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Publications

Monday 17 October 2011

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Publications of the six last years

2013

Genome of the red alga Porphyridium purpureum. (2013)

Bhattacharya D, Price DC, Xin Chan C, Qiu H, Rose N, Ball S, Weber AP, Cecilia Arias M, Henrissat B, Coutinho PM, Krishnan A, Zauner S, Morath S, Hilliou F, Egizi A, Perrineau MM, Yoon HS

Nat Commun 4 1941
The abundance and variety of carbohydrate-active enzymes in the human gut microbiota. (2013)

el Kaoutari A, Armougom F, Gordon JI, Raoult D, Henrissat B

Nat Rev Microbiol 11 497-504
Mining for hemicellulases in the fungus-growing termite Pseudacanthotermes militaris using functional metagenomics. (2013)

Bastien G, Arnal G, Bozonnet S, Laguerre S, Ferreira F, Faure R, Henrissat B, Lefevre F, Robe P, Bouchez O, Noirot C, Dumon C, O Donohue M

Biotechnol Biofuels 6 78
Structural and biochemical analyses of glycoside hydrolase families 5 and 26 beta-(1,4)-mannanases from Podospora anserina reveal differences upon manno-oligosaccharides catalysis. (2013)

Couturier M, Roussel A, Rosengren A, Leone P, Stalbrand H, Berrin JG

J Biol Chem 288 14624-35
Ester prodrugs of acyclic nucleoside thiophosphonates compared to phosphonates: Synthesis, antiviral activity and decomposition study. (2013)

Roux L, Priet S, Payrot N, Weck C, Fournier M, Zoulim F, Balzarini J, Canard B, Alvarez K

Eur J Med Chem 63C 869-881
Solution conformational features and interfacial properties of an intrinsically disordered peptide coupled to alkyl chains: a new class of peptide amphiphiles. (2013)

Accardo A, Leone M, Tesauro D, Aufiero R, Benarouche A, Cavalier JF, Longhi S, Carriere F, Rossi F

Mol Biosyst 9 1401-10
3',5'Di-O-trityluridine inhibits in vitro flavivirus replication. (2013)

De Burghgraeve T, Selisko B, Kaptein S, Chatelain G, Leyssen P, Debing Y, Jacobs M, Van Aerschot A, Canard B, Neyts J

Antiviral Res 98(2) 242-7
Structure and Functional analysis of the host-recognition device of Lactococcal Phage Tuc2009. (2013)

Collins B, Bebeacua C, Mahony J, Blangy S, Douillard FP, Veesler D, Cambillau C, van Sinderen D

J Virol in press
X-ray structure of a superinfection exclusion lipoprotein from phage TP-J34 and identification of the tape measure protein as its target. (2013)

Bebeacua C, Lorenzo Fajardo JC, Blangy S, Spinelli S, Bollmann S, Neve H, Cambillau C, Heller KJ

Mol Microbiol in press
The first structure of a mycobacteriophage, Araucaria. (2013)

Sassi M, Bebeacua C, Drancourt M, Cambillau C

J Virol in press
Characterization of salt-adapted secreted lignocellulolytic enzymes from the mangrove fungus Pestalotiopsis sp. (2013)

Arfi Y, Chevret D, Henrissat B, Berrin JG, Levasseur A, Record E

Nat Commun 4 1810
Exploring family 6 glycoside hydrolases from Podospora anserina : insights into exo- and endo-glucanase activities. (2013)

Poidevin L, Feliu J, Doan A, Berrin JG, Bey M, Coutinho PM, Henrissat B, Record E, Heiss-Blanquet S

Appl Environ Microbiol
Genomic Evaluation of Thermoanaerobacter spp. for the Construction of Designer Co-Cultures to Improve Lignocellulosic Biofuel Production. (2013)

Verbeke TJ, Zhang X, Henrissat B, Spicer V, Rydzak T, Krokhin OV, Fristensky B, Levin DB, Sparling R

PLoS One 8 e59362
Viral infection modulation and neutralization by camelid nanobodies. (2013)

Desmyter A, Farenc C, Mahony J, Spinelli S, Bebeacua C, Blangy S, Veesler D, van Sinderen D, Cambillau C

Proc Natl Acad Sci U S A 110 E1371-9
The DNA binding mechanism of a SSB protein from Lactococcus lactis siphophage p2. (2013)

Scaltriti E, Polverini E, Grolli S, Eufemi E, Moineau S, Cambillau C, Ramoni R

Biochim Biophys Acta 1834 1070-76
Nuclear localization of dengue virus nonstructural protein 5 does not strictly correlate with efficient viral RNA replication and inhibition of type I interferon signaling. (2013)

Kumar A, Buhler S, Selisko B, Davidson A, Mulder K, Canard B, Miller S, Bartenschlager R

J Virol 87 4545-57
Selective Serotonin Reuptake Inhibitor Fluoxetine Inhibits Replication of Human Enteroviruses B and D by Targeting Viral Protein 2C. (2013)

Ulferts R, van der Linden L, Thibaut HJ, Lanke KH, Leyssen P, Coutard B, De Palma AM, Canard B, Neyts J, van Kuppeveld FJ

Antimicrob Agents Chemother 57 1952-6
The structure of a Streptomyces avermitilis alpha-L-rhamnosidase reveals a novel carbohydrate-binding module CBM67 within the six-domain arrangement. (2013)

Fujimoto Z, Jackson A, Michikawa M, Maehara T, Momma M, Henrissat B, Gilbert HJ, Kaneko S

J Biol Chem 288 12376-85
Expansion of the enzymatic repertoire of the CAZy database to integrate auxiliary redox enzymes. (2013)

Levasseur A, Drula E, Lombard V, Coutinho PM, Henrissat B

Biotechnol Biofuels 6 41
Comparative Genomics of a Plant-Pathogenic Fungus, Pyrenophora tritici-repentis , Reveals Transduplication and the Impact of Repeat Elements on Pathogenicity and Population Divergence. (2013)

Manning VA, Pandelova I, Dhillon B, Wilhelm LJ, Goodwin SB, Berlin AM, Figueroa M, Freitag M, Hane JK, Henrissat B, Holman WH, Kodira CD, Martin J, Oliver RP, Robbertse B, Schackwitz W, Schwartz DC, Spatafora JW, Turgeon BG, Yandava C, Young S, Zhou S, Zeng Q, Grigoriev IV, Ma LJ, Ciuffetti LM

G3 (Bethesda) 3 41-63
Structure and activity of AbiQ, a lactococcal endoribonuclease belonging to the type-III toxin-antitoxin system. (2013)

Samson JE, Spinelli S, Cambillau C, Moineau S

Mol Microbiol 87 756-68
Cello-Oligosaccharide Oxidation Reveals Differences between Two Lytic Polysaccharide Monooxygenases (Family GH61) from Podospora anserina (2013)

Bey M, Zhou S, Poidevin L, Henrissat B, Coutinho PM, Berrin JG, Sigoillot JC

Appl Environ Microbiol 79 488-96
Assessing induced folding within the intrinsically disordered C-terminal domain of the Henipavirus nucleoproteins by site-directed spin labeling EPR spectroscopy. (2013)

Martinho M, Habchi J, El Habre Z, Nesme L, Guigliarelli B, Belle V, Longhi S

J Biomol Struct Dyn 31 453-71
Structure and function of AvtR, a novel transcriptional regulator from a hyperthermophilic archaeal lipothrixvirus. (2013)

Peixeiro N, Keller J, Collinet B, Leulliot N, Campanacci V, Cortez D, Cambillau C, Nitta KR, Vincentelli R, Forterre P, Prangishvili D, Sezonov G, van Tilbeurgh H

J Virol 87 124-36
Visualizing a Complete Siphoviridae by Single-particle Electron Microscopy: The Structure of Lactococcal Phage TP901-1. (2013)

Bebeacua C, Lai L, Vegge CS, Brondsted L, van Heel M, Veesler D, Cambillau C

J Virol 87 1061-8
ESTHER, the database of the alpha/beta-hydrolase fold superfamily of proteins: tools to explore diversity of functions. (2013)

Lenfant N, Hotelier T, Velluet E, Bourne Y, Marchot P, Chatonnet A

Nucleic Acids Res 41(D1) D423-9
Proteins with an alpha/beta hydrolase fold: Relationships between subfamilies in an ever-growing superfamily. (2013)

Lenfant N, Hotelier T, Bourne Y, Marchot P, Chatonnet A

Chem Biol Interact 25 266/268

2012

Tissue- and ligand-specific sensing of gram-negative infection in drosophila by PGRP-LC isoforms and PGRP-LE. (2012)

Neyen C, Poidevin M, Roussel A, Lemaitre B

J Immunol 189 1886-97
Structure of human DNase I bound to magnesium and phosphate ions points to a catalytic mechanism common to members of the DNase I-like superfamily. (2012)

Parsiegla G, Noguere C, Santell L, Lazarus RA, Bourne Y

Biochemistry 51 10250-8
How nature can exploit nonspecific catalytic and carbohydrate binding modules to create enzymatic specificity. (2012)

Cuskin F, Flint JE, Gloster TM, Morland C, Basle A, Henrissat B, Coutinho PM, Strazzulli A, Solovyova AS, Davies GJ, Gilbert HJ

Proc Natl Acad Sci U S A 109 20889-94
Peptidoglycan: a post-genomic analysis. (2012)

Cayrou C, Henrissat B, Gouret P, Pontarotti P, Drancourt M

BMC Microbiol 12 294
Diverse lifestyles and strategies of plant pathogenesis encoded in the genomes of eighteen dothideomycetes fungi. (2012)

Ohm RA, Feau N, Henrissat B, Schoch CL, Horwitz BA, Barry KW, Condon BJ, Copeland AC, Dhillon B, Glaser F, Hesse CN, Kosti I, Labutti K, Lindquist EA, Lucas S, Salamov AA, Bradshaw RE, Ciuffetti L, Hamelin RC, Kema GH, Lawrence C, Scott JA, Spatafora JW, Turgeon BG, de Wit PJ, Zhong S, Goodwin SB, Grigoriev IV

PLoS Pathog 8 e1003037
Structural characterization and oligomerization of the TssL protein, a component shared by the bacterial Type VI and Type IVb secretion systems. (2012)

Durand E, Zoued A, Spinelli S, Watson PJ, Aschtgen MS, Journet L, Cambillau C, Cascales E

J Biol Chem 287 14157-68
Biflavonoids of Dacrydium balansae with Potent Inhibitory Activity on Dengue 2 NS5 Polymerase. (2012)

Coulerie P, Eydoux C, Hnawia E, Stuhl L, Maciuk A, Lebouvier N, Canard B, Figadere B, Guillemot JC, Nour M

Planta Med 78 672-7
Chemical constituents of Anacolosa pervilleana and their antiviral activities. (2012)

Bourjot M, Leyssen P, Eydoux C, Guillemot JC, Canard B, Rasoanaivo P, Gueritte F, Litaudon M

Fitoterapia 83 1076-80
RNA 3'-end mismatch excision by the severe acute respiratory syndrome coronavirus nonstructural protein nsp10 nsp14 exoribonuclease complex. (2012)

Bouvet M, Imbert I, Subissi L, Gluais L, Canard B, Decroly E

Proc Natl Acad Sci U S A 109 9372-7
Exploring natural fungal biodiversity from tropical and temperate forests to improve biomass conversion. (2012)

Berrin JG, Navarro D, Couturier M, Olive C, Grisel S, Haon M, Taussac S, Lechat C, Courtecuisse R, Favel A, Coutinho PM, Lesage-Meessen L

Appl Environ Microbiol 78 6483-90
Effects of Dietary Fiber on the Feline Gastrointestinal Metagenome. (2012)

Barry KA, Middelbos IS, Vester Boler BM, Dowd SE, Suchodolski JS, Henrissat B, Coutinho PM, White BA, Fahey GC Jr, Swanson KS

J Proteome Res 11 5924-5933
Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs. (2012)

Curtis BA, Tanifuji G, Burki F, Gruber A, Irimia M, Maruyama S, Arias MC, Ball SG, Gile GH, Hirakawa Y, Hopkins JF, Kuo A, Rensing SA, Schmutz J, Symeonidi A, Elias M, Eveleigh RJ, Herman EK, Klute MJ, Nakayama T, Obornik M, Reyes-Prieto A, Armbrust EV, Aves SJ, Beiko RG, Coutinho P, Dacks JB, Durnford DG, Fast NM, Green BR, Grisdale CJ, Hempel F, Henrissat B, Hoppner MP, Ishida KI, Kim E, Koreny L, Kroth PG, Liu Y, Malik SB, Maier UG, McRose D, Mock T, Neilson JA, Onodera NT, Poole AM, Pritham EJ, Richards TA, Rocap G, Roy SW, Sarai C, Schaack S, Shirato S, Slamovits CH, Spencer DF, Suzuki S, Worden AZ, Zauner S, Barry K, Bell C, Bharti AK, Crow JA, Grimwood J, Kramer R, Lindquist E, Lucas S, Salamov A, McFadden GI, Lane CE, Keeling PJ, Gray MW, Grigoriev IV, Archibald JM

Nature 492 59-65
Monitoring structural transitions in IDPs by site-directed spin labeling EPR spectroscopy. (2012)

Habchi J, Martinho M, Gruet A, Guigliarelli B, Longhi S, Belle V

Methods Mol Biol 895 361-86
Monitoring structural transitions in IDPs by vibrational spectroscopy of cyanylated cysteine. (2012)

Yang H, Habchi J, Longhi S, Londergan CH

Methods Mol Biol 895 245-70
Involvement of the major capsid protein and two early-expressed phage genes in the activity of the lactococcal abortive infection mechanism AbiT. (2012)

Labrie SJ, Tremblay DM, Moisan M, Villion M, Magadan AH, Campanacci V, Cambillau C, Moineau S

Appl Environ Microbiol 78 6890-9
The viral RNA capping machinery as a target for antiviral drugs. (2012)

Ferron F, Decroly E, Selisko B, Canard B

Antiviral Res 96 21-31
Interaction between the C-terminal domains of measles virus nucleoprotein and phosphoprotein: a tight complex implying one binding site. (2012)

Blocquel D, Habchi J, Costanzo S, Doizy A, Oglesbee M, Longhi S

Protein Sci 21 1577-85
Antiviral chlorinated daphnane diterpenoid orthoesters from the bark and wood of Trigonostemon cherrieri. (2012)

Allard PM, Leyssen P, Martin MT, Bourjot M, Dumontet V, Eydoux C, Guillemot JC, Canard B, Poullain C, Gueritte F, Litaudon M

Phytochemistry 84 160-8
Molecular basis for nucleotide conservation at the ends of the dengue virus genome. (2012)

Selisko B, Potisopon S, Agred R, Priet S, Varlet I, Thillier Y, Sallamand C, Debart F, Vasseur JJ, Canard B

PLoS Pathog 8 e1002912
Crystal structure of greglin, a novel non-classical Kazal inhibitor, in complex with subtilisin. (2012)

Derache C, Epinette C, Roussel A, Gabant G, Cadene M, Korkmaz B, Gauthier F, Kellenberger C

FEBS J 279 4466-78
The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry. (2012)

de Wit PJ, van der Burgt A, Okmen B, Stergiopoulos I, Abd-Elsalam KA, Aerts AL, Bahkali AH, Beenen HG, Chettri P, Cox MP, Datema E, de Vries RP, Dhillon B, Ganley AR, Griffiths SA, Guo Y, Hamelin RC, Henrissat B, Kabir MS, Jashni MK, Kema G, Klaubauf S, Lapidus A, Levasseur A, Lindquist E, Mehrabi R, Ohm RA, Owen TJ, Salamov A, Schwelm A, Schijlen E, Sun H, van den Burg HA, van Ham RC, Zhang S, Goodwin SB, Grigoriev IV, Collemare J, Bradshaw RE

PLoS Genet 8 e1003088
Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease. (2012)

Erickson AR, Cantarel BL, Lamendella R, Darzi Y, Mongodin EF, Pan C, Shah M, Halfvarson J, Tysk C, Henrissat B, Raes J, Verberkmoes NC, Fraser CM, Hettich RL, Jansson JK

PLoS One 7 e49138
Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche. (2012)

Morin E, Kohler A, Baker AR, Foulongne-Oriol M, Lombard V, Nagy LG, Ohm RA, Patyshakuliyeva A, Brun A, Aerts AL, Bailey AM, Billette C, Coutinho PM, Deakin G, Doddapaneni H, Floudas D, Grimwood J, Hilden K, Kues U, Labutti KM, Lapidus A, Lindquist EA, Lucas SM, Murat C, Riley RW, Salamov AA, Schmutz J, Subramanian V, Wosten HA, Xu J, Eastwood DC, Foster GD, Sonnenberg AS, Cullen D, de Vries RP, Lundell T, Hibbett DS, Henrissat B, Burton KS, Kerrigan RW, Challen MP, Grigoriev IV, Martin F

Proc Natl Acad Sci U S A 109 17501-17506
Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism. (2012)

Veesler D, Spinelli S, Mahony J, Lichiere J, Blangy S, Bricogne G, Legrand P, Ortiz-Lombardia M, Campanacci V, van Sinderen D, Cambillau C

Proc Natl Acad Sci U S A 109 8954-8958
Crystal Structure of ATV(ORF273), a New Fold for a Thermo- and Acido-Stable Protein from the Acidianus Two-Tailed Virus. (2012)

Felisberto-Rodrigues C, Blangy S, Goulet A, Vestergaard G, Cambillau C, Garrett RA, Ortiz-Lombardia M

PLoS One 7 e45847
Crystal Structure of the VgrG1 Actin Cross-linking Domain of the Vibrio cholerae Type VI Secretion System. (2012)

Durand E, Derrez E, Audoly G, Spinelli S, Ortiz-Lombardia M, Raoult D, Cascales E, Cambillau C

J Biol Chem 287 38190-9
A family GH51 α-L-arabinofuranosidase from Pleurotus ostreatus: identification, recombinant expression and characterization. (2012)

Amore A, Amoresano A, Birolo L, Henrissat B, Leo G, Palmese A, Faraco V

Appl Microbiol Biotechnol 94 995-1006
Transcriptome analysis of Stagonospora nodorum: gene models, effectors, metabolism and pantothenate dispensability. (2012)

Ipcho SV, Hane JK, Antoni EA, Ahren D, Henrissat B, Friesen TL, Solomon PS, Oliver RP

Mol Plant Pathol 13 531-545
Genome sequence of the model medicinal mushroom Ganoderma lucidum. (2012)

Chen S, Xu J, Liu C, Zhu Y, Nelson DR, Zhou S, Li C, Wang L, Guo X, Sun Y, Luo H, Li Y, Song J, Henrissat B, Levasseur A, Qian J, Li J, Luo X, Shi L, He L, Xiang L, Xu X, Niu Y, Li Q, Han MV, Yan H, Zhang J, Chen H, Lv A, Wang Z, Liu M, Schwartz DC, Sun C

Nature Commun 3 913
Genome-wide analysis of Acetivibrio cellulolyticus provides a blueprint of an elaborate cellulosome system. (2012)

Dassa B, Borovok I, Lamed R, Henrissat B, Coutinho P, Hemme CL, Huang Y, Zhou J, Bayer EA

BMC Genomics 13 210
Bifidobacterium asteroides PRL2011 Genome Analysis Reveals Clues for Colonization of the Insect Gut. (2012)

Bottacini F, Milani C, Turroni F, Sanchez B, Foroni E, Duranti S, Serafini F, Viappiani A, Strati F, Ferrarini A, Delledonne M, Henrissat B, Coutinho P, Fitzgerald GF, Margolles A, van Sinderen D, Ventura M

PLoS One 7 e44229
Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize. (2012)

Suzuki H, Macdonald J, Syed K, Salamov A, Hori C, Aerts A, Henrissat B, Wiebenga A, Vankuyk PA, Barry K, Lindquist E, Labutti K, Lapidus A, Lucas S, Coutinho P, Gong Y, Samejima M, Mahadevan R, Abou-Zaid M, de Vries RP, Igarashi K, Yadav JS, Grigoriev IV, Master ER

BMC Genomics 13 444
Eukaryote to gut bacteria transfer of a glycoside hydrolase gene essential for starch breakdown in plants. (2012)

Arias MC, Danchin EG, Coutinho P, Henrissat B, Ball S

Mob Genet Elements 2 81-87
Functional Analysis of Family GH36 α-Galactosidases from Ruminococcus gnavus E1: Insights into the Metabolism of a Plant Oligosaccharide by a Human Gut Symbiont. (2012)

Cervera-Tison M, Tailford LE, Fuell C, Bruel L, Sulzenbacher G, Henrissat B, Berrin JG, Fons M, Giardina T, Juge N

Appl Environ Microbiol 78 7720-7732
Complex carbohydrate utilization by the healthy human microbiome. (2012)

Cantarel BL, Lombard V, Henrissat B

PLoS One 7 e28742
Metabolic reconstruction for metagenomic data and its application to the human microbiome. (2012)

Abubucker S, Segata N, Goll J, Schubert AM, Izard J, Cantarel BL, Rodriguez-Mueller B, Zucker J, Thiagarajan M, Henrissat B, White O, Kelley ST, Methe B, Schloss PD, Gevers D, Mitreva M, Huttenhower C

PLoS Comput Biol 8 e1002358
Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses. (2012)

OConnell RJ, Thon MR, Hacquard S, Amyotte SG, Kleemann J, Torres MF, Damm U, Buiate EA, Epstein L, Alkan N, Altmuller J, Alvarado-Balderrama L, Bauser CA, Becker C, Birren BW, Chen Z, Choi J, Crouch JA, Duvick JP, Farman MA, Gan P, Heiman D, Henrissat B, Howard RJ, Kabbage M, Koch C, Kracher B, Kubo Y, Law AD, Lebrun MH, Lee YH, Miyara I, Moore N, Neumann U, Nordstrom K, Panaccione DG, Panstruga R, Place M, Proctor RH, Prusky D, Rech G, Reinhardt R, Rollins JA, Rounsley S, Schardl CL, Schwartz DC, Shenoy N, Shirasu K, Sikhakolli UR, Stuber K, Sukno SA, Sweigard JA, Takano Y, Takahara H, Trail F, van der Does HC, Voll LM, Will I, Young S, Zeng Q, Zhang J, Zhou S, Dickman MB, Schulze-Lefert P, Ver Loren van Themaat E, Ma LJ, Vaillancourt LJ

Nature Genet 44 1060-1065
Evolution, substrate specificity and subfamily classification of glycoside hydrolase family 5 (GH5). (2012)

Aspeborg H, Coutinho PM, Wang Y, Brumer H 3rd, Henrissat B

BMC Evol Biol 12 186
Degradation of different pectins by fungi: correlations and contrasts between the pectinolytic enzyme sets identified in genomes and the growth on pectins of different origin. (2012)

Benoit I, Coutinho PM, Schols HA, Gerlach JP, Henrissat B, de Vries RP

BMC Genomics 13 321
The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. (2012)

Floudas D, Binder M, Riley R, Barry K, Blanchette RA, Henrissat B, Martinez AT, Otillar R, Spatafora JW, Yadav JS, Aerts A, Benoit I, Boyd A, Carlson A, Copeland A, Coutinho PM, de Vries RP, Ferreira P, Findley K, Foster B, Gaskell J, Glotzer D, Gorecki P, Heitman J, Hesse C, Hori C, Igarashi K, Jurgens JA, Kallen N, Kersten P, Kohler A, Kues U, Kumar TK, Kuo A, LaButti K, Larrondo LF, Lindquist E, Ling A, Lombard V, Lucas S, Lundell T, Martin R, McLaughlin DJ, Morgenstern I, Morin E, Murat C, Nagy LG, Nolan M, Ohm RA, Patyshakuliyeva A, Rokas A, Ruiz-Duenas FJ, Sabat G, Salamov A, Samejima M, Schmutz J, Slot JC, St John F, Stenlid J, Sun H, Sun S, Syed K, Tsang A, Wiebenga A, Young D, Pisabarro A, Eastwood DC, Martin F, Cullen D, Grigoriev IV, Hibbett DS

Science 336 1715-9
Crystal structure of the DNA-bound VapBC2 antitoxin/toxin pair from Rickettsia felis. (2012)

Mate MJ, Vincentelli R, Foos N, Raoult D, Cambillau C, Ortiz-Lombardia M

Nucleic Acids Res 40 3245-58
One-step generation of error-prone PCR libraries using Gateway technology. (2012)

Gruet A, Longhi S, Bignon C

Microb Cell Fact 11 14
Plasticity in structural and functional interactions between the phosphoprotein and nucleoprotein of measles virus (2012)

Shu Y, Habchi J, Costanzo S, Padilla A, Brunel J, Gerlier D, Oglesbee M and Longhi S

J Biol Chem 287 11951-67
Structural insights into antibody sequestering and neutralizing of Na+-channel alpha-type modulator from Old-World scorpion venom. (2012)

Fabrichny IP, Mondielli G, Conrod S, Martin-Eauclaire MF, Bourne Y, Marchot P

J Biol Chem 287 14136-48
[Capping strategies in RNA viruses.] (2012)

Bouvet M, Ferron F, Imbert I, Gluais L, Selisko B, Coutard B, Canard B, Decroly E

Med Sci (Paris) 28 423-429
Flacourtosides A-F, Phenolic Glycosides Isolated from Flacourtia ramontchi. (2012)

Bourjot M, Leyssen P, Eydoux C, Guillemot JC, Canard B, Rasoanaivo P, Gueritte F, Litaudon M

J Nat Prod 75 752-8
Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen. (2012)

Olson A, Aerts A, Asiegbu F, Belbahri L, Bouzid O, Broberg A, Canback B, Coutinho PM, Cullen D, Dalman K, Deflorio G, van Diepen LT, Dunand C, Duplessis S, Durling M, Gonthier P, Grimwood J, Fossdal CG, Hansson D, Henrissat B, Hietala A, Himmelstrand K, Hoffmeister D, Hogberg N, James TY, Karlsson M, Kohler A, Kues U, Lee YH, Lin YC, Lind M, Lindquist E, Lombard V, Lucas S, Lunden K, Morin E, Murat C, Park J, Raffaello T, Rouze P, Salamov A, Schmutz J, Solheim H, Stahlberg J, Velez H, de Vries RP, Wiebenga A, Woodward S, Yakovlev I, Garbelotto M, Martin F, Grigoriev IV, Stenlid J

New Phytol 194 1001-1013
Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis. (2012)

Fernandez-Fueyo E, Ruiz-Duenas FJ, Ferreira P, Floudas D, Hibbett DS, Canessa P, Larrondo LF, James TY, Seelenfreund D, Lobos S, Polanco R, Tello M, Honda Y, Watanabe T, Watanabe T, San RJ, Kubicek CP, Schmoll M, Gaskell J, Hammel KE, St John FJ, Vanden Wymelenberg A, Sabat G, Splinter Bondurant S, Syed K, Yadav JS, Doddapaneni H, Subramanian V, Lavin JL, Oguiza JA, Perez G, Pisabarro AG, Ramirez L, Santoyo F, Master E, Coutinho PM, Henrissat B, Lombard V, Magnuson JK, Kues U, Hori C, Igarashi K, Samejima M, Held BW, Barry KW, Labutti KM, Lapidus A, Lindquist EA, Lucas SM, Riley R, Salamov AA, Hoffmeister D, Schwenk D, Hadar Y, Yarden O, de Vries RP, Wiebenga A, Stenlid J, Eastwood D, Grigoriev IV, Berka RM, Blanchette RA, Kersten P, Martinez AT, Vicuna R, Cullen D

Proc Natl Acad Sci U S A 109 5458-5463
Synthesis of 5' cap-0 and cap-1 RNAs using solid-phase chemistry coupled with enzymatic methylation by human (guanine-N7)-methyl transferase. (2012)

Thillier Y, Decroly E, Morvan F, Canard B, Vasseur JJ, Debart F

RNA 18 856-68
Crystal Structure of Diedel, a Marker of the Immune Response of Drosophila melanogaster. (2012)

Coste F, Kemp C, Bobezeau V, Hetru C, Kellenberger C, Imler JL, Roussel A

PLoS One 7 e33416
Carbohydrate-active enzymes revealed in Coptotermes formosanus (Isoptera: Rhinotermitidae) transcriptome. (2012)

Zhang D, Lax AR, Henrissat B, Coutinho P, Katiya N, Nierman WC, Fedorova N

Insect Mol Biol 21 235-245
Single pH buffer refolding screen for protein from inclusion bodies. (2012)

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Monalysin, a Novel ss-Pore-Forming Toxin from the Drosophila Pathogen Pseudomonas entomophila, Contributes to Host Intestinal Damage and Lethality. (2011)

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The Cyst-Dividing Bacterium Ramlibacter tataouinensis TTB310 Genome Reveals a Well-Stocked Toolbox for Adaptation to a Desert Environment. (2011)

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Expanding the molecular toolbox for Lactococcus lactis: construction of an inducible thioredoxin gene fusion expression system. (2011)

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Manzo N, D'Apuzzo E, Coutinho PM, Cutting SM, Henrissat B, Ricca E

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Genomic Analysis of the Necrotrophic Fungal Pathogens Sclerotinia sclerotiorum and Botrytis cinerea . (2011)

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Comparative production analysis of three phlebovirus nucleoproteins under denaturing or non-denaturing conditions for crystallographic studies. (2011)

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Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens. (2011)

Klosterman SJ, Subbarao KV, Kang S, Veronese P, Gold SE, Thomma BP, Chen Z, Henrissat B, Lee YH, Park J, Garcia-Pedrajas MD, Barbara DJ, Anchieta A, de Jonge R, Santhanam P, Maruthachalam K, Atallah Z, Amyotte SG, Paz Z, Inderbitzin P, Hayes RJ, Heiman DI, Young S, Zeng Q, Engels R, Galagan J, Cuomo CA, Dobinson KF, Ma LJ

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The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi. (2011)

Eastwood DC, Floudas D, Binder M, Majcherczyk A, Schneider P, Aerts A, Asiegbu FO, Baker SE, Barry K, Bendiksby M, Blumentritt M, Coutinho PM, Cullen D, de Vries RP, Gathman A, Goodell B, Henrissat B, Ihrmark K, Kauserud H, Kohler A, Labutti K, Lapidus A, Lavin JL, Lee YH, Lindquist E, Lilly W, Lucas S, Morin E, Murat C, Oguiza JA, Park J, Pisabarro AG, Riley R, Rosling A, Salamov A, Schmidt O, Schmutz J, Skrede I, Stenlid J, Wiebenga A, Xie X, Kues U, Hibbett DS, Hoffmeister D, Hogberg N, Martin F, Grigoriev IV, Watkinson SC

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Intrinsic disorder in measles virus nucleocapsids. (2011)

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Crystallization and preliminary x-ray diffraction analysis of the hyperthermophilic Sulfolobus islandicus Lactonase (2011)

Gotthard G, Hiblot J, Elias M, Chabriere E

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A novel, non-catalytic carbohydrate-binding modules displays specificity for galactose-containing polysaccharides through calcium-mediated oligomerization. (2011)

Montanier CY, Correia MA, Flint JE, Zhu Y, McKee LS, Prates JA, Polizzi SJ, Coutinho PM, Lewis RJ, Henrissat B, Fontes CM, Gilbert HJ

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Mimivirus shows dramatic genome reduction after intraamoebal culture. (2011)

Boyer M, Azza S, Barrassi L, Klose T, Campocasso A, Pagnier I, Fournous G, Borg A, Robert C, Zhang X, Desnues C, Henrissat B, Rossmann MG, La Scola B, Raoult D

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Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis (2011)

Goodwin SB, Ben M'Barek S, Dhillon B, Wittenberg AHJ, Crane CF, Hane JK, Foster AJ, Van der Lee TAJ, Grimwood J, Aerts A, Antoniw J, Bailey A, Bluhm B, Bowler J, Bristow J, van der Burgt A, Canto-Canche B, Churchill ACL, Conde-Ferraez L, Cools HJ, Coutinho PM, Csukai M, Dehal P, De Wit P, Donzelli B, van de Geest HC, van Ham RCHJ, Hammond-Kosack KE, Henrissat B, Kilian A, Kobayashi AK, Koopmann E, Kourmpetis V, Kuzniar A, Lindquist E, Lombard V, Maliepaard C, Martins N, Mehrabi R, Nap JPH, Ponomarenko A, Rudd JJ, Salamov A, Schmutz J, Schouten HJ, Shapiro H, Stergiopoulos I, Torriani SFF, Tu H, de Vries RP, Waalwijk C, Ware SB, Wiebenga A, Zwiers L-H, Oliver RP, Grigoriev IV, Kema GHJ

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Crystal Structure and Functional Analysis of the SARS-Coronavirus RNA Cap 2'-O-Methyltransferase nsp10/nsp16 Complex. (2011)

Decroly E, Debarnot C, Ferron F, Bouvet M, Coutard B, Imbert I, Gluais L, Papageorgiou N, Sharff A, Bricogne G, Ortiz-Lombardia M, Lescar J, Canard B

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Mycobacterium tuberculosis Complex Mycobacteria as Amoeba-Resistant Organisms. (2011)

Mba Medie F, Ben Salah I, Henrissat B, Raoult D, Drancourt M

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Obligate biotrophy features unraveled by the genomic analysis of rust fungi. (2011)

Duplessis S, Cuomo CA, Lin YC, Aerts A, Tisserant E, Veneault-Fourrey C, Joly DL, Hacquard S, Amselem J, Cantarel BL, Chiu R, Coutinho PM, Feau N, Field M, Frey P, Gelhaye E, Goldberg J, Grabherr MG, Kodira CD, Kohler A, Kues U, Lindquist EA, Lucas SM, Mago R, Mauceli E, Morin E, Murat C, Pangilinan JL, Park R, Pearson M, Quesneville H, Rouhier N, Sakthikumar S, Salamov AA, Schmutz J, Selles B, Shapiro H, Tanguay P, Tuskan GA, Henrissat B, Van de Peer Y, Rouze P, Ellis JG, Dodds PN, Schein JE, Zhong S, Hamelin RC, Grigoriev IV, Szabo LJ, Martin F

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Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans. (2011)

Muegge BD, Kuczynski J, Knights D, Clemente JC, Gonzalez A, Fontana L, Henrissat B, Knight R, Gordon JI

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Insights into plant biomass conversion from the genome of the anaerobic thermophilic bacterium Caldicellulosiruptor bescii DSM 6725. (2011)

Dam P, Kataeva I, Yang SJ, Zhou F, Yin Y, Chou W, Poole FL 2nd, Westpheling J, Hettich R, Giannone R, Lewis DL, Kelly R, Gilbert HJ, Henrissat B, Xu Y, Adams MW

Nucleic Acids Res 39 3240-3254
The α-glucuronidase Agu1 from Schizophyllum commune is a member of a novel glycoside hydrolase family (GH115) (2011)

Chong SL, Battaglia E, Coutinho PM, Henrissat B, Maija Tenkanen M, de Vries RP

Appl. Microbiol. Biotechnol. 90 1323-1332
Probing structural transitions in both structured and disordered proteins using site-directed spin-labeling EPR spectroscopy (2011)

Longhi S, Belle V, Fournel A, Guigliarelli B and Carriere F

Journal of Peptide Science 17(5) 315-28
Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma. (2011)

Kubicek CP, Herrera-Estrella A, Seidl-Seiboth V, Martinez DA, Druzhinina IS, Thon M, Zeilinger S, Casas-Flores S, Horwitz BA, Mukherjee PK, Mukherjee M, Kredics L, Alcaraz LD, Aerts A, Antal Z, Atanasova L, Cervantes-Badillo MG, Challacombe J, Chertkov O, McCluskey K, Coulpier F, Deshpande N, von Doehren H, Ebbole DJ, Esquivel-Naranjo EU, Fekete E, Flipphi M, Glaser F, Gomez-Rodriguez EY, Gruber S, Han C, Henrissat B, Hermosa R, Hernandez-Onate M, Karaffa L, Kosti I, Le Crom S, Lindquist E, Lucas S, Lubeck M, Lubeck PS, Margeot A, Metz B, Misra M, Nevalainen H, Omann M, Packer N, Perrone G, Uresti-Rivera EE, Salamov A, Schmoll M, Seiboth B, Shapiro H, Sukno S, Tamayo-Ramos JA, Tisch D, Wiest A, Wilkinson HH, Zhang M, Coutinho PM, Kenerley CM, Monte E, Baker SE, Grigoriev IV

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Phylogenetic and gene-centric metagenomics of the canine intestinal microbiome reveals similarities with humans and mice. (2011)

Swanson KS, Dowd SE, Suchodolski JS, Middelbos IS, Vester BM, Barry KA, Nelson KE, Torralba M, Henrissat B, Coutinho PM, Cann IK, White BA, Fahey GC Jr

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Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum. (2011)

Sucgang R, Kuo A, Tian X, Salerno W, Parikh A, Feasley CL, Dalin E, Tu H, Huang E, Barry K, Lindquist E, Shapiro H, Bruce D, Schmutz J, Salamov A, Fey P, Gaudet P, Anjard C, Babu MM, Basu S, Bushmanova Y, van der Wel H, Katoh-Kurasawa M, Dinh C, Coutinho PM, Saito T, Elias M, Schaap P, Kay RR, Henrissat B, Eichinger L, Rivero F, Putnam NH, West CM, Loomis WF, Chisholm RL, Shaulsky G, Strassmann JE, Queller DC, Kuspa A, Grigoriev IV

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Picornavirus non-structural proteins as targets for new anti-virals with broad activity. (2011)

Norder H, De Palma AM, Selisko B, Costenaro L, Papageorgiou N, Arnan C, Coutard B, Lantez V, De Lamballerie X, Baronti C, Sola M, Tan J, Neyts J, Canard B, Coll M, Gorbalenya AE, Hilgenfeld R

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Genome and transcriptome analyses of the mountain pine beetle-fungal symbiont Grosmannia clavigera, a lodgepole pine pathogen. (2011)

Diguistini S, Wang Y, Liao NY, Taylor G, Tanguay P, Feau N, Henrissat B, Chan SK, Hesse-Orce U, Alamouti SM, Tsui CK, Docking RT, Levasseur A, Haridas S, Robertson G, Birol I, Holt RA, Marra MA, Hamelin RC, Hirst M, Jones SJ, Bohlmann J, Breuil C

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Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: an highly specialized approach to carbohydrate degradation depicted at genome level. (2011)

Battaglia E, Benoit I, van den Brink J, Wiebenga A, Coutinho PM, Henrissat B, de Vries RP

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Structural insights and ab initio sequencing within the DING proteins family (2011)

Elias M, Liebschner D, Gotthard G, Chabriere E

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Podospora anserina hemicellulases potentiate Trichoderma reesei secretome for the saccharification of lignocellulosic biomass. (2011)

Couturier M, Haon M, Coutinho PM, Henrissat B, Lesage-Meessen L, Berrin JG

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Mycobacterium tuberculosis Rv1090 and Rv1987 encode functional b-glucan-targeting proteins (2011)

Mba Medie F, Vincentelli R, Drancourt M, Henrissat B

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Structural insights into the exquisite selectivity of neurexin/neuroligin synaptic interactions. (2010)

Leone P, Comoletti D, Ferracci G, Conrod S, Garcia SU, Taylor P, Bourne Y, Marchot P

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Crystal structure of Bacillus subtilis SPP1 phage gp23.1, a putative chaperone. (2010)

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Characterization of antigens for Q fever serodiagnostics. (2010)

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3'-Deoxy phosphoramidate dinucleosides as improved inhibitors of hepatitis C virus subgenomic replicon and NS5B polymerase activity. (2010)

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Structure and molecular assignment of lactococcal phage TP901-1 baseplate. (2010)

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High affinity binding between Hsp70 and the C-terminal domain of the measles virus nucleoprotein requires an Hsp40 co-chaperone. (2010)

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A new system for expressing recombinant animal toxins in E. coli? (2010)

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Structural determinants for interaction of partial agonists with acetylcholine binding protein and neuronal alpha7 nicotinic acetylcholine receptor. (2009)

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Crystal structure and function of a DARPin neutralizing inhibitor of lactococcal phage TP901-1: Comparison of DARPin and camelid VHH binding mode. (2009)

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Analysis of the Structural and Functional Diversity of Plant Cell Wall Specific Family 6 Carbohydrate Binding Modules. (2009)

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For Whom the Bell Tolls? DING Proteins in Health and Disease. (2009)

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Elucidation of the phosphate binding mode of DING proteins revealed by sub-Angstrom X-ray crystallography (2009)

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Structure and function of phage p2 ORF34(p2), a new type of single-stranded DNA binding protein. (2009)

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The genome of Nectria haematococca : contribution of supernumerary chromosomes to gene expansion. (2009)

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The Crystal Structures of Chikungunya and Venezuelan Equine Encephalitis Virus nsP3 Macro Domains Define a Conserved Adenosine Binding Pocket. (2009)

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Insecticidal peptides from the theraposid spider Brachypelma albiceps: An NMR-based model of Ba2. (2009)

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Queen bee pheromone binding protein ph induced domain-swapping favors pheromone release. (2009)

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Identification of allosteric inhibitors blocking the Hepatitis C Virus polymerase NS5B in the RNA synthesis initiation step. (2009)

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Post-genomic insights into the plant polysaccharide degradation potential of Aspergillus nidulans and comparison to Aspergillus niger and Aspergillus oryzae (2009)

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Flaviviral methyltransferase/RNA interaction: structural basis for enzyme inhibition. (2009)

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The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms). (2009)

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The interaction between the measles virus nucleoprotein and the Interferon Regulator Factor 3 relies on a specific cellular environment. (2009)

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Interaction between the C-terminal domains of N and P proteins of measles virus investigated by NMR. (2009)

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Revised Mimivirus major capsid protein sequence reveals intron-containing gene structure and extra domain. (2009)

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A pyrazolotriazolopyrimidinamine inhibitor of bovine viral diarrhea virus replication that targets the viral RNA-dependent RNA polymerase. (2009)

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Mammalian G-protein-coupled receptor expression in Escherichia coli: I. High-throughput large-scale production as inclusion bodies. (2009)

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Structural and Biochemical Analysis of Human Pathogenic Astrovirus Serine Protease at 2.0 A Resolution. (2009)

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Crystal structure of a Methyltransferase from a No-Known-Vector Flavivirus. (2009)

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Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas (2009)

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Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla. (2009)

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Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion. (2009)

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Three genomes from the phylum Acidobacteria provide insight into their lifestyles in soils. (2009)

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Tropheryma whipplei glycosylation in the pathophysiologic profile of Whipple's disease. (2009)

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Intrinsic disorder in Viral Proteins Genome-Linked: experimental and predictive analyses. (2009)

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Camelid nanobodies raised against an integral membrane enzyme, nitric oxide reductase. (2009)

Conrath K, Pereira AS, Martins CE, Timoteo CG, Tavares P, Spinelli S, Kinne J, Flaudrops C, Cambillau C, Muyldermans S, Moura I, Moura JJ, Tegoni M, Desmyter A

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Nucleocapsid structure and function. (2009)

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Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases (2009)

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Crystal Structure of ORF12 from Lactococcus lactis phage p2 Identifies a Tape Measure Protein Chaperone. (2009)

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A core gut microbiome in obese and lean twins. (2009)

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Human Discs Large Is a New Negative Regulator of HIV-1 Infectivity. (2009)

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The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics (2009)

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The C-terminal segment of the cysteine-rich interdomain of Plasmodium falciparum erythrocyte membrane protein 1 determines CD36 binding and elicits antibodies that inhibit adhesion of parasite-infected erythrocytes. (2008)

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Chemical Synthesis and Characterization of J46 Peptide, an Atypical Class IIa Bacteriocin from Lactococcus lactis subsp. cremoris J46 Strain. (2008)

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Glycosyltransferases: Structures, Functions and Mechanisms (2008)

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The genome sequence of the model ascomycete fungus Podospora anserina. (2008)

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Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 (2008)

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Green fluorescent protein and factorial approach: an effective partnership for screening the soluble expression of recombinant proteins in Escherichia coli. (2008)

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The flavivirus polymerase as a target for drug discovery. (2008)

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The crystal structure of coxsackievirus B3 RNA-dependent RNA polymerase in complex with its protein primer VPg confirms the existence of a second VPg binding site on Picornaviridae polymerases. (2008)

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Mapping alpha-helical induced folding within the intrinsically disordered C-terminal domain of the measles virus nucleoprotein by site-directed spin-labeling EPR spectroscopy. (2008)

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Towards the design of antiviral inhibitors against flaviviruses: The case for the multifunctional NS3 protein from Dengue virus as a target. (2008)

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Biochemical and structural characterization of the intracellular mannanase AaManA of Alicyclobacillus acidocaldarius reveals a novel glycoside hydrolase family belonging to Clan GH-A. (2008)

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Epileptic and developmental disorders of the speech cortex: ligand/receptor interaction of wild-type and mutant SRPX2 with the plasminogen activator receptor uPAR. (2008)

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Divergence of catalytic mechanism within a glycosidase family provides insight into evolution of carbohydrate metabolism by human gut flora. (2008)

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Structure of Human Pancreatic Lipase-Related Protein 2 with the Lid in an Open Conformation. (2008)

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Phosphoramidate Dinucleosides as Hepatitis C Virus Polymerase Inhibitors. (2008)

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The thiazolobenzimidazole TBZE-029 inhibits enteroviral replication by targeting a short region immediately downstream motif C in the non-structural protein 2C. (2008)

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Structural Basis of the Honey Bee PBP Pheromone and pH-induced Conformational Change. (2008)

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J Bacteriol 190 5455-5463
Genome sequence of the metazoan plant-specific nematode Meloidogyne incognita (2008)

Abad P, Gouzy J, Aury JM, Castagnone-Sereno P, Danchin EGJ, Deleury E, Perfus-Barbeoch L, Anthouard V, Artiguenave F, Blok VC, Caillaud MC, Coutinho PM, Dasilva C, De Luca F, Deau F, Esquibet M, Flutre T, Goldstone JV, Hamamouch N, Hewezi T, Jaillon O, Jubin C, Leonetti P, Magliano M, Maier TR, Markov GV, McVeigh P, Pesole G, Poulain J, Robinson-Rechavi M, Sallet E, Segurens B, Steinbach D, Tytgat T, Ugarte E, van Ghelder C, Veronico P, Baum TJ, Blaxter M, Bleve-Zacheo T, Davis EL, Ewbank JJ, Favery B, Grenier E, Henrissat B, Jones JT, Laudet V, Maule AG, Quesneville H, Rosso MN, Schiex T, Smant G, Weissenbach J, Wincker P

Nat Biotechnol 26 909-915
Structural basis for natural lactonase and promiscuous phosphotriesterase activities (2008)

Elias M, Dupuy J, Merone L, Mandrich L, Porzio E, Moniot S, Rochu D, Lecomte C, Rossi M, Masson P, Manco G, Chabriere E

J Mol Biol 379 1017-28
Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina) (2008)

Martinez D, Berka RM, Henrissat B, Saloheimo M, Arvas M, Baker SE, Chapman J, Chertkov O, Coutinho PM, Cullen D, Danchin EGJ, Grigoriev IV, Harris P, Jackson M, Kubicek CP, Han CS, Ho I, Larrondo LF, Lopez de Leon A, Magnuson JK, Merino S, Misra M, Nelson B, Putnam N, Robbertse B, Salamov AA, Schmoll M, Terry A, Thaye N, Westerholm-Parvinen A, Schoch CL, Yao J, Barbote R, Nelson MA, Detter C, Bruce D, Kuske CR, Xie G, Richardson P, Rokhsar DS, Lucas SM, Rubin EM, Dunn-Coleman N, Ward M, Brettin TS

Nat Biotechnol 26 553-560
Tandem use of X-ray crystallography and mass spectrometry to obtain ab initio the complete and exact amino acids sequence of HPBP, a human 38kDa apolipoprotein (2008)

Diemer H, Elias M, Renault F, Rochu D, Contreras-Martel C, Schaeffer C, Van Dorsselaer A, Chabriere E

Proteins 71 1708-1720
FOLy: an integrated database for the classification and functional annotation of fungal oxidoreductases potentially involved in the degradation of lignin and related aromatic compounds (2008)

Levasseur A, Piumi F, Coutinho PM, Rancurel C, Asther M, Delattre M, Henrissat B, Pontarotti P, Asther M, Record E

Fungal Genet Biol 45 638-45
International research networks in viral structural proteomics: Again, lessons from SARS. (2008)

Canard B, Joseph JS, Kuhn P

Antiviral Res 78 47-50
The VIZIER project: Preparedness against pathogenic RNA viruses. (2008)

Coutard B, Gorbalenya AE, Snijder EJ, Leontovich AM, Poupon A, De Lamballerie X, Charrel R, Gould EA, Gunther S, Norder H, Klempa B, Bourhy H, Rohayem J, L'hermite E, Nordlund P, Stuart DI, Owens RJ, Grimes JM, Tucker PA, Bolognesi M, Mattevi A, Coll M, Jones TA, Aqvist J, Unge T, Hilgenfeld R, Bricogne G, Neyts J, La Colla P, Puerstinger G, Gonzalez JP, Leroy E, Cambillau C, Romette JL, Canard B

Antiviral Res 78 37-46
Identification of a GH110 subfamily of alpha1,3-galactosidases: Novel enzymes for removal of the alpha3gal xenotransplantation antigen. (2008)

Liu QP, Yuan H, Bennett EP, Levery SB, Nudelman E, Spence J, Pietz G, Saunders K, White T, Olsson ML, Henrissat B, Sulzenbacher G, Clausen H.

J Biol Chem 283 8545-54
Differential Substrate Specificity and Kinetic Behavior in Escherichia coli YfdW and Oxalobacter formigenes Formyl-CoA Transferase. (2008)

Toyota CG, Berthold CL, Gruez A, J�nsson S, Lindqvist Y, Cambillau C, Richards NG.

J Bacteriol 190 2556-64
The SARS-Coronavirus PLnc domain of nsp3 as a replication/transcription scaffolding protein. (2008)

Imbert I, Snijder EJ, Dimitrova M, Guillemot JC, Lecine P, Canard B

Virus Res 133 136-48
Deswapping bovine odorant binding protein. (2008)

Ramoni R, Spinelli S, Grolli S, Conti V, Merli E, Cambillau C, Tegoni M

Biochim Biophys Acta 1784 651-7
The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis (2008)

Martin F, Aerts A, Ahren D, Brun A, Danchin EGJ, Duchaussoy F, Gibon J, Kohler A, Lindquist E, Pereda V, Salamov A, Shapiro HJ, Wuyts J, Blaudez D, Buee M, Brokstein P, Canback B, Cohen D, Courty PE, Coutinho PM, Delaruelle C, Detter JC, Deveau A, DiFazio S, Duplessis S, Fraissinet-Tachet L, Lucic E, Frey-Klett P, Fourrey C, Feussner I, Gay G, Grimwood J, Hoegger PJ, Jain P, Kilaru S, Labbe J, Lin YC, Legue V, Le Tacon F, Marmeisse R, Melayah D, Montanini B, Muratet M, Nehls U, Niculita-Hirzel H, Oudot-Le Secq MP, Peter M, Quesneville H, Rajashekar B, Reich M, Rouhier N, Schmutz J, Yin T, Chalot M, Henrissat B, Kues U, Lucas S, Van de Peer Y, Podila GK, Polle A, Pukkila PJ, Richardson PM, Rouze P, Sanders IR, Stajich JE, Tunlid A, Tuskan G, Grigoriev IV

Nature 452 88-92
Structure and biochemical analysis of Kokobera virus helicase. (2008)

Speroni S, De Colibus L, Mastrangelo E, Gould E, Coutard B, Forrester NL, Blanc S, Canard B, Mattevi A

Proteins 70 1120-3
A topological model of the baseplate of lactococcal phage tuc2009. (2008)

Sciara G, Blangy S, Siponen M, Mc Grath S, van Sinderen D, Tegoni M, Cambillau C, Campanacci V

J Biol Chem 283 2716-23
The translation of recombinant proteins in E. coli can be improved by in silico generating and screening random libraries of a 70/+96 mRNA region with respect to the translation initiation codon. (2008)

Care S, Bignon C, Pelissier MC, Blanc E, Canard B, Coutard B

Nucleic Acids Res 36 e6
Chemical synthesis and 1H-NMR 3D structure determination of AgTx2-MTX chimera, a new potential blocker for Kv1.2 channel, derived from MTX and AgTx2 scorpion toxins. (2008)

Pimentel C, M'barek S, Visan V, Grissmer S, Sampieri F, Sabatier JM, Darbon H, Fajloun Z

Protein Sci 17 107-18
Structures of mutants of cellulase CEL48F of Clostridium cellulolyticum in complex with long hemithio-cellooligosaccharides give rise to a new view of the substrate pathway during processive action. (2008)

Parsiegla G, Reverbel C, Tardif C, Driguez H and Haser R

J Mol Biol 375 499-510

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