Genomics 13 321
  40. The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. (2012)
    Floudas D, Binder M, Riley R, Barry K, Blanchette RA, Henrissat B, Martinez AT, Otillar R, Spatafora JW, Yadav JS, Aerts A, Benoit I, Boyd A, Carlson A, Copeland A, Coutinho PM, de Vries RP, Ferreira P, Findley K, Foster B, Gaskell J, Glotzer D, Gorecki P, Heitman J, Hesse C, Hori C, Igarashi K, Jurgens JA, Kallen N, Kersten P, Kohler A, Kues U, Kumar TK, Kuo A, LaButti K, Larrondo LF, Lindquist E, Ling A, Lombard V, Lucas S, Lundell T, Martin R, McLaughlin DJ, Morgenstern I, Morin E, Murat C, Nagy LG, Nolan M, Ohm RA, Patyshakuliyeva A, Rokas A, Ruiz-Duenas FJ, Sabat G, Salamov A, Samejima M, Schmutz J, Slot JC, St John F, Stenlid J, Sun H, Sun S, Syed K, Tsang A, Wiebenga A, Young D, Pisabarro A, Eastwood DC, Martin F, Cullen D, Grigoriev IV, Hibbett DS
    Science 336 1715-9
  41. Crystal structure of the DNA-bound VapBC2 antitoxin/toxin pair from Rickettsia felis. (2012)
    Mate MJ, Vincentelli R, Foos N, Raoult D, Cambillau C, Ortiz-Lombardia M
    Nucleic Acids Res 40 3245-58
  42. One-step generation of error-prone PCR libraries using Gateway technology. (2012)
    Gruet A, Longhi S, Bignon C
    Microb Cell Fact 11 14
  43. Plasticity in structural and functional interactions between the phosphoprotein and nucleoprotein of measles virus (2012)
    Shu Y, Habchi J, Costanzo S, Padilla A, Brunel J, Gerlier D, Oglesbee M and Longhi S
    J Biol Chem 287 11951-67
  44. Structural insights into antibody sequestering and neutralizing of Na+-channel alpha-type modulator from Old-World scorpion venom. (2012)
    Fabrichny IP, Mondielli G, Conrod S, Martin-Eauclaire MF, Bourne Y, Marchot P
    J Biol Chem 287 14136-48
  45. [Capping strategies in RNA viruses.] (2012)
    Bouvet M, Ferron F, Imbert I, Gluais L, Selisko B, Coutard B, Canard B, Decroly E
    Med Sci (Paris) 28 423-429
  46. Flacourtosides A-F, Phenolic Glycosides Isolated from Flacourtia ramontchi. (2012)
    Bourjot M, Leyssen P, Eydoux C, Guillemot JC, Canard B, Rasoanaivo P, Gueritte F, Litaudon M
    J Nat Prod 75 752-8
  47. Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen. (2012)
    Olson A, Aerts A, Asiegbu F, Belbahri L, Bouzid O, Broberg A, Canback B, Coutinho PM, Cullen D, Dalman K, Deflorio G, van Diepen LT, Dunand C, Duplessis S, Durling M, Gonthier P, Grimwood J, Fossdal CG, Hansson D, Henrissat B, Hietala A, Himmelstrand K, Hoffmeister D, Hogberg N, James TY, Karlsson M, Kohler A, Kues U, Lee YH, Lin YC, Lind M, Lindquist E, Lombard V, Lucas S, Lunden K, Morin E, Murat C, Park J, Raffaello T, Rouze P, Salamov A, Schmutz J, Solheim H, Stahlberg J, Velez H, de Vries RP, Wiebenga A, Woodward S, Yakovlev I, Garbelotto M, Martin F, Grigoriev IV, Stenlid J
    New Phytol 194 1001-1013
  48. Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis. (2012)
    Fernandez-Fueyo E, Ruiz-Duenas FJ, Ferreira P, Floudas D, Hibbett DS, Canessa P, Larrondo LF, James TY, Seelenfreund D, Lobos S, Polanco R, Tello M, Honda Y, Watanabe T, Watanabe T, San RJ, Kubicek CP, Schmoll M, Gaskell J, Hammel KE, St John FJ, Vanden Wymelenberg A, Sabat G, Splinter Bondurant S, Syed K, Yadav JS, Doddapaneni H, Subramanian V, Lavin JL, Oguiza JA, Perez G, Pisabarro AG, Ramirez L, Santoyo F, Master E, Coutinho PM, Henrissat B, Lombard V, Magnuson JK, Kues U, Hori C, Igarashi K, Samejima M, Held BW, Barry KW, Labutti KM, Lapidus A, Lindquist EA, Lucas SM, Riley R, Salamov AA, Hoffmeister D, Schwenk D, Hadar Y, Yarden O, de Vries RP, Wiebenga A, Stenlid J, Eastwood D, Grigoriev IV, Berka RM, Blanchette RA, Kersten P, Martinez AT, Vicuna R, Cullen D
    Proc Natl Acad Sci U S A 109 5458-5463
  49. Synthesis of 5' cap-0 and cap-1 RNAs using solid-phase chemistry coupled with enzymatic methylation by human (guanine-N7)-methyl transferase. (2012)
    Thillier Y, Decroly E, Morvan F, Canard B, Vasseur JJ, Debart F
    RNA 18 856-68
  50. Crystal Structure of Diedel, a Marker of the Immune Response of Drosophila melanogaster. (2012)
    Coste F, Kemp C, Bobezeau V, Hetru C, Kellenberger C, Imler JL, Roussel A
    PLoS One 7 e33416
  51. Carbohydrate-active enzymes revealed in Coptotermes formosanus (Isoptera: Rhinotermitidae) transcriptome. (2012)
    Zhang D, Lax AR, Henrissat B, Coutinho P, Katiya N, Nierman WC, Fedorova N
    Insect Mol Biol 21 235-245
  52. Single pH buffer refolding screen for protein from inclusion bodies. (2012)
    Coutard B, Danchin EG, Oubelaid R, Canard B, Bignon C
    Protein Expr Purif 82 352-359
  53. Structural biology of type VI secretion systems. (2012)
    Cascales E, Cambillau C
    Philos Trans R Soc Lond B Biol Sci 367 1102-11
  54. Protein candidates for the serodiagnosis of rickettsioses. (2012)
    Kowalczewska M, Vellaiswamy M, Nappez C, Vincentelli R, Scola BL, Raoult D
    FEMS Immunol Med Microbiol 64 130-3
  55. Protein candidates for Q fever serodiagnosis. (2012)
    Kowalczewska M, Nappez C, Vincentelli R, La Scola B, Raoult D
    FEMS Immunol Med Microbiol 64 140-2
  56. A selective reversible azapeptide inhibitor of human neutrophil proteinase 3 derived from a high affinity FRET substrate. (2012)
    Epinette C, Croix C, Jaquillard L, Marchand-Adam S, Kellenberger C, Lalmanach G, Cadene M, Viaud-Massuard MC, Gauthier F, Korkmaz B
    Biochem Pharmacol 83 788-96
  57. Binding of the RamR repressor to wild-type and mutated promoters of the RamA gene involved in efflux-mediated multidrug resistance in Salmonella enterica serovar Typhimurium. (2012)
    Baucheron S, Coste F, Canepa S, Maurel MC, Giraud E, Culard F, Castaing B, Roussel A, Cloeckaert A
    Antimicrob Agents Chemother 56 942-8
  58. The Measles Virus N(TAIL)-XD Complex: An Illustrative Example of Fuzziness. (2012)
    Longhi S
    Adv Exp Med Biol 725 126-41
  59. Genome analyses highlight the different biological roles of cellulases. (2012)
    Medie FM, Davies GJ, Drancourt M, Henrissat B
    Nat Rev Microbiol 10 227-234
  60. Cyanophora paradoxa genome elucidates origin of photosynthesis in algae and plants. (2012)
    Price DC, Chan CX, Yoon HS, Yang EC, Qiu H, Weber AP, Schwacke R, Gross J, Blouin NA, Lane C, Reyes-Prieto A, Durnford DG, Neilson JA, Lang BF, Burger G, Steiner JM, Loffelhardt W, Meuser JE, Posewitz MC, Ball S, Arias MC, Henrissat B, Coutinho PM, Rensing SA, Symeonidi A, Doddapaneni H, Green BR, Rajah VD, Boore J, Bhattacharya D
    Science 335 843-7
  61. SAMHD1 restricts the replication of human immunodeficiency virus type 1 by depleting the intracellular pool of deoxynucleoside triphosphates. (2012)
    Lahouassa H, Daddacha W, Hofmann H, Ayinde D, Logue EC, Dragin L, Bloch N, Maudet C, Bertrand M, Gramberg T, Pancino G, Priet S, Canard B, Laguette N, Benkirane M, Transy C, Landau NR, Kim B, Margottin-Goguet F
    Nat Immunol 13 223-8
  62. Compaction and binding properties of the intrinsically disordered C-terminal domain of Henipavirus nucleoprotein as unveiled by deletion studies (2012)
    Blocquel D, Habchi J, Gruet A, Blangy S and Longhi S
    Mol Biosyst 8 392-410
  63. Post-genomic analyses of fungal lignocellulosic biomass degradation reveal the unexpected potential of the plant pathogen Ustilago maydis. (2012)
    Couturier M, Navarro D, Olive C, Chevret D, Haon M, Favel A, Lesage-Meessen L, Henrissat B, Coutinho PM, Berrin JG
    BMC Genomics 13 57
  64. Crystal structure of Apis mellifera OBP14, a C-minus odorant-binding protein, and its complexes with odorant molecules. (2012)
    Spinelli S, Lagarde A, Iovinella I, Legrand P, Tegoni M, Pelosi P, Cambillau C
    Insect Biochem Mol Biol 42 41-50

2011

  1. The opening of the SPP1 bacteriophage tail, a prevalent mechanism in Gram-positive-infecting siphophages. (2011)
    Goulet A, Lai-Kee-Him J, Veesler D, Auzat I, Robin G, Shepherd DA, Ashcroft AE, Richard E, Lichiere J, Tavares P, Cambillau C, Bron P
    J Biol Chem 286 25397-405
  2. alpha-Galactosidase/sucrose kinase (AgaSK), a novel bifunctional enzyme from the human microbiome coupling galactosidase and kinase activities. (2011)
    Bruel L, Sulzenbacher G, Cervera Tison M, Pujol A, Nicoletti C, Perrier J, Galinier A, Ropartz D, Fons M, Pompeo F, Giardina T
    J Biol Chem 286 40814-23
  3. Monitoring structural transitions in IDPs using vibrational spectroscopy of cyanylated cysteine. (2011)
    Yang H, Habchi J, Longhi S and Londergan CH.
    Methods Mol Biol 895 245-70
  4. In vitro antiviral activities of extracts derived from Daucus maritimus seeds. (2011)
    Miladi S, Abid N, Debarnot C, Damak M, Canard B, Aouni M, Selmi B
    Nat Prod Res 26 1027-32
  5. Characterization of rickettsial adhesin Adr2 belonging to a new group of adhesins in alpha-proteobacteria. (2011)
    Vellaiswamy M, Kowalczewska M, Merhej V, Nappez C, Vincentelli R, Renesto P, Raoult D
    Microb Pathog 50 233-42
  6. The active conformation of human glucokinase is not altered by allosteric activators. (2011)
    Petit P, Antoine M, Ferry G, Boutin JA, Lagarde A, Gluais L, Vincentelli R, Vuillard L
    Acta Crystallogr D Biol Crystallogr 67 929-35
  7. A substrate-based approach to convert SerpinB1 into a specific inhibitor of proteinase 3, the Wegener's granulomatosis autoantigen. (2011)
    Jegot G, Derache C, Castella S, Lahouassa H, Pitois E, Jourdan ML, Remold-O'Donnell E, Kellenberger C, Gauthier F, Korkmaz B
    FASEB J 25 3019-31
  8. Chaperone role for proteins p618 and p892 in the extracellular tail development of Acidianus two-tailed virus. (2011)
    Scheele U, Erdmann S, Ungewickell EJ, Felisberto-Rodrigues C, Ortiz-Lombardia M, Garrett RA
    J Virol 85 4812-21
  9. Towards a structural comprehension of bacterial type VI secretion systems: characterization of the TssJ-TssM complex of an Escherichia coli pathovar. (2011)
    Felisberto-Rodrigues C, Durand E, Aschtgen MS, Blangy S, Ortiz-Lombardia M, Douzi B, Cambillau C, Cascales E
    PLoS Pathog 7 e1002386
  10. Effect of rickettsial toxin VapC on its eukaryotic host. (2011)
    Audoly G, Vincentelli R, Edouard S, Georgiades K, Mediannikov O, Gimenez G, Socolovschi C, Mege JL, Cambillau C, Raoult D
    PLoS One 6 e26528
  11. Construction of two Lactococcus lactis expression vectors combining the Gateway and the NIsin Controlled Expression systems. (2011)
    Douillard FP, Mahony J, Campanacci V, Cambillau C, van Sinderen D
    Plasmid 66 129-35
  12. Deciphering the Xcp Pseudomonas aeruginosa type II secretion machinery through multiple interactions with substrates. (2011)
    Douzi B, Ball G, Cambillau C, Tegoni M, Voulhoux R
    J Biol Chem 286 40792-801
  13. The Crystal Structure of Odorant Binding Protein 7 from Anopheles gambiae Exhibits an Outstanding Adaptability of Its Binding Site. (2011)
    Lagarde A, Spinelli S, Tegoni M, He X, Field L, Zhou JJ, Cambillau C
    J Mol Biol 414 401-12
  14. Conventional and unconventional mechanisms for capping viral mRNA. (2011)
    Decroly E, Ferron F, Lescar J, Canard B
    Nat Rev Microbiol 10 51-65
  15. Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts. (2011)
    Martens EC, Lowe EC, Chiang H, Pudlo NA, Wu M, McNulty NP, Abbott DW, Henrissat B, Gilbert HJ, Bolam DN, Gordon JI
    PLoS Biol 9 e1001221
  16. A thermostable GH45 endoglucanase from yeast: impact of its atypical multimodularity on activity. (2011)
    Couturier M, Feliu J, Haon M, Navarro D, Lesage-Meessen L, Coutinho PM, Berrin JG
    Microb Cell Fact 10 103
  17. Structural disorder within paramyxovirus nucleoproteins and phosphoproteins (2011)
    Habchi J and Longhi S
    Mol Biosyst 8 69-81
  18. Mutual effects of disorder and order in fusion proteins between intrinsically disordered domains and fluorescent proteins (2011)
    Lotti M and Longhi S
    Mol Biosyst 8 105-113
  19. Alkylated Flavanones from the Bark of Cryptocarya chartacea As Dengue Virus NS5 Polymerase Inhibitors. (2011)
    Allard PM, Dau ET, Eydoux C, Guillemot JC, Dumontet V, Poullain C, Canard B, Gueritte F, Litaudon M
    J Nat Prod 74 2446-53
  20. Dividing to unveil protein microheterogeneities: A Traveling Wave Ion Mobility study (2011)
    Halgand F, Habchi J, Cravello L, Martinho M, Guigliarelli B and Longhi S
    Anal Chem 83(19) 7306-15
  21. The impact of a consortium of fermented milk strains on the gut microbiome of gnotobiotic mice and monozygotic twins. (2011)
    McNulty NP, Yatsunenko T, Hsiao A, Faith JJ, Muegge BD, Goodman AL, Henrissat B, Oozeer R, Cools-Portier S, Gobert G, Chervaux C, Knights D, Lozupone CA, Knight R, Duncan AE, Bain JR, Muehlbauer MJ, Newgard CB, Heath AC, Gordon JI
    Sci Transl Med 3 106ra106
  22. Flavivirus NS3 and NS5 proteins interaction network: A high-throughput yeast two-hybrid screen. (2011)
    Le Breton M, Meyniel-Schicklin L, Deloire A, Coutard B, Canard B, de Lamballerie X, Andre P, Rabourdin-Combe C, Lotteau V, Davoust N
    BMC Microbiol 11 234
  23. Monalysin, a Novel ss-Pore-Forming Toxin from the Drosophila Pathogen Pseudomonas entomophila, Contributes to Host Intestinal Damage and Lethality. (2011)
    Opota O, Vallet-Gely I, Vincentelli R, Kellenberger C, Iacovache I, Gonzalez MR, Roussel A, van der Goot FG, Lemaitre B
    PLoS Pathog 7 e1002259
  24. Lactococcal Phage p2 ORF35-Sak3 is an ATPase involved in DNA recombination and AbiK mechanism. (2011)
    Scaltriti E, Launay H, Genois MM, Bron P, Rivetti C, Grolli S, Ploquin M, Campanacci V, Tegoni M, Cambillau C, Moineau S, Masson JY
    Mol Microbiol 80 102-16
  25. Structure-function analysis of grass clip serine protease involved in Drosophila toll pathway activation. (2011)
    Kellenberger C, Leone P, Coquet L, Jouenne T, Reichhart JM, Roussel A
    J Biol Chem 286 12300-7
  26. The Drosophila peptidoglycan-recognition protein LF interacts with peptidoglycan-recognition protein LC to downregulate the Imd pathway. (2011)
    Basbous N, Coste F, Leone P, Vincentelli R, Royet J, Kellenberger C, Roussel A
    EMBO Rep 12 327-33
  27. Structural basis for antiviral inhibition of the main protease 3C from human enterovirus 93. (2011)
    Costenaro L, Kaczmarska Z, Arnan C, Janowski R, Coutard B, Sola M, Gorbalenya AE, Norder H, Canard B, Coll M
    J Virol 85 10764-73
  28. High-throughput protein expression screening and purification in Escherichia coli. (2011)
    Vincentelli R, Cimino A, Geerlof A, Kubo A, Satou Y, Cambillau C
    Methods 55 65-72
  29. Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris . (2011)
    Berka RM, Grigoriev IV, Otillar R, Salamov A, Grimwood J, Reid I, Ishmael N, John T, Darmond C, Moisan MC, Henrissat B, Coutinho PM, Lombard V, Natvig DO, Lindquist E, Schmutz J, Lucas S, Harris P, Powlowski J, Bellemare A, Taylor D, Butler G, de Vries RP, Allijn IE, van den Brink J, Ushinsky S, Storms R, Powell AJ, Paulsen IT, Elbourne LD, Baker SE, Magnuson J, Laboissiere S, Clutterbuck AJ, Martinez D, Wogulis M, de Leon AL, Rey MW, Tsang A
    Nature Biotechnol 29 922-927
  30. The assembly mode of the pseudopilus: a hallmark to distinguish a novel secretion system subtype. (2011)
    Durand E, Alphonse S, Brochier-Armanet C, Ball G, Douzi B, Filloux A, Bernard C, Voulhoux R
    J Biol Chem 286 24407-16
  31. Structure of the minor pseudopilin XcpW from the Pseudomonas aeruginosa type II secretion system. (2011)
    Franz LP, Douzi B, Durand E, Dyer DH, Voulhoux R, Forest KT
    Acta Crystallogr D Biol Crystallogr 67 124-30
  32. The Cyst-Dividing Bacterium Ramlibacter tataouinensis TTB310 Genome Reveals a Well-Stocked Toolbox for Adaptation to a Desert Environment. (2011)
    De Luca G, Barakat M, Ortet P, Fochesato S, Jourlin-Castelli C, Ansaldi M, Py B, Fichant G, Coutinho PM, Voulhoux R, Bastien O, Marechal E, Henrissat B, Quentin Y, Noirot P, Filloux A, Mejean V, Dubow MS, Barras F, Barbe V, Weissenbach J, Mihalcescu I, Vermeglio A, Achouak W, Heulin T
    PLoS One 6 e23784
  33. A common evolutionary origin for tailed-bacteriophage functional modules and bacterial machineries. (2011)
    Veesler D, Cambillau C
    Microbiol Mol Biol Rev 75 423-33
  34. Expanding the molecular toolbox for Lactococcus lactis: construction of an inducible thioredoxin gene fusion expression system. (2011)
    Douillard FP, O'Connell-Motherway M, Cambillau C, van Sinderen D
    Microb Cell Fact 10 66
  35. Acyclic nucleoside thiophosphonates as potent inhibitors of HIV and HBV replication. (2011)
    Barral K, Weck C, Payrot N, Roux L, Durafour C, Zoulim F, Neyts J, Balzarini J, Canard B, Priet S, Alvarez K
    Eur J Med Chem 46 4281-8
  36. Carbohydrate-active enzymes from pigmented Bacilli: a genomic approach to assess carbohydrate utilization and degradation. (2011)
    Manzo N, D'Apuzzo E, Coutinho PM, Cutting SM, Henrissat B, Ricca E
    BMC Microbiol 11 198
  37. Crystal structure of α-galactosidase from Lactobacillus acidophilus NCFM: Insight into tetramer formation and substrate binding. (2011)
    Fredslund F, Hachem MA, Larsen RJ, Sorensen PG, Coutinho PM, Leggio LL, Svensson B
    J Mol Biol 412 466-480
  38. Genomic Analysis of the Necrotrophic Fungal Pathogens Sclerotinia sclerotiorum and Botrytis cinerea . (2011)
    Amselem J, Cuomo CA, van Kan JA, Viaud M, Benito EP, Couloux A, Coutinho PM, de Vries RP, Dyer PS, Fillinger S, Fournier E, Gout L, Hahn M, Kohn L, Lapalu N, Plummer KM, Pradier JM, Quevillon E, Sharon A, Simon A, Ten Have A, Tudzynski B, Tudzynski P, Wincker P, Andrew M, Anthouard V, Beever RE, Beffa R, Benoit I, Bouzid O, Brault B, Chen Z, Choquer M, Collemare J, Cotton P, Danchin EG, Da Silva C, Gautier A, Giraud C, Giraud T, Gonzalez C, Grossetete S, Guldener U, Henrissat B, Howlett BJ, Kodira C, Kretschmer M, Lappartient A, Leroch M, Levis C, Mauceli E, Neuveglise C, Oeser B, Pearson M, Poulain J, Poussereau N, Quesneville H, Rascle C, Schumacher J, Segurens B, Sexton A, Silva E, Sirven C, Soanes DM, Talbot NJ, Templeton M, Yandava C, Yarden O, Zeng Q, Rollins JA, Lebrun MH, Dickman M
    PLoS Genet 7 e1002230
  39. Comparative production analysis of three phlebovirus nucleoproteins under denaturing or non-denaturing conditions for crystallographic studies. (2011)
    Lantez V, Dalle K, Charrel R, Baronti C, Canard B, Coutard B
    PLoS Negl Trop Dis 5 e936
  40. Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens. (2011)
    Klosterman SJ, Subbarao KV, Kang S, Veronese P, Gold SE, Thomma BP, Chen Z, Henrissat B, Lee YH, Park J, Garcia-Pedrajas MD, Barbara DJ, Anchieta A, de Jonge R, Santhanam P, Maruthachalam K, Atallah Z, Amyotte SG, Paz Z, Inderbitzin P, Hayes RJ, Heiman DI, Young S, Zeng Q, Engels R, Galagan J, Cuomo CA, Dobinson KF, Ma LJ
    PLoS Pathog 7 e1002137
  41. The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi. (2011)
    Eastwood DC, Floudas D, Binder M, Majcherczyk A, Schneider P, Aerts A, Asiegbu FO, Baker SE, Barry K, Bendiksby M, Blumentritt M, Coutinho PM, Cullen D, de Vries RP, Gathman A, Goodell B, Henrissat B, Ihrmark K, Kauserud H, Kohler A, Labutti K, Lapidus A, Lavin JL, Lee YH, Lindquist E, Lilly W, Lucas S, Morin E, Murat C, Oguiza JA, Park J, Pisabarro AG, Riley R, Rosling A, Salamov A, Schmidt O, Schmutz J, Skrede I, Stenlid J, Wiebenga A, Xie X, Kues U, Hibbett DS, Hoffmeister D, Hogberg N, Martin F, Grigoriev IV, Watkinson SC
    Science 333 762-765
  42. Intrinsic disorder in measles virus nucleocapsids. (2011)
    Ringkjobing Jensen M, Communie G, Ribeiro EA, Martinez N, Desfosses A, Salmon L, Mollica L, Gabel F, Jamin M, Longhi S, Ruigrok R and Blackeldge M
    Proc Natl Acad Sci 108 9839-9844
  43. Crystallization and preliminary x-ray diffraction analysis of the hyperthermophilic Sulfolobus islandicus Lactonase (2011)
    Gotthard G, Hiblot J, Elias M, Chabriere E
    Acta F 67 354-7
  44. A novel, non-catalytic carbohydrate-binding modules displays specificity for galactose-containing polysaccharides through calcium-mediated oligomerization. (2011)
    Montanier CY, Correia MA, Flint JE, Zhu Y, McKee LS, Prates JA, Polizzi SJ, Coutinho PM, Lewis RJ, Henrissat B, Fontes CM, Gilbert HJ
    J Biol Chem 286 22499-22509
  45. Mimivirus shows dramatic genome reduction after intraamoebal culture. (2011)
    Boyer M, Azza S, Barrassi L, Klose T, Campocasso A, Pagnier I, Fournous G, Borg A, Robert C, Zhang X, Desnues C, Henrissat B, Rossmann MG, La Scola B, Raoult D
    Proc Natl Acad Sci U S A 108 10296-10301
  46. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis (2011)
    Goodwin SB, Ben M'Barek S, Dhillon B, Wittenberg AHJ, Crane CF, Hane JK, Foster AJ, Van der Lee TAJ, Grimwood J, Aerts A, Antoniw J, Bailey A, Bluhm B, Bowler J, Bristow J, van der Burgt A, Canto-Canche B, Churchill ACL, Conde-Ferraez L, Cools HJ, Coutinho PM, Csukai M, Dehal P, De Wit P, Donzelli B, van de Geest HC, van Ham RCHJ, Hammond-Kosack KE, Henrissat B, Kilian A, Kobayashi AK, Koopmann E, Kourmpetis V, Kuzniar A, Lindquist E, Lombard V, Maliepaard C, Martins N, Mehrabi R, Nap JPH, Ponomarenko A, Rudd JJ, Salamov A, Schmutz J, Schouten HJ, Shapiro H, Stergiopoulos I, Torriani SFF, Tu H, de Vries RP, Waalwijk C, Ware SB, Wiebenga A, Zwiers L-H, Oliver RP, Grigoriev IV, Kema GHJ
    PLoS Genet. 7(6) e1002070
  47. Crystal Structure and Functional Analysis of the SARS-Coronavirus RNA Cap 2'-O-Methyltransferase nsp10/nsp16 Complex. (2011)
    Decroly E, Debarnot C, Ferron F, Bouvet M, Coutard B, Imbert I, Gluais L, Papageorgiou N, Sharff A, Bricogne G, Ortiz-Lombardia M, Lescar J, Canard B
    PLoS Pathog 7 e1002059
  48. Mycobacterium tuberculosis Complex Mycobacteria as Amoeba-Resistant Organisms. (2011)
    Mba Medie F, Ben Salah I, Henrissat B, Raoult D, Drancourt M
    PLoS One 6 e20499
  49. Obligate biotrophy features unraveled by the genomic analysis of rust fungi. (2011)
    Duplessis S, Cuomo CA, Lin YC, Aerts A, Tisserant E, Veneault-Fourrey C, Joly DL, Hacquard S, Amselem J, Cantarel BL, Chiu R, Coutinho PM, Feau N, Field M, Frey P, Gelhaye E, Goldberg J, Grabherr MG, Kodira CD, Kohler A, Kues U, Lindquist EA, Lucas SM, Mago R, Mauceli E, Morin E, Murat C, Pangilinan JL, Park R, Pearson M, Quesneville H, Rouhier N, Sakthikumar S, Salamov AA, Schmutz J, Selles B, Shapiro H, Tanguay P, Tuskan GA, Henrissat B, Van de Peer Y, Rouze P, Ellis JG, Dodds PN, Schein JE, Zhong S, Hamelin RC, Grigoriev IV, Szabo LJ, Martin F
    Proc Natl Acad Sci U S A 108 9166-9171
  50. Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans. (2011)
    Muegge BD, Kuczynski J, Knights D, Clemente JC, Gonzalez A, Fontana L, Henrissat B, Knight R, Gordon JI
    Science 332 970-974
  51. Insights into plant biomass conversion from the genome of the anaerobic thermophilic bacterium Caldicellulosiruptor bescii DSM 6725. (2011)
    Dam P, Kataeva I, Yang SJ, Zhou F, Yin Y, Chou W, Poole FL 2nd, Westpheling J, Hettich R, Giannone R, Lewis DL, Kelly R, Gilbert HJ, Henrissat B, Xu Y, Adams MW
    Nucleic Acids Res 39 3240-3254
  52. The α-glucuronidase Agu1 from Schizophyllum commune is a member of a novel glycoside hydrolase family (GH115) (2011)
    Chong SL, Battaglia E, Coutinho PM, Henrissat B, Maija Tenkanen M, de Vries RP
    Appl. Microbiol. Biotechnol. 90 1323-1332
  53. Probing structural transitions in both structured and disordered proteins using site-directed spin-labeling EPR spectroscopy (2011)
    Longhi S, Belle V, Fournel A, Guigliarelli B and Carriere F
    Journal of Peptide Science 17(5) 315-28
  54. Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma. (2011)
    Kubicek CP, Herrera-Estrella A, Seidl-Seiboth V, Martinez DA, Druzhinina IS, Thon M, Zeilinger S, Casas-Flores S, Horwitz BA, Mukherjee PK, Mukherjee M, Kredics L, Alcaraz LD, Aerts A, Antal Z, Atanasova L, Cervantes-Badillo MG, Challacombe J, Chertkov O, McCluskey K, Coulpier F, Deshpande N, von Doehren H, Ebbole DJ, Esquivel-Naranjo EU, Fekete E, Flipphi M, Glaser F, Gomez-Rodriguez EY, Gruber S, Han C, Henrissat B, Hermosa R, Hernandez-Onate M, Karaffa L, Kosti I, Le Crom S, Lindquist E, Lucas S, Lubeck M, Lubeck PS, Margeot A, Metz B, Misra M, Nevalainen H, Omann M, Packer N, Perrone G, Uresti-Rivera EE, Salamov A, Schmoll M, Seiboth B, Shapiro H, Sukno S, Tamayo-Ramos JA, Tisch D, Wiest A, Wilkinson HH, Zhang M, Coutinho PM, Kenerley CM, Monte E, Baker SE, Grigoriev IV
    Genome Biol 12 R40
  55. Phylogenetic and gene-centric metagenomics of the canine intestinal microbiome reveals similarities with humans and mice. (2011)
    Swanson KS, Dowd SE, Suchodolski JS, Middelbos IS, Vester BM, Barry KA, Nelson KE, Torralba M, Henrissat B, Coutinho PM, Cann IK, White BA, Fahey GC Jr
    ISME J 5 639-649
  56. Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum. (2011)
    Sucgang R, Kuo A, Tian X, Salerno W, Parikh A, Feasley CL, Dalin E, Tu H, Huang E, Barry K, Lindquist E, Shapiro H, Bruce D, Schmutz J, Salamov A, Fey P, Gaudet P, Anjard C, Babu MM, Basu S, Bushmanova Y, van der Wel H, Katoh-Kurasawa M, Dinh C, Coutinho PM, Saito T, Elias M, Schaap P, Kay RR, Henrissat B, Eichinger L, Rivero F, Putnam NH, West CM, Loomis WF, Chisholm RL, Shaulsky G, Strassmann JE, Queller DC, Kuspa A, Grigoriev IV
    Genome Biol 12 R20
  57. Picornavirus non-structural proteins as targets for new anti-virals with broad activity. (2011)
    Norder H, De Palma AM, Selisko B, Costenaro L, Papageorgiou N, Arnan C, Coutard B, Lantez V, De Lamballerie X, Baronti C, Sola M, Tan J, Neyts J, Canard B, Coll M, Gorbalenya AE, Hilgenfeld R
    Antiviral Res 89(3) 204-218
  58. Genome and transcriptome analyses of the mountain pine beetle-fungal symbiont Grosmannia clavigera, a lodgepole pine pathogen. (2011)
    Diguistini S, Wang Y, Liao NY, Taylor G, Tanguay P, Feau N, Henrissat B, Chan SK, Hesse-Orce U, Alamouti SM, Tsui CK, Docking RT, Levasseur A, Haridas S, Robertson G, Birol I, Holt RA, Marra MA, Hamelin RC, Hirst M, Jones SJ, Bohlmann J, Breuil C
    Proc Natl Acad Sci U S A 108 2504-2509
  59. Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: an highly specialized approach to carbohydrate degradation depicted at genome level. (2011)
    Battaglia E, Benoit I, van den Brink J, Wiebenga A, Coutinho PM, Henrissat B, de Vries RP
    BMC Genomics 12 38
  60. Structural insights and ab initio sequencing within the DING proteins family (2011)
    Elias M, Liebschner D, Gotthard G, Chabriere E
    J. Synchrotron Rad 18(1) 45-9
  61. Podospora anserina hemicellulases potentiate Trichoderma reesei secretome for the saccharification of lignocellulosic biomass. (2011)
    Couturier M, Haon M, Coutinho PM, Henrissat B, Lesage-Meessen L, Berrin JG
    Appl Environ Microbiol 77 237-246
  62. Mycobacterium tuberculosis Rv1090 and Rv1987 encode functional b-glucan-targeting proteins (2011)
    Mba Medie F, Vincentelli R, Drancourt M, Henrissat B
    Prot Express. Purif. 75 172-176

2010

  1. Structural insights into the exquisite selectivity of neurexin/neuroligin synaptic interactions. (2010)
    Leone P, Comoletti D, Ferracci G, Conrod S, Garcia SU, Taylor P, Bourne Y, Marchot P
    EMBO J 29(14) 2461-71
  2. Crystal structure of Bacillus subtilis SPP1 phage gp23.1, a putative chaperone. (2010)
    Veesler D, Blangy S, Lichiere J, Ortiz-Lombardia M, Tavares P, Campanacci V, Cambillau C
    Protein Sci 19 1812-6
  3. Characterization of antigens for Q fever serodiagnostics. (2010)
    Sekeyova Z, Kowalczewska M, Vincentelli R, Decloquement P, Flores-Ramirez G, Skultety L, Raoult D
    Acta Virol 54 173-80
  4. 3'-Deoxy phosphoramidate dinucleosides as improved inhibitors of hepatitis C virus subgenomic replicon and NS5B polymerase activity. (2010)
    Priet S, Zlatev I, Barvik I, Geerts K, Leyssen P, Neyts J, Dutartre H, Canard B, Vasseur JJ, Morvan F, Alvarez K
    J Med Chem 53 6608-17
  5. Structure and molecular assignment of lactococcal phage TP901-1 baseplate. (2010)
    Bebeacua C, Bron P, Lai L, Vegge CS, Brondsted L, Spinelli S, Campanacci V, Veesler D, van Heel M, Cambillau C
    J Biol Chem 285 39079-86
  6. High affinity binding between Hsp70 and the C-terminal domain of the measles virus nucleoprotein requires an Hsp40 co-chaperone. (2010)
    Couturier M, Buccellato M, Costanzo S, Bourhis JM, Shu Y, Nicaise M, Desmadril M, Flaudrops C, Longhi S, Oglesbee M
    J Mol Recognit 23(3) 301-15
  7. A new system for expressing recombinant animal toxins in E. coli? (2010)
    Douzi B, Geerlof A, Gilles N, Darbon H, Marchot P, Vincentelli R
    In: Advances and new technologies in toxinology (Barbier J, Benoit E, Marchot P, Mattei C, Servent D, eds), pp. 149-152, Collection Rencontres en Toxinologie, Publications de la SFET, Ch�tenay-Malabry, France.
  8. Generation of anti-DC-SIGN monoclonal antibodies capable of blocking HIV-1 gp120 binding and reactive on formalin-fixed tissue. (2010)
    Canard B, Vachon H, Fontaine T, Pin JJ, Paul S, Genin C, Mueller CG
    Immunol Lett 5(1-2) 165-72
  9. Conformational analysis of the partially disordered measles virus NTAIL-XD complex by SDSL EPR spectroscopy (2010)
    Kavalenka A, Urbancic I, Belle V, Rouger S, Costanzo S, Kure S, Fournel A, Longhi S, Guigliarelli B and Strancar J.
    Biophys J 98 1055-1064
  10. Structure and Functionality in Flavivirus Ns-Proteins: Perspectives for Drug Design. (2010)
    Bollati M, Alvarez K, Assenberg R, Baronti C, Canard B, Cook S, Coutard B, Decroly E, De Lambellerie X, Gould EA, Grard G, Grimes JM, Hilgenfeld R, Jansson AM, Malet H, Mancini EJ, Mastrangelo E, Mattevi A, Milani M, Moureau G, Neyts J, Owens RJ, Ren J, Selisko B, Speroni S, Steuber H, Stuart DI, Unge T, Bolognesi M
    Antiviral Res 87(2) 125-48
  11. Eukaryotic DING proteins are endogenous: an immunohistological study in mouse tissues (2010)
    Collombet JM, Elias M, Gotthard G, Four E, Renault F, Joffre A, Baubichon D, Rochu D, Chabriere E
    Plos One 5(2) e9099
  12. The VIZIER Project: Overview; Expectations; and Achievements. (2010)
    Coutard B, Canard B
    Antiviral Res 87(2) 85-94
  13. beta-Glycosyl azides as substrates for a-glycosynthases: preparation of efficient alpha-L-fucosynthases. (2010)
    Cobucci-Pnzano B, Conte F, Bedini E, Corsaro MM, Parrili M, Sulzenbacher G, Lipski A, Dal Piaz F, Lepore L, Rossi M, Moracci M
    Chem Biol 16 1097-1108
  14. How disorder influences order and vice versa: mutual effects in fusion proteins containing an intrinsically disordered and a globular protein (2010)
    Sambi I, Gatti-Lafranconi P, Longhi S and Lotti M
    FEBS J 277(21) 4438-51
  15. Solution and electron microscopy characterization of lactococcal phage baseplates expressed in Escherichia coli. (2010)
    Campanacci V, Veesler D, Lichiere J, Blangy S, Sciara G, Moineau S, van Sinderen D, Bron P, Cambillau C
    J Struct Biol 172(1) 75-84
  16. High yield synthesis, purification and characterisation of the RNase L activators 5'-triphosphate 2'-5'-oligoadenylates. (2010)
    Morin B, Rabah N, Boretto-Soler J, Tolou H, Alvarez K, Canard B
    Antiviral Res 87(3) 345-52
  17. Crystal Structure of the GalNAc/Gal-Specific Agglutinin from the Phytopathogenic Ascomycete Sclerotinia sclerotiorum Reveals Novel Adaptation of a beta-Trefoil Domain. (2010)
    Sulzenbacher G, Roig-Zamboni V, Peumans WJ, Rouge P, Van Damme EJ, Bourne Y
    J Mol Biol 400 715-22
  18. D-maurocalcine, a pharmacologically-inert efficient cell penetrating peptide analogue. (2010)
    Poillot C, Dridi K, Bichraoui H, Pecher J, Alphonse S, Douzi B, Ronjat M, Darbon H, De Waard M
    J Biol Chem 285(44) 34168-80
  19. Probing structural transitions in the intrinsically disordered C-terminal domain of the measles virus nucleoprotein by vibrational spectroscopy of cyanylated cysteines. (2010)
    Bischak CG, Longhi S, Snead DM, Costanzo S, Terrer E, Londergan CH
    Biophys J 99(5) 1676-83
  20. Crystal structure of bacteriophage SPP1 distal tail protein (GP 19.1): a baseplate hub paradigm in gram+ infecting phages. (2010)
    Veesler D, Robin G, Lichiere J, Auzat I, Tavares P, Bron P, Campanacci V, Cambillau C
    J Biol Chem 285 36666-73
  21. The lactococcal abortive infection protein AbiV interacts directly with the phage protein SaV and prevents translation of phage proteins. (2010)
    Haaber J, Samson JE, Labrie SJ, Campanacci V, Cambillau C, Moineau S, Hammer K
    Appl Environ Microbiol 76(21) 7085-92
  22. Conformational remodeling of femtomolar inhibitor-acetylcholinesterase complexes in the crystalline state (2010)
    Bourne Y, Radic Z, Taylor P, Marchot P
    J Am Chem Soc 132 18292-300
  23. Paradoxal conservation of a set of three cellulose-targeting genes in Mycobacterium tuberculosis complex organisms. (2010)
    Mba Medie F, Ben Salah I, Drancourt M, Henrissat B
    Microbiology 156 1468-75
  24. Structure of a polyisoprenoid binding domain from Saccharophagus degradans implicated in plant cell wall breakdown. (2010)
    Vincent F, Molin DD, Weiner RM, Bourne Y, Henrissat B
    FEBS Lett 584 1577-84
  25. Genome Announcement: Sequencing of Multiple Clostridia Genomes Related to Biomass Conversion and Biofuels Production. (2010)
    Hemme CL, Mouttaki H, Lee YJ, Goodwin L, Lucas S, Copeland A, Lapidus A, Glavina Del Rio T, Tice H, Saunders E, Brettin T, Detter JC, Han CS, Pitluck S, Land ML, Hauser LJ, Krypides N, Mikhailova N, He Z, Wu L, Van Nostrand JD, Henrissat B, He Q, Lawson PA, Tanner RS, Lynd LR, Wiegel J, Fields MW, Arkin AP, Schadt CW, Stevenson BS, McInerney MJ, Yang Y, Dong H, Huhnke RL, Mielenz JR, Ding SY, Himmel ME, Taghavi S, van der Lelie D, Rubin EM, Zhou J
    J Bacteriol 192 6494-6496
  26. A hierarchical classification of polysaccharide lyases for glycogenomics (2010)
    Lombard V, Bernard T, Rancurel C, Brumer H, Coutinho PM, Henrissat B
    Biochem. J. 432 437-444
  27. Preliminary insights into the non structural protein 3 macro domain of the Mayaro virus by powder diffraction (2010)
    Papageorgiou N, Watier Y, Saunders L, Coutard B, Lantez V, Gould E.A, Fitch A.N, Wright J.P, Canard B, Margiolaki I
    Z. Kristallogr. 225 576-580
  28. Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: insights into their environmental niche. (2010)
    Purushe J, Fouts DE, Morrison M, White BA, Mackie RI, Coutinho PM, Henrissat B, Nelson KE
    Microb Ecol 60 721-729
  29. Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes. (2010)
    Tasse L, Bercovici J, Pizzut-Serin S, Robe P, Tap J, Klopp C, Cantarel BL, Coutinho PM, Henrissat B, Leclerc M, Dore J, Monsan P, Remaud-Simeon M, Potocki-Veronese G
    Genome Res 20 1605-1612
  30. Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes. (2010)
    Danchin EG, Rosso MN, Vieira P, de Almeida-Engler J, Coutinho PM, Henrissat B, Abad P
    Proc Natl Acad Sci U S A 107 17651-17656
  31. The 2C putative helicase of echovirus 30 adopts a hexameric ring-shaped structure (2010)
    Papageorgiou N, Coutard B, Lantez V, Gautron E, Chauvet O, Baronti C, Norder H, de Lamballerie X, Heresanu N, Ferte N, Veesler S, Gorbalenya AE, Canard B
    Acta Crystallogr D Biol Crystallogr D66 1116-1120
  32. Viewing the human microbiome through three-dimensional glasses: integrating structural and functional studies to better define the properties of myriad carbohydrate-active enzymes. (2010)
    Turnbaugh PJ, Henrissat B, Gordon JI
    Acta Crystallogr Sect F Struct Biol Cryst Commun 66 1261-4
  33. The N-terminal domain of the arenavirus L protein is an RNA endonuclease essential in mRNA transcription. (2010)
    Morin B, Coutard B, Lelke M, Ferron F, Kerber R, Jamal S, Frangeul A, Baronti C, Charrel R, de Lamballerie X, Vonrhein C, Lescar J, Bricogne G, Gunther S, Canard B
    PLoS Pathog 6 pii: e1001038
  34. Genome sequence of the model mushroom Schizophyllum commune (2010)
    Ohm RA, de Jong JF, Lugones LG, Aerts A, Kothe E, Stajich JE, de Vries RP, Record E, Levasseur A, Baker SE, Bartholomew KA, Coutinho PM, Erdmann S, Fowler TJ, Gathman AC, Lombard V, Henrissat B, Knabe N, Kues U, Lilly WW, Lindquist E, Lucas S, Magnuson JK, Piumi F, Raudaskoski M, Salamov A, Schmutz J, Schwarze FW, Vankuyk PA, Horton JS, Grigoriev IV, Wosten HA
    Nat Biotechnol 28 957-963
  35. Solution structure of the C-terminal X domain of the Measles Virus Phosphoprotein and Interaction with the Intrinsically Disordered C-terminal Domain of the Nucleoprotein (2010)
    Gely S, Lowry DF, Bernard C, Jensen MR, Blackledge M, Costanzo S, Bourhis JM, Darbon H, Daughdrill G, Longhi S
    J Mol Recognit 23 435-447
  36. Structure-function relationships of the alpha/beta-hydrolase fold domain of neuroligin: A comparison with acetylcholinesterase. (2010)
    Leone P, Comoletti D, Taylor P, Bourne Y, Marchot P
    Chem Biol Interact 187(1-3) 49-55
  37. Genomics and structure/function studies of Rhabdoviridae proteins involved in replication and transcription. (2010)
    Assenberg R, Delmas O, Morin B, Graham SC, De Lamballerie X, Laubert C, Coutard B, Grimes JM, Neyts J, Owens RJ, Brandt BW, Gorbalenya A, Tucker P, Stuart DI, Canard B, Bourhy H
    Antiviral Res 87 149-61
  38. Practical application of bioinformatics by the multidisciplinary VIZIER consortium. (2010)
    Gorbalenya AE, Lieutaud P, Harris M, Coutard B, Canard B, Kleywegt GK, Kravchenko AA, Samborskiy DV, Sidorov IA, Leontovich AM, Jones TA
    Antiviral Res 87(2): 95-110
  39. Structural determinants in phycotoxins and AChBP conferring high affinity binding and nAChR antagonism (2010)
    Bourne Y, Radic Z, Araoz R, Talley TT, Benoit E, Servent D, Taylor P, Molgo J, Marchot P
    Proc Natl Acad Sci U S A 107(13) 6076-81
  40. Structural insights into the catalytic mechanism of bacterial guanosine-diphospho-D-mannose pyrophosphorylase and its regulation by divalent ions. (2010)
    Pelissier MC, Lesley SA, Kuhn P, Bourne Y
    J Biol Chem 285(35) 27468-76
  41. Dengue virus replicons: production of an interserotypic chimera and cell lines from different species, and establishment of a cell-based fluorescent assay to screen inhibitors, validated by the evaluation of ribavirin's activity. (2010)
    Masse N, Davidson A, Ferron F, Alvarez K, Jacobs M, Romette JL, Canard B, Guillemot JC
    Antiviral Res 86 296-305
  42. Flexibility between the protease and helicase domains of the dengue virus NS3 protein conferred by the linker region and its functional implications. (2010)
    Luo D, Wei N, Doan DN, Paradkar PN, Chong Y, Davidson AD, Kotaka M, Lescar J, Vasudevan SG
    J Biol Chem 285 18817-27
  43. Spatial (Tbata) expression in mature medullary thymic epithelial cells. (2010)
    Saade M, Irla M, Yammine M, Boulanger N, Victorero G, Vincentelli R, Penninger JM, Hollander GA, Chauvet S, Nguyen C
    Eur J Immunol 40 530-8
  44. Abundance and Diversity of Dockerin-Containing Proteins in the Fiber-Degrading Rumen Bacterium, Ruminococcus flavefaciens FD-1. (2010)
    Rincon MT, Dassa B, Flint HJ, Travis AJ, Jindou S, Borovok I, Lamed R, Bayer EA, Henrissat B, Coutinho PM, Antonopoulos DA, Berg Miller ME, White BA
    PLoS ONE 5(8) e12476
  45. Signature active site architectures illuminate the molecular basis for ligand specificity in family 35 carbohydrate binding modules (2010)
    Correia MA, Abbott DW, Gloster TM, Ondina Fernandes V, Prates JA, Montanier C, Dumon C, Williamson MP, Tunnicliffe RB, Liu Z, Flint J, Davies GJ, Henrissat B, Coutinho PM, Fontes CM, Gilbert HJ
    Biochemistry 49 6193-6205
  46. Structural Disorder within Henipavirus Nucleoprotein and Phosphoprotein: From Predictions to Experimental Assessment. (2010)
    Habchi J, Mamelli L, Darbon H, Longhi S
    PLoS One 5 e11684
  47. Mammalian G protein-coupled receptor expression in Escherichia coli: II. Refolding and biophysical characterization of mouse cannabinoid receptor 1 and human parathyroid hormone receptor 1. (2010)
    Michalke K, Huyghe C, Lichiere J, Graviere ME, Siponen M, Sciara G, Lepaul I, Wagner R, Magg C, Rudolph R, Cambillau C, Desmyter A
    Anal Biochem 401 74-80
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    Belle V, Rouger S, Costanzo S, Longhi S and Fournel A
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    Longhi S, Oglesbee M
    Protein Pept Lett 17(8) 961-78
  50. Instrumental Analysis of Intrinsically Disordered Proteins: Assessing Structure and Conformation (2010)
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  51. Genome sequence of the necrotrophic plant pathogen, Pythium ultimum, reveals original pathogenicity mechanisms and effector repertoire. (2010)
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    Turnbaugh PJ, Quince C, Faith JJ, McHardy AC, Yatsunenko T, Niazi F, Affourtit J, Egholm M, Henrissat B, Knight R, Gordon JI
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  53. Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis (2010)
    Martin F, Kohler A, Murat C, Balestrini R, Coutinho PM, Jaillon O, Montanini B, Morin E, Noel B, Percudani R, Porcel B, Rubini A, Amicucci A, Amselem J, Anthouard V, Arcioni S, Artiguenave F, Aury JM, Ballario P, Bolchi A, Brenna A, Brun A, Buée M, Cantarel B, Chevalier G, Couloux A, Da Silva C, Denoeud F, Duplessis S, Ghignone S, Hilselberger B, Iotti M, Marçais B, Mello A, Miranda M, Pacioni G, Quesneville H, Riccioni C, Ruotolo R, Splivallo R, Stocchi V, Tisserant E, Viscomi AR, Zambonelli A, Zampieri E, Henrissat B, Lebrun MH, Paolocci F, Bonfante P, Ottonello S, Wincker P
    Nature 464 1033-1038
  54. A new archaeal β-glycosidase from Sulfolobus solfataricus: Seeding a novel retaining β-glycan-specific glycoside hydrolase family along with the human non-lysosomal glucosylceramidase GBA2. (2010)
    Cobucci-Ponzano B, Aurilia V, Riccio G, Henrissat B, Coutinho PM, Strazzulli A, Padula A, Corsaro MM, Pieretti G, Pocsfalvi G, Fiume I, Cannio R, Rossi M, Moracci M
    J Biol Chem 285 20691-20703
  55. Crystal structure of Bacillus subtilis SPP1 phage gp22 shares fold similarity with a domain of lactococcal phage p2 RBP. (2010)
    Veesler D, Blangy S, Spinelli S, Tavares P, Campanacci V, Cambillau C
    Protein Sci 19 1439-1443
  56. Distinct oligomeric forms of the Pseudomonas aeruginosa RetS sensor domain modulate accessibility to the ligand binding site. (2010)
    Vincent F, Round A, Reynaud A, Bordi C, Filloux A, Bourne Y
    Environ Microbiol 12 1775-86
  57. Structure of lactococcal phage p2 baseplate and its mechanism of activation. (2010)
    Sciara G, Bebeacua C, Bron P, Tremblay D, Ortiz-Lombardia M, Lichiere J, van Heel M, Campanacci V, Moineau S, Cambillau C
    Proc Natl Acad Sci U S A 107 6852-7
  58. In vitro reconstitution of SARS-coronavirus mRNA cap methylation. (2010)
    Bouvet M, Debarnot C, Imbert I, Selisko B, Snijder EJ, Canard B, Decroly E
    PLoS Pathog 6 e1000863
  59. Structure of the Pseudomonas aeruginosa XcpT pseudopilin, a major component of the Type II Secretion System. (2010)
    Alphonse S, Durand E, Douzi B, Waegele B, Darbon H, Filloux A, Voulhoux R, Bernard C
    J Struct Biol 169 75-80
  60. ORF 157 from the Archaeal Virus AFV1 Defines a New Class of Nuclease. (2010)
    Goulet A, Redder P, Pina M, Prangishvili D, Vera L, Lichiere J, Leulliot N, van Tilbeurgh H, Ortiz-Lombardia M, Campanacci V, Cambillau C
    J Virol 84 5025-31
  61. Deciphering the function of lactococcal phage ul36 Sak domains. (2010)
    Scaltriti E, Moineau S, Launay H, Masson JY, Rivetti C, Ramoni R, Campanacci V, Tegoni M, Cambillau C
    J Struct Biol 170 462-9
  62. Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. (2010)
    Ma LJ, van der Does HC, Borkovich KA, Coleman JJ, Daboussi MJ, Di Pietro A, Dufresne M, Freitag M, Grabherr M, Henrissat B, Houterman PM, Kang S, Shim WB, Woloshuk C, Xie X, Xu JR, Antoniw J, Baker SE, Bluhm BH, Breakspear A, Brown DW, Butchko RA, Chapman S, Coulson R, Coutinho PM, Danchin EG, Diener A, Gale LR, Gardiner DM, Goff S, Hammond-Kosack KE, Hilburn K, Hua-Van A, Jonkers W, Kazan K, Kodira CD, Koehrsen M, Kumar L, Lee YH, Li L, Manners JM, Miranda-Saavedra D, Mukherjee M, Park G, Park J, Park SY, Proctor RH, Regev A, Ruiz-Roldan MC, Sain D, Sakthikumar S, Sykes S, Schwartz DC, Turgeon BG, Wapinski I, Yoder O, Young S, Zeng Q, Zhou S, Galagan J, Cuomo CA, Kistler HC, Rep M
    Nature 464 367-73
  63. Conformational disorder. (2010)
    Longhi S, Lieutaud P, Canard B
    Methods Mol Biol 609 307-25
  64. Synthesis and antiviral activity of boranophosphonate isosteres of AZT and d4T monophosphates. (2010)
    Barral K, Priet S, De Michelis C, Sire J, Neyts J, Balzarini J, Canard B, Alvarez K
    Eur J Med Chem 45 849-56
  65. Getting the best out of long-wavelength X-rays: de novo chlorine/sulfur SAD phasing of a structural protein from ATV. (2010)
    Goulet A, Vestergaard G, Felisberto-Rodrigues C, Campanacci V, Garrett RA, Cambillau C, Ortiz-Lombardia M
    Acta Crystallogr D Biol Crystallogr 66 304-8
  66. Modulation of cellulosome composition in Clostridium cellulolyticum : adaptation to the polysaccharide environment revealed by proteomic and carbohydrate-active enzyme analyses. (2010)
    Blouzard JC, Coutinho PM, Fierobe HP, Henrissat B, Lignon S, Tardif C, Pages S, Philip PD
    Proteomics 10 541-554
  67. A novel alpha-N-acetylgalactosaminidase family with an NAD+-dependent catalytic mechanism suitable for enzymatic removal of blood group A antigens. (2010)
    Sulzenbacher G, Liu QP, Bennett EP, Levery SB, Bourne Y, Ponchel G, Clausen H, Henrissat B
    Biocatal Biotransfor 28 22-32
  68. Biochemical characterization of the (nucleoside-2\'O)-methyltransferase activity of dengue virus protein NS5 using purified capped RNA oligonucleotides 7MeGpppACn and GpppACn. (2010)
    Selisko B, Peyrane FF, Canard B, Alvarez K, Decroly E
    J Gen Virol 91 112-21

2009

  1. Integrative analytical approach by capillary electrophoresis and kinetics under high pressure optimized for deciphering intrinsic and extrinsic cofactors that modulate activity and stability of human paraoxonase (PON1). (2009)
    Renault F, Carus T, Clery-Barraud C, Elias M, Chabriere E, Masson P, Rochu D
    J Chromatogr B Analyt Technol Biomed Life Sci 878 1349-55
  2. Structure of the C-terminal domain of nsp4 from feline coronavirus. (2009)
    Manolaridis I, Wojdyla JA, Panjikar S, Snijder EJ, Gorbalenya AE, Berglind H, Nordlund P, Coutard B, Tucker PA
    Acta Crystallogr D Biol Crystallogr 65 839-46
  3. Understanding the alphaviruses: Recent research on important emerging pathogens and progress towards their control. (2009)
    Gould EA, Coutard B, Malet H, Morin B, Jamal S, Weaver S, Gorbalenya A, Moureau G, Baronti C, Delogu I, Forrester N, Khasnatinov M, Gritsun T, de Lamballerie X, Canard B
    Antiviral Res 87(2) 111-24
  4. Crystallographic structure of ubiquitin in complex with cadmium ions. (2009)
    Qureshi IA, Ferron F, Seh CC, Cheung P, Lescar J
    BMC Res Notes 2 251
  5. A protein encoded by a new family of mobile elements from Euryarchaea exhibits three domains with novel folds. (2009)
    Keller J, Leulliot N, Soler N, Collinet B, Vincentelli R, Forterre P, van Tilbeurgh H
    Protein Sci 18 850-5
  6. Transcriptional profiling of cellulase and expansin-related genes in a hypercellulolytic Trichoderma reesei. (2009)
    Verbeke J, Coutinho P, Mathis H, Quenot A, Record E, Asther M, Heiss-Blanquet S
    Biotechnol Lett 31 1399-1405
  7. Overlapping genes produce proteins with unusual sequence properties and offer insight into de novo protein creation. (2009)
    Rancurel C, Khosravi M, Dunker KA, Romero PR, Karlin D
    J Virol 83(20) 10719-36
  8. Structure of the methyltransferase domain from the Modoc virus, a flavivirus with no known vector. (2009)
    Jansson AM, Jakobsson E, Johansson P, Lantez V, Coutard B, de Lamballerie X, Unge T, Jones TA
    Acta Crystallogr D Biol Crystallogr 65 796-803
  9. Structure of the X (ADRP) domain of nsp3 from feline coronavirus. (2009)
    Wojdyla JA, Manolaridis I, Snijder EJ, Gorbalenya AE, Coutard B, Piotrowski Y, Hilgenfeld R, Tucker PA
    Acta Crystallogr D Biol Crystallogr 65 1292-300
  10. A Genomic View of Glycobiology (2009)
    Henrissat B, Surolia A, Stanley P
    In: Varki A, Cummings RD, Esko JD, Freeze HH, Stanley P, Bertozzi CR, Hart GW, Etzler ME, editors. Essentials of Glycobiology. 2nd edition, Cold Spring Harbor Laboratory Press. Chapter 7 89-99
  11. beta-Glycosyl azides as substrates for alpha-glycosynthases: preparation of efficient alpha-L-fucosynthases. (2009)
    Cobucci-Ponzano B, Conte F, Bedini E, Corsaro MM, Parrilli M, Sulzenbacher G, Lipski A, Dal Piaz F, Lepore L, Rossi M, Moracci M
    Chem Biol 16 1097-108
  12. Crystal structure of AFV1-102, a protein from the acidianus filamentous virus 1. (2009)
    Keller J, Leulliot N, Collinet B, Campanacci V, Cambillau C, Pranghisvilli D, van Tilbeurgh H
    Protein Sci 18 845-849
  13. Recognition of RNA Cap in the Wesselsbron Virus NS5 Methyltransferase Domain: Implications for RNA-Capping Mechanisms in Flavivirus. (2009)
    Bollati M, Milani M, Mastrangelo E, Ricagno S, Tedeschi G, Nonnis S, Decroly E, Selisko B, de Lamballerie X, Coutard B, Canard B, Bolognesi M
    J Mol Biol 385 140-52
  14. First evidence for the salt-dependent folding and activity of an esterase from the halophilic archaea Haloarcula marismortui. (2009)
    Muller-Santos M, de Souza EM, Pedrosa Fde O, Mitchell DA, Longhi S, Carriere F, Canaan S, Krieger N
    BBA-MOL CELL BIOL L 1791 719-29
  15. Crystal structure of a chimeric receptor binding protein constructed from two lactococcal phages. (2009)
    Siponen M, Spinelli S, Blangy S, Moineau S, Cambillau C, Campanacci V
    J Bacteriol 191 3220-5
  16. Determination with maldi tof/tof of the extensive disulfide bonding in tarantula venom peptide PcFK1 (2009)
    Combes G, Bernard C, Choi SJ, Pimentel C, Darbon H, Waidelich D, Mestivier D, Camadro JM
    Eur J Mass Spectrom 15 517-529
  17. Carbohydrate-active enzymes database: principles and classification of glycosyltransferases. (2009)
    Coutinho PM, Rancurel C, Stam M, Bernard T, Couto F, Danchin EGJ, Henrissat B
    In Bioinformatics for Glycobiology and Glycomics: An Introduction. von der Lieth, W., Luetteke, T. and Frank, M. eds., John Wiley & Sons, Ltd 89-118
  18. Bacterial glycosidases for the enzymatic removal of blood group antigens (2009)
    Sulzenbacher G, Liu QP, Bennett EP, Spence J, Nudelman E, Levery SB, Bourne Y, Olsson ML, Henrissat B Clausen H
    8th Carbohydrate Bioengineering Meeting Ischia, Italie, Mai 2009.
  19. Acidianus filamentous virus 1 coat proteins display a helical fold spanning the filamentous archaeal viruses lineage. (2009)
    Goulet A, Blangy S, Redder P, Prangishvili D, Felisberto-Rodrigues C, Forterre P, Campanacci V, Cambillau C
    Proc Natl Acad Sci U S A 106 21155-60
  20. The crystal structure of ORF14 from Sulfolobus islandicus filamentous virus. (2009)
    Goulet A, Spinelli S, Blangy S, van Tilbeurgh H, Leulliot N, Basta T, Prangishvili D, Cambillau C, Campanacci V
    Proteins 76 1020-2
  21. The thermo- and acido-stable ORF-99 from the archaeal virus AFV1. (2009)
    Goulet A, Spinelli S, Blangy S, van Tilbeurgh H, Leulliot N, Basta T, Prangishvili D, Cambillau C, Campanacci V
    Protein Sci 18 1316-20
  22. Surfactant poloxamer 188 as a new crystallizing agent for urate oxydase (2009)
    Giffard M, Delfosse V, Sciara G, Mayer C, Cambillau C, El Hajji M, Castro B, Bonnete F
    Crystal growth and design 9 4199-4206
  23. Molecular basis for galactosylation of core fucose residues in invertebrates: Identification of Caenorhabditis elegans N-glycan core α-1,6-fucoside β-1,4-galactosyltransferase GALT-1 as a member of a novel glycosyltransferase family. (2009)
    Titz A, Butschi A, Henrissat B, Fan YY, Hennet T, Razzazi-Fazeli E, Hengartner MO, Wilson IB, Kuenzler M, Aebi M
    J Biol Chem 284 36223-33
  24. The Bifidobacterium dentium Bd1 genome sequence reflects its genetic adaptation to the human oral cavity. (2009)
    Ventura M, Turroni F, Zomer A, Foroni E, Giubellini V, Bottacini F, Canchaya C, Claesson MJ, He F, Mantzourani M, Mulas L, Ferrarini A, Gao B, Delledonne M, Henrissat B, Coutinho P, Oggioni M, Gupta RS, Zhang Z, Beighton D, Fitzgerald GF, O'Toole PW, van Sinderen D
    PLoS Genet 5(12) e1000785
  25. Interaction between the sifa virulence factor and its host target skip is essential for salmonella pathogenesis. (2009)
    Diacovich L, Dumont A, Lafitte D, Soprano E, Guilhon AA, Bignon C, Gorvel JP, Bourne Y, Meresse S
    J Biol Chem 284 33151-33156
  26. Structural determinants for interaction of partial agonists with acetylcholine binding protein and neuronal alpha7 nicotinic acetylcholine receptor. (2009)
    Hibbs RE, Sulzenbacher G, Shi J, Talley TT, Conrod S, Kem WR, Taylor P, Marchot P, Bourne Y
    EMBO J 28 3040-3051
  27. Crystal structure and function of a DARPin neutralizing inhibitor of lactococcal phage TP901-1: Comparison of DARPin and camelid VHH binding mode. (2009)
    Veesler D, Dreier B, Blangy S, Lichiere J, Tremblay D, Moineau S, Spinelli S, Tegoni M, Pluckthun A, Campanacci V, Cambillau C
    J Biol Chem 284 30718-30726
  28. The XcpV/GspI pseudopilin has a central role in the assembly of a quaternary complex within the T2SS pseudopilus. (2009)
    Douzi B, Durand E, Bernard C, Alphonse S, Cambillau C, Filloux A, Tegoni M, Voulhoux R
    J Biol Chem 284 34580-34589
  29. RNA-dependent RNA polymerases from flaviviruses and Picornaviridae. (2009)
    Lescar J, Canard B
    Curr Opin Struct Biol 19 759-767
  30. Monoclonal antibodies to the West Nile virus NS5 protein map to linear and conformational epitopes in the methyl transferase and RNA-dependant RNA polymerase domains. (2009)
    Hall RA, Tan SE, Selisko B, Slade R, Hobson-Peters J, Canard B, Hughes M, Leung JY, Balmori Melian E, Hall-Mendelin S, Pham KB, Clark DC, Prow NA, Khromykh AA
    J Gen Virol 90 2912-2922
  31. Rules governing selective protein carbonylation. (2009)
    Maisonneuve E, Ducret A, Khoueiry P, Lignon S, Longhi S, Talla E, Dukan S.
    PloS One 5;4(10) e7269
  32. Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae revealed by genome sequence analysis. (2009)
    McBride MJ, Xie G, Martens EC, Lapidus A, Henrissat B, Rhodes RG, Goltsman E, Wang W, Xu J, Hunnicutt DW, Staroscik AM, Hoover TR, Cheng YQ, Stein JL
    Appl Environ Microbiol 75 6864-6875
  33. Analysis of the Structural and Functional Diversity of Plant Cell Wall Specific Family 6 Carbohydrate Binding Modules. (2009)
    Abbott DW, Ficko-Blean E, van Bueren AL, Rogowski A, Cartmell A, Coutinho PM, Henrissat B, Gilbert HJ, Boraston AB
    Biochemistry 48 10395-10404
  34. For Whom the Bell Tolls? DING Proteins in Health and Disease. (2009)
    Berna, A; Bernier F, Chabriere E, Elias M, Scott K, Suh A
    Cell Mol Life Sci 66(14) 2205-18
  35. Evidence for Phosphatase Activity of p27SJ and its Impact on the Cell Cycle (2009)
    Darbinian N, Czernik M, Darbinyan A, Elias M, Chabriere E, Bonasu, S, Khalili K, Amini S
    J Cell Biochem 107 400-407
  36. Elucidation of the phosphate binding mode of DING proteins revealed by sub-Angstrom X-ray crystallography (2009)
    Liebschner D, Elias M, Moniot S, Fournier B, Scott K, Jelsch C, Guillot B, Lecomte C, Chabriere E
    J Am Chem Soc 13 7879-86
  37. Structure and function of phage p2 ORF34(p2), a new type of single-stranded DNA binding protein. (2009)
    Scaltriti E, Tegoni M, Rivetti C, Launay H, Masson JY, Magadan AH, Tremblay D, Moineau S, Ramoni R, Lichiere J, Campanacci V, Cambillau C, Ortiz-Lombardia M
    Mol Microbiol 73(6) 1156-70
  38. The genome of Nectria haematococca : contribution of supernumerary chromosomes to gene expansion. (2009)
    Coleman JJ, Rounsley SD, Rodriguez-Carres M, Kuo A, Wasmann CC, Grimwood J, Schmutz J, Taga M, White GJ, Zhou S, Schwartz DC, Freitag M, Ma LJ, Danchin EG, Henrissat B, Coutinho PM, Nelson DR, Straney D, Napoli CA, Barker BM, Gribskov M, Rep M, Kroken S, Molnar I, Rensing C, Kennell JC, Zamora J, Farman ML, Selker EU, Salamov A, Shapiro H, Pangilinan J, Lindquist E, Lamers C, Grigoriev IV, Geiser DM, Covert SF, Temporini E, Vanetten HD
    PLoS Genet 5 e1000618
  39. Modular organization of rabies virus phosphoprotein. (2009)
    Gerard FC, Ribeiro Ede A Jr, Leyrat C, Ivanov I, Blondel D, Longhi S, Ruigrok RW, Jamin M
    J Mol Biol 388 978-96
  40. The Crystal Structures of Chikungunya and Venezuelan Equine Encephalitis Virus nsP3 Macro Domains Define a Conserved Adenosine Binding Pocket. (2009)
    Malet H, Coutard B, Jamal S, Dutartre H, Papageorgiou N, Neuvonen M, Ahola T, Forrester N, Gould EA, Lafitte D, Ferron F, Lescar J, de Lamballerie X, Canard B
    J Virol 83(13) 6534-45
  41. Insecticidal peptides from the theraposid spider Brachypelma albiceps: An NMR-based model of Ba2. (2009)
    Corzo G, Bernard C, Clement H, Villegas E, Bosmans F, Tytgat J, Possani LD, Darbon H, Alagon A
    Biochim Biophys Acta 1794(8) 1190-6
  42. Queen bee pheromone binding protein ph induced domain-swapping favors pheromone release. (2009)
    Pesenti ME, Spinelli S, Bezirard V, Briand L, Pernollet JC, Campanacci V, Tegoni M, Cambillau C
    J Mol Biol 390(5) 981-90
  43. Identification of allosteric inhibitors blocking the Hepatitis C Virus polymerase NS5B in the RNA synthesis initiation step. (2009)
    Betzi S, Eydoux C, Bussetta C, Blemont M, Leyssen P, Debarnot C, Ben-Rahou M, Haiech J, Hibert M, Gueritte F, Grierson DS, Romette JL, Guillemot JC, Neyts J, Alvarez K, Morelli X, Dutartre H, Canard B
    Antiviral Res 84 48-59
  44. Diversity and strain specificity of plant cell wall degrading enzymes revealed by the draft genome of Ruminococcus flavefaciens FD-1. (2009)
    Berg Miller ME, Antonopoulos DA, Rincon MT, Band M, Bari A, Akraiko T, Hernandez A, Thimmapuram J, Henrissat B, Coutinho PM, Borovok I, Jindou S, Lamed R, Flint HJ, Bayer EA, White BA
    PLoS One 4 e6650
  45. Post-genomic insights into the plant polysaccharide degradation potential of Aspergillus nidulans and comparison to Aspergillus niger and Aspergillus oryzae (2009)
    Coutinho PM, Andersen MR, Kolenova K, vanKuyk PA, Benoit I, Gruben BS, Trejo Aguilar B, Visser H, van Solingen P, Pakula T, Seiboth B, Battaglia E, Aguilar Osorio G, de Jong JF, Ohm RA, Aguilar M, Henrissat B, Nielsen J, Stalbrand H, de Vries RP
    Fungal Genet Biol 46 S161-S169
  46. Flaviviral methyltransferase/RNA interaction: structural basis for enzyme inhibition. (2009)
    Milani M, Mastrangelo E, Bollati M, Selisko B, Decroly E, Bouvet M, Canard B, Bolognesi M
    Antiviral Res 83 28-34
  47. The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms). (2009)
    Yang JC, Madupu R, Durkin AS, Ekborg NA, Pedamallu CS, Hostetler JB, Radune D, Toms BS, Henrissat B, Coutinho PM, Schwarz S, Field L, Trindade-Silva AE, Soares CA, Elshahawi S, Hanora A, Schmidt EW, Haygood MG, Posfai J, Benner J, Madinger C, Nove J, Anton B, Chaudhary K, Foster J, Holman A, Kumar S, Lessard PA, Luyten YA, Slatko B, Wood N, Wu B, Teplitski M, Mougous JD, Ward N, Eisen JA, Badger JH, Distel DL
    PLoS One 4 e6085
  48. The interaction between the measles virus nucleoprotein and the Interferon Regulator Factor 3 relies on a specific cellular environment. (2009)
    Colombo M, Bourhis JM, Chamontin C, Soriano C, Villet S, Costanzo S, Couturier M, Belle V, Fournel A, Darbon H, Gerlier D, Longhi S
    Virol J 6 59
  49. Interaction between the C-terminal domains of N and P proteins of measles virus investigated by NMR. (2009)
    Bernard C, Gely S, Bourhis JM, Morelli X, Longhi S, Darbon H
    FEBS Lett 583 (7) 1084-9
  50. Revised Mimivirus major capsid protein sequence reveals intron-containing gene structure and extra domain. (2009)
    Azza S, Cambillau C, Raoult D, Suzan-Monti M
    BMC Mol Biol 10 39
  51. A pyrazolotriazolopyrimidinamine inhibitor of bovine viral diarrhea virus replication that targets the viral RNA-dependent RNA polymerase. (2009)
    Paeshuyse J, Letellier C, Froeyen M, Dutartre H, Vrancken R, Canard B, De Clercq E, Gueiffier A, Teulade JC, Herdewijn P, Puerstinger G, Koenen F, Kerkhofs P, Baraldi PG, Neyts J
    Antiviral Res 82 141-7
  52. The DING family of proteins: ubiquitous in eukaryotes, but where are the genes? (2009)
    Berna A, Scott K, Chabriere E, Bernier F
    Bioessays 31 570-80
  53. Structural determinants of the high thermal stability of SsoPox from the hyperthermophilic archeon Sulfolobus solfataricus (2009)
    Elias M, Pompea DV, Merone L, Graziano G, Dupuy J, Mandrich L, Carullo P, Fournier B, Rochu D, Rossi M, Masson P, Chabriere E, Manco G
    Extremophiles 13 461-70
  54. Mammalian G-protein-coupled receptor expression in Escherichia coli: I. High-throughput large-scale production as inclusion bodies. (2009)
    Michalke K, Graviere ME, Huyghe C, Vincentelli R, Wagner R, Pattus F, Schroeder K, Oschmann J, Rudolph R, Cambillau C, Desmyter A
    Anal Biochem 386 147-155
  55. Production and biophysical characterization of the CorA transporter from Methanosarcina mazei. (2009)
    Veesler D, Blangy S, Siponen M, Vincentelli R, Cambillau C, Sciara G
    Anal Biochem 388 115-121
  56. Structural and Biochemical Analysis of Human Pathogenic Astrovirus Serine Protease at 2.0 A Resolution. (2009)
    Speroni S, Rohayem J, Nenci S, Bonivento D, Robel I, Barthel J, Luzhkov VB, Coutard B, Canard B, Mattevi A
    J Mol Biol 387 1137-1152
  57. Crystal structure of a Methyltransferase from a No-Known-Vector Flavivirus. (2009)
    Bollati M, Milani M, Mastrangelo E, de Lambellarie X, Canard B, Bolognesi M
    Biochem Biophys Res Commun 382 200-204
  58. Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas (2009)
    Worden AZ, Lee JH, Mock T, Rouze P, Simmons MP, Aerts AL, Allen AE, Cuvelier ML, Derelle E, Everett MV, Foulon E, Grimwood J, Gundlach H, Henrissat B, Napoli C, McDonald SM, Parker MS, Rombauts S, Salamov A, Von Dassow P, Badger JH, Coutinho PM, Demir E, Dubchak I, Gentemann C, Eikrem W, Gready JE, John U, Lanier W, Lindquist EA, Lucas S, Mayer KFX, Moreau H, Not F, Otillar R, Panaud O, Pangilinan J, Paulsen I, Piegu B, Poliakov A, Robbens S, Schmutz J, Toulza E, Wyss T, Zelensky A, Zhou K, Armbrust EV, Bhattacharya D, Goodenough UW, Van de Peer Y, Grigoriev IV
    Science 324 268-272
  59. Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla. (2009)
    Mahowald MA, Rey FE, Seedorf H, Turnbaugh PJ, Fulton RS, Wollam A, Shah N, Wang C, Magrini V, Wilson RK, Cantarel BL, Coutinho PM, Henrissat B, Crock LW, Russell A, Verberkmoes NC, Hettich RL, Gordon JI
    Proc Natl Acad Sci U S A 106 5859-5864
  60. The 2008 update of the Aspergillus nidulans genome annotation: a community effort (2009)
    Wortman JR, Gilsenan JM, Joardar V, Deegan J, Clutterbuck J, Andersen MR, Archer D, Bencina M, Braus G, Coutinho P, von Dohren H, Doonan J, Driessen AJM, Durek P, Espeso E, Fekete E, Flipphi M, Garcia Estrada C, Geysens S, Goldman G, de Groot PWJ, Hansen K, Harris SD, Heinekamp T, Helmstaedt K, Henrissat B, Hofmann G, Homan T, Horio T, Horiuchi H, James S, Jones M, Karaffa L, Karanyi Z, Kato M, Keller N, Kelly DE, Kiel JAKW, Kim J-M, van der Klei IJ, Klis FM, Kovalchuk A, Krasevec N, Kubicek CP, Liu B, MacCabe A, Meyer V, Mirabito P, Miskei M, Mos M, Mullins J, Nelson DR, Nielsen J, Oakley BR, Osmani SA, Pakula T, Paszewski A, Paulsen I, Pilsyk S, Pocsi I, Punt PJ, Ram AFJ, Ren Q, Robellet X, Robson G, Seiboth B, van Solingen P, Specht T, Sun J, Taheri-Talesh N, Takeshita N, Ussery D, vanKuyk PA, Visser H, van de Vondervoort PJI, de Vries RP, Walton J, Xiang X, Xiong Y, Zeng AP, Brandt BW, Cornell MJ, van den Hondel CAMJJ, Visser J, Oliver SG, Turner G
    Fungal Genet Biol 46 S2-S13
  61. Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion. (2009)
    Martinez D, Challacombe J, Morgenstern I, Hibbett D, Schmoll M, Kubicek CP, Ferreira P, Ruiz-Duenas FJ, Martinez AT, Kersten P, Hammel KE, Wymelenberg AV, Gaskell J, Lindquist E, Sabat G, Bondurant SS, Larrondo LF, Canessa P, Vicuna R, Yadav J, Doddapaneni H, Subramanian V, Pisabarro AG, Lavin JL, Oguiza JA, Master E, Henrissat B, Coutinho PM, Harris P, Magnuson JK, Baker SE, Bruno K, Kenealy W, Hoegger PJ, Kues U, Ramaiya P, Lucas S, Salamov A, Shapiro H, Tu H, Chee CL, Misra M, Xie G, Teter S, Yaver D, James T, Mokrejs M, Pospisek M, Grigoriev IV, Brettin T, Rokhsar D, Berka R, Cullen D
    Proc Natl Acad Sci U S A 106 1954-1959
  62. Three genomes from the phylum Acidobacteria provide insight into their lifestyles in soils. (2009)
    Ward NL, Challacombe JF, Janssen PH, Henrissat B, Coutinho PM, Wu M, Xie G, Haft DH, Sait M, Badger J, Barabote RD, Bradley B, Brettin TS, Brinkac LM, Bruce D, Creasy T, Daugherty SC, Davidsen TM, Deboy RT, Detter JC, Dodson RJ, Durkin AS, Ganapathy A, Gwinn-Giglio M, Han CS, Khouri H, Kiss H, Kothari SP, Madupu R, Nelson K, Nelson WC, Paulsen I, Penn K, Ren Q, Rosovitz MJ, Selengut JD, Shrivastava S, Sullivan SA, Tapia R, Thompson LS, Watkins KL, Yang Q, Yu C, Zafar N, Zhou L, Kuske CR
    Appl Environ Microbiol 75 2046-2056
  63. Tropheryma whipplei glycosylation in the pathophysiologic profile of Whipple's disease. (2009)
    Bonhomme CJ, Renesto P, Desnues B, Ghigo E, Lepidi H, Fourquet P, Fenollar F, Henrissat B, Mege JL, Raoult D
    J Infect Dis 199 1043-1052
  64. Intrinsic disorder in Viral Proteins Genome-Linked: experimental and predictive analyses. (2009)
    Hebrard E, Bessin Y, Michon T, Longhi S, Uversky VN, Delalande F, Van Dorsselaer A, Romero P, Walter J, Declerk N, Fargette D
    Virol J 6 23
  65. Camelid nanobodies raised against an integral membrane enzyme, nitric oxide reductase. (2009)
    Conrath K, Pereira AS, Martins CE, Timoteo CG, Tavares P, Spinelli S, Kinne J, Flaudrops C, Cambillau C, Muyldermans S, Moura I, Moura JJ, Tegoni M, Desmyter A
    Protein Sci 18 619-28
  66. Nucleocapsid structure and function. (2009)
    Longhi S
    Curr Top Microbiol Immunol 329 103-28
  67. Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases (2009)
    Brulc JM, Antonopoulos DA, Berg Miller ME, Wilsona MK, Yannarell AC, Dinsdaled EA, Edwards RE, Frankh ED, Emersoni JB, Wacklini P, Coutinho PM, Henrissat B, Nelsoni KE, White BA
    Proc Natl Acad Sci U S A 106 1948-1953
  68. Crystal Structure of ORF12 from Lactococcus lactis phage p2 Identifies a Tape Measure Protein Chaperone. (2009)
    Siponen M, Sciara G, Villion M, Spinelli S, Lichiere J, Cambillau C, Moineau S, Campanacci V
    J Bacteriol 191 728-734
  69. A core gut microbiome in obese and lean twins. (2009)
    Turnbaugh PJ, Hamady M, Yatsunenko T, Cantarel BL, Duncan A, Ley RE, Sogin ML, Jones WJ, Roe BA, Affourtit JP, Egholm M, Henrissat B, Heath AC, Knight R, Gordon JI
    Nature 457 480-484
  70. Human Discs Large Is a New Negative Regulator of HIV-1 Infectivity. (2009)
    Perugi F, Muriaux D, Ramirez BC, Chabani S, Decroly E, Darlix JL, Blot V, Pique C
    Mol Biol Cell 20 498-508
  71. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics (2009)
    Cantarel BL, Coutinho PM, Rancurel C, Bernard T, Lombard V, Henrissat B
    Nucleic Acids Res 37 D233-238

2008

  1. Chemical Synthesis and Characterization of J46 Peptide, an Atypical Class IIa Bacteriocin from Lactococcus lactis subsp. cremoris J46 Strain. (2008)
    Lasta S, Fajloun Z, Darbon H, Mansuelle P, Andreotti N, Sabatier JM, Boudabous A, Sampieri F
    J Antibiot 61 89-93
  2. Glycosyltransferases: Structures, Functions and Mechanisms (2008)
    Lairson LL, Henrissat B, Davies GJ, Withers SG
    Annu Rev Biochem 77 521-555
  3. The genome sequence of the model ascomycete fungus Podospora anserina. (2008)
    Espagne E, Lespinet O, Malagnac F, Da Silva C, Jaillon O, Porcel BM, Couloux A, Aury JM, Segurens B, Poulain J, Anthouard V, Grossetete S, Khalili H, Coppin E, Dequard-Chablat M, Picard M, Contamine V, Arnaise S, Bourdais A, Berteaux-Lecellier V, Gautheret D, de Vries RP, Battaglia E, Coutinho PM, Danchin EG, Henrissat B, Khoury RE, Sainsard-Chanet A, Boivin A, Pinan-Lucarre B, Sellem CH, Debuchy R, Wincker P, Weissenbach J, Silar P
    Genome Biol 9 R77
  4. Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 (2008)
    Weiner RM, Larry E Taylor LE, Henrissat B, Hauser L, Land M, Coutinho PM, Rancurel C, Saunders EH , Longmire AG, Zhang H, Bayer EA, Gilbert HJ, Larimer F, Zhulin IB, Ekborg NA, Lamed R, Richardson PM, Borovok I, Hutcheson S
    PLoS Genet 4(5) e1000087
  5. Green fluorescent protein and factorial approach: an effective partnership for screening the soluble expression of recombinant proteins in Escherichia coli. (2008)
    Coutard B, Gagnaire M, Guilhon AA, Berro M, Canaan S, Bignon C
    Protein Expr Purif 61 184-90
  6. Protein production and purification. (2008)
    Graslund S, Nordlund P, Weigelt J, Hallberg BM, Bray J, Gileadi O, Knapp S, Oppermann U, Arrowsmith C, Hui R, Ming J, dhe-Paganon S, Park HW, Savchenko A, Yee A, Edwards A, Vincentelli R, Cambillau C, Kim R, Kim SH, Rao Z, Shi Y, Terwilliger TC, Kim CY, Hung LW, Waldo GS, Peleg Y, Albeck S, Unger T, Dym O, Prilusky J, Sussman JL, Stevens RC, Lesley SA, Wilson IA, Joachimiak A, Collart F, Dementieva I, Donnelly MI, Eschenfeldt WH, Kim Y, Stols L, Wu R, Zhou M, Burley SK, Emtage JS, Sauder JM, Thompson D, Bain K, Luz J, Gheyi T, Zhang F, Atwell S, Almo SC, Bonanno JB, Fiser A, Swaminathan S, Studier FW, Chance MR, Sali A, Acton TB, Xiao R, Zhao L, Ma LC, Hunt JF, Tong L, Cunningham K, Inouye M, Anderson S, Janjua H, Shastry R, Ho CK, Wang D, Wang H, Jiang M, Montelione GT, Stuart DI, Owens RJ, Daenke S, Schutz A, Heinemann U, Yokoyama S, Bussow K, Gunsalus KC
    Nat Methods 5 135-46
  7. The flavivirus polymerase as a target for drug discovery. (2008)
    Malet H, Masse N, Selisko B, Romette JL, Alvarez K, Guillemot JC, Tolou H, Yap TL, Vasudevan S, Lescar J, Canard B
    Antiviral Res 80 23-35
  8. The crystal structure of coxsackievirus B3 RNA-dependent RNA polymerase in complex with its protein primer VPg confirms the existence of a second VPg binding site on Picornaviridae polymerases. (2008)
    Gruez A, Selisko B, Roberts M, Bricogne G, Bussetta C, Jabafi I, Coutard B, De Palma AM, Neyts J, Canard B
    J Virol 82 9577-90
  9. Mapping alpha-helical induced folding within the intrinsically disordered C-terminal domain of the measles virus nucleoprotein by site-directed spin-labeling EPR spectroscopy. (2008)
    Belle V, Rouger S, Costanzo S, Liquiere E, Strancar J, Guigliarelli B, Fournel A, Longhi S
    Proteins 73 973-88
  10. Towards the design of antiviral inhibitors against flaviviruses: The case for the multifunctional NS3 protein from Dengue virus as a target. (2008)
    Lescar J, Luo D, Xu T, Sampath A, Lim SP, Canard B, Vasudevan SG
    Antiviral Res 80 94-101
  11. Biochemical and structural characterization of the intracellular mannanase AaManA of Alicyclobacillus acidocaldarius reveals a novel glycoside hydrolase family belonging to Clan GH-A. (2008)
    Zhang Y, Ju J, Peng H, Gao F, Zhou C, Zeng Y, Xue Y, Li Y, Henrissat B, Gao GF, Ma Y
    J Biol Chem 283 31551-8
  12. Structure of Locusta migratoria protease inhibitor 3 (LMPI-3) in complex with Fusarium oxysporum trypsin. (2008)
    Leone P, Roussel A, Kellenberger C
    Acta Crystallogr D Biol Crystallogr 64 1165-1171
  13. Epileptic and developmental disorders of the speech cortex: ligand/receptor interaction of wild-type and mutant SRPX2 with the plasminogen activator receptor uPAR. (2008)
    Royer-Zemmour B, Ponsole-Lenfant M, Gara H, Roll P, Leveque C, Massacrier A, Ferracci G, Cillario J, Robaglia-Schlupp A, Vincentelli R, Cau P, Szepetowski P
    Hum Mol Genet 17 3617-30
  14. Divergence of catalytic mechanism within a glycosidase family provides insight into evolution of carbohydrate metabolism by human gut flora. (2008)
    Gloster TM, Turkenburg JP, Potts JR, Henrissat B, Davies GJ
    Chem Biol 15 1058-1067
  15. There is a baby in the bath water: AcrB contamination is a major problem in membrane-protein crystallization. (2008)
    Veesler D, Blangy S, Cambillau C, Sciara G
    Acta Crystallogr Sect F Struct Biol Cryst Commun 64 880-5
  16. MeDor: a metaserver for predicting protein disorder. (2008)
    Lieutaud P, Canard B, Longhi S
    BMC Genomics 9 Suppl 2 S25
  17. Glycosyltransferases, glycoside hydrolases: surprise, surprise! (2008)
    Henrissat B, Sulzenbacher G, Bourne Y
    Curr Opin Struct Biol 18 527-533
  18. Acyclic phosphonates : molecular aspects of active site constraints within HIV-1 RT (2008)
    Frangeul A, Busseta C, Deval J, Barral K,Selmi B, Boretto J, Alvarez K, Canard B
    Antivir Ther 13 (1) 115-24
  19. Structure of Human Pancreatic Lipase-Related Protein 2 with the Lid in an Open Conformation. (2008)
    Eydoux C, Spinelli S, Davis TL, Walker JR, Seitova A, Dhe-Paganon S, De Caro A, Cambillau C, Carriere F
    Biochemistry 47(36) 9553-64
  20. The convergence of carbohydrate active gene repertoires in human gut microbes. (2008)
    Lozupone CA, Hamady M, Cantarel BL, Coutinho PM, Henrissat B, Gordon JI, Knight R
    Proc Natl Acad Sci U S A 105(39) 15076-81
  21. Phosphoramidate Dinucleosides as Hepatitis C Virus Polymerase Inhibitors. (2008)
    Zlatev I, Dutartre H, Barvik I, Neyts J, Canard B, Vasseur JJ, Alvarez K, Morvan F
    J Med Chem 51 5745-5757
  22. Secretome analysis of Phanerochaete chrysosporium strain CIRM-BRFM 41 grown on softwood (2008)
    Ravalason H, Jan G, Molle D, Pasco M, Coutinho PM, Lapierre C, Pollet B, Bertaud F, Petit-Conil M, Grisel S, Sigoillot JC, Asther M, Herpoel-Gimbert I
    Appl Microbiol Biotechnol 80(4) 719-733
  23. The thiazolobenzimidazole TBZE-029 inhibits enteroviral replication by targeting a short region immediately downstream motif C in the non-structural protein 2C. (2008)
    De Palma AM, Heggermont W, Lanke K, Coutard B, Bergmann M, Monforte AM, Canard B, De Clercq E, Chimirri A, Purstinger G, Rohayem J, van Kuppeveld F, Neyts J
    J Virol 82 4720-4730
  24. Coronavirus nonstructural protein 16 is a cap-0 binding enzyme possessing (nucleoside-2'O)-methyltransferase activity. (2008)
    Decroly E, Imbert I, Coutard B, Bouvet M, Selisko B, Alvarez K, Gorbalenya AE, Snijder EJ, Canard B
    J Virol 82 8071-8084
  25. Structural Basis of the Honey Bee PBP Pheromone and pH-induced Conformational Change. (2008)
    Pesenti ME, Spinelli S, Bezirard V, Briand L, Pernollet JC, Tegoni M, Cambillau C
    J Mol Biol 380 158-169
  26. FUNCTIONAL CHARACTERIZATION OF THE CLEAVAGE SPECIFICITY OF THE SAPOVIRUS CHYMOTRYPSIN-LIKE PROTEASE. (2008)
    Robel I, Gebhardt J, Mesters JR, Gorbalenya A, Coutard B, Canard B, Hilgenfeld R, Rohayem J
    J Virol 82 8085-8093
  27. Insights into plant cell-wall degradation from the genome sequence of the soil bacterium Cellvibrio japonicus . (2008)
    Deboy RT, Mongodin EF, Fouts DE, Tailford LE, Khouri H, Emerson JB, Mohamoud Y, Watkins K, Henrissat B, Gilbert HJ, Nelson KE
    J Bacteriol 190 5455-5463
  28. Genome sequence of the metazoan plant-specific nematode Meloidogyne incognita (2008)
    Abad P, Gouzy J, Aury JM, Castagnone-Sereno P, Danchin EGJ, Deleury E, Perfus-Barbeoch L, Anthouard V, Artiguenave F, Blok VC, Caillaud MC, Coutinho PM, Dasilva C, De Luca F, Deau F, Esquibet M, Flutre T, Goldstone JV, Hamamouch N, Hewezi T, Jaillon O, Jubin C, Leonetti P, Magliano M, Maier TR, Markov GV, McVeigh P, Pesole G, Poulain J, Robinson-Rechavi M, Sallet E, Segurens B, Steinbach D, Tytgat T, Ugarte E, van Ghelder C, Veronico P, Baum TJ, Blaxter M, Bleve-Zacheo T, Davis EL, Ewbank JJ, Favery B, Grenier E, Henrissat B, Jones JT, Laudet V, Maule AG, Quesneville H, Rosso MN, Schiex T, Smant G, Weissenbach J, Wincker P
    Nat Biotechnol 26 909-915
  29. Structural basis for natural lactonase and promiscuous phosphotriesterase activities (2008)
    Elias M, Dupuy J, Merone L, Mandrich L, Porzio E, Moniot S, Rochu D, Lecomte C, Rossi M, Masson P, Manco G, Chabriere E
    J Mol Biol 379 1017-28
  30. Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina) (2008)
    Martinez D, Berka RM, Henrissat B, Saloheimo M, Arvas M, Baker SE, Chapman J, Chertkov O, Coutinho PM, Cullen D, Danchin EGJ, Grigoriev IV, Harris P, Jackson M, Kubicek CP, Han CS, Ho I, Larrondo LF, Lopez de Leon A, Magnuson JK, Merino S, Misra M, Nelson B, Putnam N, Robbertse B, Salamov AA, Schmoll M, Terry A, Thaye N, Westerholm-Parvinen A, Schoch CL, Yao J, Barbote R, Nelson MA, Detter C, Bruce D, Kuske CR, Xie G, Richardson P, Rokhsar DS, Lucas SM, Rubin EM, Dunn-Coleman N, Ward M, Brettin TS
    Nat Biotechnol 26 553-560
  31. Tandem use of X-ray crystallography and mass spectrometry to obtain ab initio the complete and exact amino acids sequence of HPBP, a human 38kDa apolipoprotein (2008)
    Diemer H, Elias M, Renault F, Rochu D, Contreras-Martel C, Schaeffer C, Van Dorsselaer A, Chabriere E
    Proteins 71 1708-1720
  32. FOLy: an integrated database for the classification and functional annotation of fungal oxidoreductases potentially involved in the degradation of lignin and related aromatic compounds (2008)
    Levasseur A, Piumi F, Coutinho PM, Rancurel C, Asther M, Delattre M, Henrissat B, Pontarotti P, Asther M, Record E
    Fungal Genet Biol 45 638-45
  33. International research networks in viral structural proteomics: Again, lessons from SARS. (2008)
    Canard B, Joseph JS, Kuhn P
    Antiviral Res 78 47-50
  34. The VIZIER project: Preparedness against pathogenic RNA viruses. (2008)
    Coutard B, Gorbalenya AE, Snijder EJ, Leontovich AM, Poupon A, De Lamballerie X, Charrel R, Gould EA, Gunther S, Norder H, Klempa B, Bourhy H, Rohayem J, L'hermite E, Nordlund P, Stuart DI, Owens RJ, Grimes JM, Tucker PA, Bolognesi M, Mattevi A, Coll M, Jones TA, Aqvist J, Unge T, Hilgenfeld R, Bricogne G, Neyts J, La Colla P, Puerstinger G, Gonzalez JP, Leroy E, Cambillau C, Romette JL, Canard B
    Antiviral Res 78 37-46
  35. Identification of a GH110 subfamily of alpha1,3-galactosidases: Novel enzymes for removal of the alpha3gal xenotransplantation antigen. (2008)
    Liu QP, Yuan H, Bennett EP, Levery SB, Nudelman E, Spence J, Pietz G, Saunders K, White T, Olsson ML, Henrissat B, Sulzenbacher G, Clausen H.
    J Biol Chem 283 8545-54
  36. Differential Substrate Specificity and Kinetic Behavior in Escherichia coli YfdW and Oxalobacter formigenes Formyl-CoA Transferase. (2008)
    Toyota CG, Berthold CL, Gruez A, Jonsson S, Lindqvist Y, Cambillau C, Richards NG.
    J Bacteriol 190 2556-64
  37. The SARS-Coronavirus PLnc domain of nsp3 as a replication/transcription scaffolding protein. (2008)
    Imbert I, Snijder EJ, Dimitrova M, Guillemot JC, Lecine P, Canard B
    Virus Res 133 136-48
  38. Deswapping bovine odorant binding protein. (2008)
    Ramoni R, Spinelli S, Grolli S, Conti V, Merli E, Cambillau C, Tegoni M
    Biochim Biophys Acta 1784 651-7
  39. The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis (2008)
    Martin F, Aerts A, Ahren D, Brun A, Danchin EGJ, Duchaussoy F, Gibon J, Kohler A, Lindquist E, Pereda V, Salamov A, Shapiro HJ, Wuyts J, Blaudez D, Buee M, Brokstein P, Canback B, Cohen D, Courty PE, Coutinho PM, Delaruelle C, Detter JC, Deveau A, DiFazio S, Duplessis S, Fraissinet-Tachet L, Lucic E, Frey-Klett P, Fourrey C, Feussner I, Gay G, Grimwood J, Hoegger PJ, Jain P, Kilaru S, Labbe J, Lin YC, Legue V, Le Tacon F, Marmeisse R, Melayah D, Montanini B, Muratet M, Nehls U, Niculita-Hirzel H, Oudot-Le Secq MP, Peter M, Quesneville H, Rajashekar B, Reich M, Rouhier N, Schmutz J, Yin T, Chalot M, Henrissat B, Kues U, Lucas S, Van de Peer Y, Podila GK, Polle A, Pukkila PJ, Richardson PM, Rouze P, Sanders IR, Stajich JE, Tunlid A, Tuskan G, Grigoriev IV
    Nature 452 88-92
  40. Structure and biochemical analysis of Kokobera virus helicase. (2008)
    Speroni S, De Colibus L, Mastrangelo E, Gould E, Coutard B, Forrester NL, Blanc S, Canard B, Mattevi A
    Proteins 70 1120-3
  41. A topological model of the baseplate of lactococcal phage tuc2009. (2008)
    Sciara G, Blangy S, Siponen M, Mc Grath S, van Sinderen D, Tegoni M, Cambillau C, Campanacci V
    J Biol Chem 283 2716-23
  42. The translation of recombinant proteins in E. coli can be improved by in silico generating and screening random libraries of a 70/+96 mRNA region with respect to the translation initiation codon. (2008)
    Care S, Bignon C, Pelissier MC, Blanc E, Canard B, Coutard B
    Nucleic Acids Res 36 e6
  43. Chemical synthesis and 1H-NMR 3D structure determination of AgTx2-MTX chimera, a new potential blocker for Kv1.2 channel, derived from MTX and AgTx2 scorpion toxins. (2008)
    Pimentel C, M'barek S, Visan V, Grissmer S, Sampieri F, Sabatier JM, Darbon H, Fajloun Z
    Protein Sci 17 107-18
  44. Structures of mutants of cellulase CEL48F of Clostridium cellulolyticum in complex with long hemithio-cellooligosaccharides give rise to a new view of the substrate pathway during processive action. (2008)
    Parsiegla G, Reverbel C, Tardif C, Driguez H and Haser R
    J Mol Biol 375 499-510
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