Junior professor
Developing novel immunogens, vaccines and other biotherapeutics using deep learning-guided protein design. Our work places a special emphasis on viral glycoproteins and pathogens targeting mucosal sites.
PI of the Protein Design for Biotherapeutics team – PD4Bio
Yoann Aldon is a CNRS Professeur Junior at AFMB, where he leads the Protein Design for Biotherapeutics (PD4Bio) team. He obtained his PhD in 2019 at Imperial College London in the laboratory of Prof. Robin J. Shattock, focusing on vaccine design, adjuvantation, and the development of HIV-1 Envelope immunogens that progressed to a Phase I clinical trial. He subsequently carried out postdoctoral research with Prof. Rogier W. Sanders at the University of Amsterdam on the design of HIV-1 Env germline-targeting, shaping and polishing immunogens (currently under clinical evaluation), as well as on antibodies for therapeutic purposes. He further broadened his expertise to AI-based protein design methods in the laboratory of Dr. Neil P. King at the Institute for Protein Design (IPD), University of Washington.
His work now focuses on the development of next-generation immunogens, vaccines, and other biotherapeutics through AI-guided protein engineering, with a special interest in viral glycoproteins and other mucosa-targeting pathogens.
Tugba Atabey, Ronald Derking, Maddy Newby, Joey Bouhuijs, Jonne Snitselaar, Monique Vink, Yoann Aldon, Joel Allen, Max Crispin, Rogier Sanders
Journal of Virology 100 (2026)10.1128/jvi.01481-25
Tugba Atabey, Rogier Sanders, Yoann Aldon
Current HIV Research 23 (2025)10.2174/011570162X365229250527111140
Gregory Martin, Rebecca Russell, Philip Mundsperger, Scarlett Harris, Lu Jovanoska, Luiza Farache Trajano, Torben Schiffner, Katalin Fabian, Monica Tolazzi, Gabriella Scarlatti, Leon Mcfarlane, Hannah Cheeseman, Yoann Aldon, Edith Schermer, Marielle Breemen, Kwinten Sliepen, Dietmar Katinger, Renate Kunert, Rogier Sanders, Robin Shattock, Andrew Ward, Quentin Sattentau
NPJ vaccines 8:101 (2023)10.1038/s41541-023-00696-w
Tom Caniels, Max Medina-Ramírez, Jinsong Zhang, Anita Sarkar, Sonu Kumar, Alex Labranche, Ronald Derking, Joel Allen, Jonne Snitselaar, Joan Capella-Pujol, Iván del Moral Sánchez, Anila Yasmeen, Marilyn Diaz, Yoann Aldon, Tom P.L. Bijl, Sravani Venkatayogi, Joshua Martin Beem, Amanda Newman, Chuancang Jiang, Wen-Hsin Lee, Maarten Pater, Judith Burger, Mariëlle van Breemen, Steven de Taeye, Kimmo Rantalainen, Celia Labranche, Kevin Saunders, David Montefiori, Gabriel Ozorowski, Andrew Ward, Max Crispin, John Moore, Per Johan Klasse, Barton Haynes, Ian Wilson, Kevin Wiehe, Laurent Verkoczy, Rogier Sanders
Cell Reports Medicine 4:101003 (2023)10.1016/j.xcrm.2023.101003
Matthieu van Tilbeurgh, Pauline Maisonnasse, Jean-Louis Palgen, Monica Tolazzi, Yoann Aldon, Nathalie Dereuddre-Bosquet, Mariangela Cavarelli, Anne-Sophie Beignon, Ernesto Marcos-Lopez, Anne-Sophie Gallouet, Emmanuel Gilson, Gabriel Ozorowski, Andrew Ward, Ilja Bontjer, Paul Mckay, Robin Shattock, Gabriella Scarlatti, Rogier Sanders, Roger Le Grand
Cell Reports Medicine 3:100751 (2022)10.1016/j.xcrm.2022.100751
Mathieu Claireaux, Tom Caniels, Marlon de Gast, Julianna Han, Denise Guerra, Gius Kerster, Barbera van Schaik, Aldo Jongejan, Angela Schriek, Marloes Grobben, Philip Brouwer, Karlijn van der Straten, Yoann Aldon, Joan Capella-Pujol, Jonne Snitselaar, Wouter Olijhoek, Aafke Aartse, Mitch Brinkkemper, Ilja Bontjer, Judith Burger, Meliawati Poniman, Tom Bijl, Jonathan Torres, Jeffrey Copps, Isabel Cuella Martin, Steven de Taeye, Godelieve de Bree, Andrew Ward, Kwinten Sliepen, Antoine van Kampen, Perry Moerland, Rogier Sanders, Marit van Gils
Nature Communications 13:4539 (2022)10.1038/s41467-022-32232-0
Alessandra Gallinaro, Maria Franca Pirillo, Yoann Aldon, Serena Cecchetti, Zuleika Michelini, Antonella Tinari, Martina Borghi, Andrea Canitano, Paul Mckay, Roberta Bona, Maria Fenicia Vescio, Felicia Grasso, Maria Blasi, Silvia Baroncelli, Gabriella Scarlatti, Celia Labranche, David Montefiori, Mary Klotman, Rogier Sanders, Robin Shattock, Donatella Negri, Andrea Cara
NPJ vaccines 7:44 (2022)10.1038/s41541-022-00465-1
Thibaut Naninck, Nidhal Kahlaoui, Julien Lemaitre, Pauline Maisonnasse, Antoine de Mori, Quentin Pascal, Vanessa Contreras, Romain Marlin, Francis Relouzat, Benoît Delache, Cécile Hérate, Yoann Aldon, Marit van Gils, Nerea Zabaleta, Raphaël Ho Tsong Fang, Nathalie Bosquet, Rogier Sanders, Luk Vandenberghe, Catherine Chapon, Roger Le Grand
iScience 25:104101 (2022)10.1016/j.isci.2022.104101
Victor Yin, Szu-Hsueh Lai, Tom Caniels, Philip Brouwer, Mitch Brinkkemper, Yoann Aldon, Hejun Liu, Meng Yuan, Ian Wilson, Rogier Sanders, Marit van Gils, Albert Heck
ACS Central Science 7:1863-1873 (2021)10.1021/acscentsci.1c00804
Kathryn Hastie, Haoyang Li, Daniel Bedinger, Sharon Schendel, S. Moses Dennison, Kan Li, Vamseedhar Rayaprolu, Xiaoying Yu, Colin Mann, Michelle Zandonatti, Ruben Diaz Avalos, Dawid Zyla, Tierra Buck, Sean Hui, Kelly Shaffer, Chitra Hariharan, Jieyun Yin, Eduardo Olmedillas, Adrian Enriquez, Diptiben Parekh, Milite Abraha, Elizabeth Feeney, Gillian Horn, Yoann Aldon, Hanif Ali, Sanja Aracic, Ronald Cobb, Ross Federman, Joseph Fernandez, Jacob Glanville, Robin Green, Gevorg Grigoryan, Ana Lujan Hernandez, David Ho, Kuan-Ying Huang, John Ingraham, Weidong Jiang, Paul Kellam, Cheolmin Kim, Minsoo Kim, Hyeong Mi Kim, Chao Kong, Shelly Krebs, Fei Lan, Guojun Lang, Sooyoung Lee, Cheuk Lun Leung, Junli Liu, Yanan Lu, Anna Maccamy, Andrew Mcguire, Anne Palser, Terence Rabbitts, Zahra Rikhtegaran Tehrani, Mohammad Sajadi, Rogier Sanders, Aaron Sato, Liang Schweizer, Jimin Seo, Bingqing Shen, Jonne Snitselaar, Leonidas Stamatatos, Yongcong Tan, Milan Tomic, Marit van Gils, Sawsan Youssef, Jian Yu, Tom Yuan, Qian Zhang, Bjoern Peters, Georgia Tomaras, Timothy Germann, Erica Ollmann Saphire
Science 374:472-478 (2021)10.1126/science.abh2315
Pauline Maisonnasse, Yoann Aldon, Aurélien Marc, Romain Marlin, Nathalie Dereuddre-Bosquet, Natalia Kuzmina, Alec Freyn, Jonne Snitselaar, Antonio Gonçalves, Tom Caniels, Judith Burger, Meliawati Poniman, Ilja Bontjer, Virginie Chesnais, Ségolène Diry, Anton Iershov, Adam Ronk, Sonia Jangra, Raveen Rathnasinghe, Philip Brouwer, Tom Bijl, Jelle van Schooten, Mitch Brinkkemper, Hejun Liu, Meng Yuan, Chad Mire, Mariëlle van Breemen, Vanessa Contreras, Thibaut Naninck, Julien Lemaître, Nidhal Kahlaoui, Francis Relouzat, Catherine Chapon, Raphaël Ho Tsong Fang, Charlene Mcdanal, Mary Osei-Twum, Natalie St-Amant, Luc Gagnon, David Montefiori, Ian Wilson, Eric Ginoux, Godelieve de Bree, Adolfo García-Sastre, Michael Schotsaert, Lynda Coughlan, Alexander Bukreyev, Sylvie van der Werf, Jérémie Guedj, Rogier Sanders, Marit van Gils, Roger Le Grand
Nature Communications 12:6097 (2021)10.1038/s41467-021-26354-0
Carolina Herrera, Sarah Harman, Yoann Aldon, Paul Rogers, Naomi Armanasco, Paul Ziprin, Daniel Stieh, Jeremy Nuttall, Robin Shattock
AIDS. Official journal of the international AIDS Society 35:1907-1917 (2021)10.1097/QAD.0000000000002974
Yoann Aldon, Paul Mckay, Jorge Moreno Herrero, Annette Vogel, Réka Lévai, Pauline Maisonnasse, Nathalie Dereuddre-Bosquet, Heinrich Haas, Katalin Fábián, Roger Le Grand, Ugur Sahin, Robin Shattock
Molecular Therapy - Nucleic Acids 25:483-493 (2021)10.1016/j.omtn.2021.06.008
Ronald Derking, Joel Allen, Christopher Cottrell, Kwinten Sliepen, Gemma Seabright, Wen-Hsin Lee, Yoann Aldon, Kimmo Rantalainen, Aleksandar Antanasijevic, Jeffrey Copps, Anila Yasmeen, Albert Cupo, Victor Cruz Portillo, Meliawati Poniman, Niki Bol, Patricia van der Woude, Steven de Taeye, Tom L.G.M. van den Kerkhof, P.J. Klasse, Gabriel Ozorowski, Marit van Gils, John Moore, Andrew Ward, Max Crispin, Rogier Sanders
Cell Reports 35:108933 (2021)10.1016/j.celrep.2021.108933
Philip J.M. Brouwer, Mitch Brinkkemper, Pauline Maisonnasse, Nathalie Dereuddre-Bosquet, Marloes Grobben, Mathieu Claireaux, Marlon de Gast, Romain Marlin, Virginie Chesnais, Ségolène Diry, Joel Allen, Yasunori Watanabe, Julia Giezen, Gius Kerster, Hannah Turner, Karlijn van der Straten, Cynthia van der Linden, Yoann Aldon, Thibaut Naninck, Ilja Bontjer, Judith Burger, Meliawati Poniman, Anna Mykytyn, Nisreen M.A. Okba, Edith Schermer, Marielle van Breemen, Rashmi Ravichandran, Tom Caniels, Jelle van Schooten, Nidhal Kahlaoui, Vanessa Contreras, Julien Lemaître, Catherine Chapon, Raphaël Ho Tsong Fang, Julien Villaudy, Kwinten Sliepen, Yme van der Velden, Bart Haagmans, Godelieve de Bree, Eric Ginoux, Andrew Ward, Max Crispin, Neil King, Sylvie van der Werf, Marit van Gils, Roger Le Grand, Rogier Sanders
Cell 184:1188-1200.e19 (2021)10.1016/j.cell.2021.01.035
Chloe Rees-Spear, Luke Muir, Sarah Griffith, Judith Heaney, Yoann Aldon, Jonne Snitselaar, Peter Thomas, Carl Graham, Jeffrey Seow, Nayung Lee, Annachiara Rosa, Chloe Roustan, Catherine Houlihan, Rogier Sanders, Ravindra Gupta, Peter Cherepanov, Hans Stauss, Eleni Nastouli, Katie Doores, Marit van Gils, Laura Mccoy
Cell Reports 34:108890 (2021)10.1016/j.celrep.2021.108890
Philip Brouwer, Tom Caniels, Karlijn van der Straten, Jonne Snitselaar, Yoann Aldon, Sandhya Bangaru, Jonathan Torres, Nisreen Okba, Mathieu Claireaux, Gius Kerster, Arthur Bentlage, Marlies van Haaren, Denise Guerra, Judith Burger, Edith Schermer, Kirsten Verheul, Niels van der Velde, Alex van der Kooi, Jelle van Schooten, Mariëlle van Breemen, Tom Bijl, Kwinten Sliepen, Aafke Aartse, Ronald Derking, Ilja Bontjer, Neeltje Kootstra, W. Joost Wiersinga, Gestur Vidarsson, Bart Haagmans, Andrew Ward, Godelieve de Bree, Rogier Sanders, Marit van Gils
Science 369:643-650 (2020)10.1126/science.abc5902
Yoann Aldon, Sven Kratochvil, Robin Shattock, Paul Mckay
Journal of Immunology 204:903-913 (2020)10.4049/jimmunol.1901184
Anna Blakney, Paul Mckay, Bárbara Ibarzo Yus, Yoann Aldon, Robin Shattock
Gene Therapy 26:363-372 (2019)10.1038/s41434-019-0095-2
Anna Blakney, Paul Mckay, Dennis Christensen, Bárbara Ibarzo Yus, Yoann Aldon, Frank Follmann, Robin Shattock
Journal of Controlled Release 304:65-74 (2019)10.1016/j.jconrel.2019.04.043
Paul Mckay, Deniz Cizmeci, Yoann Aldon, Jeroen Maertzdorf, January Weiner, Stefan He Kaufmann, David Jm Lewis, Robert van den Berg, Giuseppe del Giudice, Robin Shattock
eLife 8 (2019)10.7554/eLife.46149
Yoann Aldon, Paul Mckay, Joel Allen, Gabriel Ozorowski, Réka Felfödiné Lévai, Monica Tolazzi, Paul Rogers, Linling He, Natalia de Val, Katalin Fábián, Gabriella Scarlatti, Jiang Zhu, Andrew Ward, Max Crispin, Robin Shattock
Cell Reports 24:3324-3338.e5 (2018)10.1016/j.celrep.2018.08.051
Sven Kratochvil, Paul Mckay, Jakub Kopycinski, Cynthia Bishop, Peter John Hayes, Luke Muir, Christopher Pinder, Deniz Cizmeci, Deborah King, Yoann Aldon, Bruce Wines, P. Mark Hogarth, Amy Chung, Stephen Kent, Kathrin Held, Christof Geldmacher, Len Dally, Nelson Santos, Tom Cole, Jill Gilmour, Sarah Fidler, Robin Shattock
Frontiers in Immunology 8 (2017)10.3389/fimmu.2017.00595
Paul Mckay, Jamie F.S. Mann, Aditya Pattani, Vicky Kett, Yoann Aldon, Deborah King, R. Karl Malcolm, Robin Shattock
Journal of Controlled Release 249:74-83 (2017)10.1016/j.jconrel.2017.01.018
Jamie F.S. Mann, John Tregoning, Yoann Aldon, Robin Shattock, Paul Mckay
Journal of Controlled Release 232:75-82 (2016)10.1016/j.jconrel.2016.04.022
Daniel Stieh, Deborah King, Katja Klein, Yoann Aldon, Paul Mckay, Robin Shattock
Retrovirology 12:81 (2015)10.1186/s12977-015-0207-z