Publications
AFMB collection in HAL: here
2016
Modulation of Re-initiation of Measles Virus Transcription at Intergenic Regions by PXD to NTAIL Binding Strength
Louis-Marie Bloyet, Joanna Brunel, Marion Dosnon, Véronique Hamon, Jenny Erales, Antoine Gruet, Carine Lazert, Christophe Bignon, Philippe Roche, Sonia Longhi, Denis Gerlier
PLoS Pathogens 12:e1006058 (2016)10.1371/journal.ppat.1006058
Development of a gene synthesis platform for the efficient large scale production of small genes encoding animal toxins
Ana Filipa Sequeira, Joana L. A. Bras, Catarina I. P. D. Guerreiro, Renaud Vincentelli, Carlos M. G. A. Fontes
BMC Biotechnology 16 (2016)10.1186/s12896-016-0316-3
Modulation of Re-initiation of Measles Virus Transcription at Intergenic Regions by PXD to NTAIL Binding Strength
Louis-Marie Bloyet, Joanna Brunel, Marion Dosnon, Véronique Hamon, Jenny Erales, Antoine Gruet, Carine Lazert, Christophe Bignon, Philippe Roche, Sonia Longhi, Denis Gerlier
PLoS Pathogens 12:e1006058 (2016)10.1371/journal.ppat.1006058
Structure and specificity of the Type VI secretion system ClpV-TssC interaction in enteroaggregative Escherichia coli
Badreddine Douzi, Yannick R Brunet, Silvia Spinelli, Valentine Lensi, Stephanie Blangy, Anant Kumar, Laure Journet, Pierre Legrand, E. Cascales, Christian Cambillau
Scientific Reports 6 (2016)10.1038/srep34405
Metagenomics unveils the attributes of the alginolytic guilds of sediments from four distant cold coastal environments
Marina N. Matos, Mariana Lozada, Luciano E. Anselmino, Matias A. Musumeci, Bernard Henrissat, Janet K. Jansson, Walter P. Mac Cormack, Jolynn Carroll, Sara Sjoling, Leif Lundgren, Hebe M. Dionisi
Environmental Microbiology 18:4471-4484 (2016)10.1111/1462-2920.13433
Coxsackievirus B3 protease 3C: expression, purification, crystallization and preliminary structural insights
Stavroula Fili, Alexandros Valmas, Magdalini Christopoulou, Maria Spiliopoulou, Nikos Nikolopoulos, Julie Lichiere, Souzana Logotheti, Fotini Karavassili, Eleftheria Rosmaraki, Andrew Fitch, Jonathan Wright, Detlef Beckers, Thomas Degen, Gwilherm Nenert, Rolf Hilgenfeld, Nicolas Papageorgiou, Bruno Canard, Bruno Coutard, Irene Margiolaki
Acta crystallographica Section F : Structural biology communications [2014-...] 72:877-884 (2016)10.1107/S2053230X16018513
CAZyChip: dynamic assessment of exploration of glycoside hydrolases in microbial ecosystems
Anne Abot, Grégory Arnal, Lucas Auer, Adèle Lazuka, Delphine Labourdette, Sophie Lamarre, Lidwine Trouilh, Elisabeth Laville, Vincent Lombard, Gabrielle Potocki-Veronese, Bernard Henrissat, Michael O’donohue, Guillermina Hernandez-Raquet, Claire Dumon, Véronique Le Berre
BMC Genomics 17:1-12 (2016)10.1186/s12864-016-2988-4
The chimeric nature of the genomes of marine magnetotactic coccoid-ovoid bacteria defines a novel group of Proteobacteria.
Boyang Ji, Sheng-Da Zhang, Wei-Jia Zhang, Zoe Rouy, François Alberto, Claire-Lise Santini, Sophie Mangenot, Séverine Gagnot, Nadège Philippe, Nathalie Pradel, Lichen Zhang, Sébastien Tempel, Ying Li, Claudine Médigue, Bernard Henrissat, Pedro M Coutinho, Valérie Barbe, Emmanuel Talla, Long-Fei Wu
Environmental Microbiology doi: 10.1111/1462-2920.13637 (2016)10.1111/1462-2920.13637
Schizosaccharomyces pombe kinesin-5 switches direction using a steric blocking mechanism
Adeline Goulet, Mishan Britto, Syeda Rizvi, Ottilie von Loeffelholz, Carolyn Moores, Robert Cross
Proceedings of the National Academy of Sciences of the United States of America 113:E7483-E7489 (2016)10.1073/pnas.1611581113
A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility
Mahesh S. Desai, Anna M. Seekatz, Nicole M. Koropatkin, Nobuhiko Kamada, Christina A. Hickey, Mathis Wolter, Nicholas A. Pudlo, Sho Kitamoto, Nicolas Terrapon, Arnaud Muller, Vincent B. Young, Bernard Henrissat, Paul Wilmes, Thaddeus S. Stappenbeck, Gabriel Nunez, Eric C. Martens
Cell 167:1339-1353 (2016)10.1016/j.cell.2016.10.043
Filovirus proteins for antiviral drug discovery: A structure/function analysis of surface glycoproteins and virus entry
Baptiste Martin, Thomas Hoenen, Bruno Canard, Etienne Decroly
Antiviral Research 135:1-14 (2016)10.1016/j.antiviral.2016.09.001
CAZyme content of Pochonia chlamydosporia reflects that chitin and chitosan modification are involved in nematode parasitism
Almudena Aranda-Martinez, Nicolas Lenfant, Nuria Escudero, Ernesto A. Zavala-Gonzalez, Bernard Henrissat, Luis V. Lopez-Llorca
Environmental Microbiology 18:4200-4215 (2016)10.1111/1462-2920.13544
Relationships of human alpha/beta hydrolase fold proteins and other organophosphate-interacting proteins
Nicolas Lenfant, Yves Bourne, Pascale Marchot, Arnaud Chatonnet
Chemico-Biological Interactions 259:343-351 (2016)10.1016/j.cbi.2016.04.027
Functional and structural dissection of the tape measure protein of lactococcal phage TP901-1
Jennifer Mahony, Mona Alqarni, Stephen Stockdale, Silvia Spinelli, Marine Feyereisen, Christian Cambillau, Douwe Van Sinderen
Scientific Reports 6 (2016)10.1038/srep36667
Structure–Function Analysis of the TssL Cytoplasmic Domain Reveals a New Interaction between the Type VI Secretion Baseplate and Membrane Complexes
Abdelrahim Zoued, Chloé J Cassaro, Eric Durand, Badreddine Douzi, Alexandre España, Christian Cambillau, Laure Journet, E. Cascales
Journal of Molecular Biology 428:4413-4423 (2016)10.1016/j.jmb.2016.08.030
Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2
S. Haridas, R. Albert, M. Binder, J. Bloem, Kurt Labutti, A. Salamov, B. Andreopoulos, S.E. Baker, Kerrie Barry, G. Bills, B.H. Bluhm, C. Cannon, R. Castanera, D.E. Culley, C. Daum, D. Ezra, J.B. González, Bernard Henrissat, A. Kuo, C. Liang, Anna Lipzen, F. Lutzoni, J. Magnuson, S.J. Mondo, M. Nolan, R.A. Ohm, J. Pangilinan, H.-J. Park, L. Ramírez, M. Alfaro, H. Sun, A. Tritt, Y. Yoshinaga, L.-H. Zwiers, B.G. Turgeon, S.B. Goodwin, J.W. Spatafora, P.W. Crous, I.V. Grigoriev, Thirumalaiselvi Ulaganathan, Rong Shi, Deqiang Yao, Ruo-Xu Gu, Marie-Line Garron, Maia Cherney, D Peter Tieleman, Eric Sterner, Guoyun Li, Lingyun Li, Robert Linhardt, Miroslaw Cygler, Niël van Wyk, Michel Drancourt, Laurent Kremer, Otto Miettinen, Robert Riley, Dan Cullen, Ronald de Vries, Matthieu Hainaut, Annele Hatakka, Kristiina Hildén, Rita Kuo, Miia Mäkelä, Laura Sandor, Joseph Spatafora, Igor Grigoriev, David Hibbett
Genome Announcements 4:112-122 (2016)10.1128/genomeA.00976-16
Viral Macro Domains Reverse Protein ADP-Ribosylation
Changqing Li, Yannick Debing, Gytis Jankevicius, Johan Neyts, Ivan Ahel, Bruno Coutard, Bruno Canard
Journal of Virology 90:8478-8486 (2016)10.1128/JVI.00705-16
The Mechanism by Which Arabinoxylanases Can Recognize Highly Decorated Xylans
Aurore Labourel, Lucy I. Crouch, Joana L. A. Bras, Adam Jackson, Artur Rogowski, Joseph Gray, Madhav P. Yadav, Bernard Henrissat, Carlos M. G. A. Fontes, Harry J. Gilbert, Shabir Najmudin, Arnaud Basle, Fiona Cuskin
Journal of Biological Chemistry 291:22149-22159 (2016)10.1074/jbc.M116.743948
Erratum: Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi
Stéphane Hacquard, Barbara Kracher, Kei Hiruma, Philipp C. Münch, Ruben Garrido-Oter, Michael R. Thon, Aaron Weimann, Ulrike Damm, Jean-Félix Dallery, Matthieu Hainaut, Bernard Henrissat, Olivier Lespinet, Soledad Sacristán, Emiel Ver Loren van Themaat, Eric Kemen, Alice C. Mchardy, Paul Schulze-Lefert, Richard O'Connell
Nature Communications 7 (2016)10.1038/ncomms13072
Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum
Martina Peter, Annegret Kohler, Robin A. Ohm, Alan Kuo, Jennifer Kruetzmann, Emmanuelle Morin, Matthias Arend, Kerrie W. Barry, Manfred Binder, Cindy Choi, Alicia Clum, Alex Copeland, Nadine Grisel, Sajeet Haridas, Tabea Kipfer, Kurt Labutti, Erika Lindquist, Anna Lipzen, Renaud Maire, Barbara Meier, Sirma Mihaltcheva, Virginie Molinier, Claude Murat, Stefanie Poeggeler, C. Alisha Quandt, Christoph Sperisen, Andrew Tritt, Emilie Tisserant, Pedro W. Crous, Bernard Henrissat, Uwe Nehls, Simon Egli, Joseph W. Spatafora, Igor V. Grigoriev, Francis M. Martin
Nature Communications 7:1-15 (2016)10.1038/ncomms12662
T7 Endonuclease I Mediates Error Correction in Artificial Gene Synthesis
Ana Filipa Sequeira, Catarina I. P. D. Guerreiro, Renaud Vincentelli, Carlos M. G. A. Fontes
Molecular Biotechnology 58:573-584 (2016)10.1007/s12033-016-9957-7
Betulinic Acid, The First Lupane-Type Triterpenoid Isolated from Both a Phomopsis sp. and Its Host Plant Diospyros carbonaria Benoist
Laure-Anne Peyrat, Véronique Eparvier, Cécilia Eydoux, Jean-Claude Guillemot, Marc Litaudon, Didier Stien
Chemistry and Biodiversity 14:e1600171 (2016)10.1002/cbdv.201600171
The Baseplate of Lactobacillus delbrueckii Bacteriophage Ld17 Harbors a Glycerophosphodiesterase
Anneleen Cornelissen, Irina Sadovskaya, Evgeny Vinogradov, Stephanie Blangy, Silvia Spinelli, Eoghan Casey, Jennifer Mahony, Jean-Paul Noben, Fabio Dal Bello, Christian Cambillau, Douwe Van Sinderen
Journal of Biological Chemistry 291:16816-16827 (2016)10.1074/jbc.M116.728279
Understanding plant cell-wall remodelling during the symbiotic interaction between Tuber melanosporum and Corylus avellana using a carbohydrate microarray
Fabiano Sillo, Jonatan U. Fangel, Bernard Henrissat, Antonella Faccio, Paola Bonfante, Francis Martin, William G. T. Willats, Raffaella Balestrini
Planta 244:347-359 (2016)10.1007/s00425-016-2507-5
Protein-Protein Interaction Inhibition (2P21)-Oriented Chemical Library Accelerates Hit Discovery
Sabine Milhas, Brigitt Raux, Stéphane Betzi, Carine Derviaux, Philippe Roche, Audrey Restouin, Marie-Jeanne Basse, Etienne Rebuffet, Adrien Lugari, Marion Badol, Rudra Kashyap, Jean-Claude Lissitzky, Cecilia Eydoux, Veronique Hamon, Marie -Edith Gourde, Sebastien Combes, Pascale Zimmermann, Michel Aurrand-Lions, Thomas Roux, Catherine Rogers, Susanne Muller, Stefan Knapp, Eric Trinquet, Yves Collette, Jean-Claude Guillemot, Xavier Morelli
ACS Chemical Biology 11:2140-2148 (2016)10.1021/acschembio.6b00286
Characterization of prophages containing "evolved" Dit/Tal modules in the genome of Lactobacillus casei BL23.
María Eugenia Dieterle, Joaquina Fina Martin, Rosario Durán, Sergio I Nemirovsky, Carmen Sanchez Rivas, Charles Bowman, Daniel Russell, Graham F Hatfull, Christian Cambillau, Mariana Piuri
Applied Microbiology and Biotechnology 100:9201-9215 (2016)10.1007/s00253-016-7727-x
Inhibitors and Antibody Fragments as Potential Anti-Inflammatory Therapeutics Targeting Neutrophil Proteinase 3 in Human Disease
Brice Korkmaz, Adam Lesner, Carla Guarino, Magdalena Wysocka, Christine Kellenberger, Herve Watier, Ulrich Specks, Francis Gauthier, Dieter E. Jenne
Pharmacological Reviews 68:603-630 (2016)10.1124/pr.115.012104
Draft Genome Sequence of the Deep-Sea Basidiomycetous Yeast Cryptococcus sp. Strain Mo29 Reveals Its Biotechnological Potential
V. Redou, A. Kumar, M. Hainaut, Bernard Henrissat, E. Record, G. Barbier, G. Burgaud
Genome Announcements 4 (2016)
Functional Exploration of the Polysaccharide Lyase Family PL6
Sophie Mathieu, Bernard Henrissat, Flavien Labre, Gudmund Skjak-Braek, William Helbert
PLoS ONE 11:1-15 (2016)10.1371/journal.pone.0159415
The mucin-degradation strategy of Ruminococcus gnavus: The importance of intramolecular trans-sialidases
E. H. Crost, L. E. Tailford, M. Monestier, D. Swarbreck, Bernard Henrissat, L. C. Crossman, N. Juge
Gut microbes 7:302-312 (2016)
Differential conformational modulations of MreB folding upon interactions with GroEL/ES and TRiC chaperonin components
S. Moparthi, Uno Carlsson, Renaud Vincentelli, Bengt-Harald Jonsson, Per Hammarström, Jérôme Wenger
Scientific Reports 6:28386 (2016)10.1038/srep28386
The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence
Sebastian Eves-van Den Akker, Dominik R. Laetsch, Peter Thorpe, Catherine J. Lilley, Etienne G. J. Danchin, Martine da Rocha, Corinne Rancurel, Nancy E. Holroyd, James A. Cotton, Amir Szitenberg, Eric Grenier, Josselin Montarry, Benjamin Mimee, Marc-Olivier Duceppe, Ian Boyes, Jessica M. C. Marvin, Laura M. Jones, Hazijah B. Yusup, Joel Lafond-Lapalme, Magali Esquibet, Michael Sabeh, Michael Rott, Hein Overmars, Anna Finkers-Tomczak, Geert Smant, Georgios Koutsovoulos, Vivian Blok, Sophie Mantelin, Peter J. A. Cock, Wendy Phillips, Bernard Henrissat, Peter E. Urwin, Mark Blaxter, John T. Jones
Genome Biology 17:1-23 (2016)10.1186/s13059-016-0985-1
Unraveling the pectinolytic function of Bacteroides xylanisolvens using a RNA-seq approach and mutagenesis
Jordane Despres, Evelyne Forano, Pascale Lepercq, Sophie Comtet-Marre, Grégory Jubelin, Carl J. Yeoman, Margret E. Berg Miller, Christopher J. Fields, Nicolas Terrapon, Carine Le Bourvellec, Catherine M. G. C. Renard, Bernard Henrissat, Bryan A. White, Pascale Mosoni
BMC Genomics 27 (2016)10.1186/s12864-016-2758-3
Structural Mimicry of Receptor Interaction by Antagonistic Interleukin-6 (IL-6) Antibodies
Christophe Blanchetot, Natalie de Jonge, Aline Desmyter, Nico Ongenae, Erik Hofman, Alex Klarenbeek, Ava Sadi, Anna Hultberg, Anke Kretz-Rommel, Silvia Spinelli, Remy Loris, Christian Cambillau, Hans De Haard
Journal of Biological Chemistry 291:13846-13854 (2016)10.1074/jbc.M115.695528
Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication
Luis M. Corrochano, Alan Kuo, Marina Marcet-Houben, Silvia Polaino, Asaf Salamov, Jose M. Villalobos-Escobedo, Jane Grimwood, M. Isabel Alvarez, Javier Avalos, Diane Bauer, Ernesto P. Benito, Isabelle Benoit, Gertraud Burger, Lola P. Camino, David Canovas, Enrique Cerda-Olmedo, Jan-Fang Cheng, Angel Dominguez, Marek Elias, Arturo P. Eslava, Fabian Glaser, Gabriel Gutierrez, Joseph Heitman, Bernard Henrissat, Enrique A. Iturriaga, B. Franz Lang, Jose L. Lavin, Soo Chan Lee, Wenjun Li, Erika Lindquist, Sergio Lopez-Garcia, Eva M. Luque, Ana T. Marcos, Joel Martin, Kevin Mccluskey, Humberto R. Medina, Alejandro Miralles-Duran, Atsushi Miyazaki, Elisa Munoz-Torres, Jose A. Oguiza, Robin A. Ohm, Maria Olmedo, Margarita Orejas, Lucila Ortiz-Castellanos, Antonio G. Pisabarro, Julio Rodriguez-Romero, Jose Ruiz-Herrera, Rosa Ruiz-Vazquez, Catalina Sanz, Wendy Schackwitz, Mahdi Shahriari, Ekaterina Shelest, Fatima Silva-Franco, Darren Soanes, Khajamohiddin Syed, Victor G. Tagua, Nicholas J. Talbot, Michael R. Thon, Hope Tice, Ronald P. De Vries, Ad Wiebenga, Jagjit S. Yadav, Edward L. Braun, Scott E. Baker, Victoriano Garre, Jeremy Schmutz, Benjamin A. Horwitz, Santiago Torres-Martinez, Alexander Idnurm, Alfredo Herrera-Estrella, Toni Gabaldon, Igor V. Grigoriev
Current Biology 26:1577-1584 (2016)10.1016/j.cub.2016.04.038
Complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition
Immacolata Venditto, Ana S. Luis, Maja Rydahl, Julia Schuckel, Vania O. Fernandes, Silvia Vidal-Melgosa, Pedro Bule, Arun Goyal, Virginia M. R. Pires, Catarina G. Dourado, Luis M. A. Ferreira, Pedro M Coutinho, Bernard Henrissat, J. Paul Knox, Arnaud Basle, Shabir Najmudin, Harry J. Gilbert, William G. T. Willats, Carlos M. G. A. Fontes
Proceedings of the National Academy of Sciences of the United States of America 113:7136-7141 (2016)10.1073/pnas.1601558113
Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi
Stéphane Hacquard, Barbara Kracher, Kei Hiruma, Philipp C. Münch, Ruben Garrido-Oter, Michael R. Thon, Aaron Weimann, Ulrike Damm, Jean-Félix Dallery, Matthieu Hainaut, Bernard Henrissat, Olivier Lespinet, Soledad Sacristán, Emiel Ver Loren van Themaat, Eric Kemen, Alice C. Mchardy, Paul Schulze-Lefert, Richard O'Connell
Nature Communications 7:1-12 (2016)10.1038/ncomms11362
Xylan degradation by the human gut Bacteroides xylanisolvens XB1A(T) involves two distinct gene clusters that are linked at the transcriptional level
Jordane Despres, Evelyne Forano, Pascale Lepercq, Sophie Comtet-Marre, Grégory Jubelin, Christophe Chambon, Carl J. Yeoman, Margaret E. Berg Miller, Christopher J. Fields, Eric Martens, Nicolas Terrapon, Bernard Henrissat, Bryan A. White, Pascale Mosoni
BMC Genomics 17 (2016)10.1186/s12864-016-2680-8
Identification and Structural Characterization of an Intermediate in the Folding of the Measles Virus X Domain
Daniela Bonetti, Carlo Camilloni, Lorenzo Visconti, Sonia Longhi, Maurizio Brunori, Michele Vendruscolo, Stefano Gianni
Journal of Biological Chemistry 291:10886+ (2016)10.1074/jbc.M116.721126
An essential role for the baseplate protein Gp45 in phage adsorption to Staphylococcus aureus
Xuehua Li, Cengiz Koc, Petra Kuehner, York-Dieter Stierhof, Bernhard Krismer, Mark C. Enright, Jose R. Penades, Christiane Wolz, Thilo Stehle, Christian Cambillau, Andreas Peschel, Guoqing Xia
Scientific Reports 6 (2016)10.1038/srep26455
Screening of a Library of FDA-Approved Drugs Identifies Several Enterovirus Replication Inhibitors That Target Viral Protein 2C
Rachel Ulferts, S. Matthijn De Boer, Lonneke van Der Linden, Lisa Bauer, Hey Rhyoung Lyoo, Maria J. Mate, Julie Lichiere, Bruno Canard, Daphne Lelieveld, Wienand Omta, David Egan, Bruno Coutard, Frank J. M. Van Kuppeveld
Antimicrobial Agents and Chemotherapy 60:2627-2638 (2016)10.1128/AAC.02182-15
Glycans affect DNA extraction and induce substantial differences in gut metagenomic studies
Emmanouil Angelakis, Dipankar Bachar, Bernard Henrissat, Fabrice Armougom, Gilles Audoly, Jean-Christophe J.-C. Lagier, Catherine Robert, Didier Raoult
Scientific Reports 6 (2016)10.1038/srep26276
In cellulo phosphorylation induces pharmacological reprogramming of maurocalcin, a cell-penetrating venom peptide
Michel Ronjat, Wei Feng, Lucie Dardevet, Yao Dong, Sawsan Al Khoury, Franck Claude Chatelain, Virginie Vialla, Samir Chahboun, Florian Lesage, Hervé Darbon, Isaac Pessah, Michel de Waard
Proceedings of the National Academy of Sciences of the United States of America 113:E2460-E2468 (2016)10.1073/pnas.1517342113
The molecular basis of polysaccharide cleavage by lytic polysaccharide monooxygenases
Kristian E. H. Frandsen, Thomas J. Simmons, Paul Dupree, Jens-Christian N. Poulsen, Glyn R. Hemsworth, Luisa Ciano, Esther M. Johnston, Morten Tovborg, Katja S. Johansen, Pernille Von Freiesleben, Laurence Marmuse, Sebastien Fort, Sylvain Cottaz, Hugues Driguez, Bernard Henrissat, Nicolas Lenfant, Floriana Tuna, Amgalanbaatar Baldansuren, Gideon J. Davies, Leila Lo Leggio, Paul H. Walton
Nature Chemical Biology 12:298+ (2016)10.1038/NCHEMBIO.2029
Reevaluation of possible outcomes of infections with human immunodeficiency virus
C. Tamalet, Philippe Colson, Etienne Decroly, C. Dhiver, I. Ravaux, A. Stein, Didier Raoult
Clinical Microbiology and Infection 22:299-311 (2016)10.1016/j.cmi.2015.11.022
Combining somatic mutations present in different in vivo affinity-matured antibodies isolated from immunized Lama glama yields ultra-potent antibody therapeutics
Alex Klarenbeek, Christophe Blanchetot, Georg Schragel, Ava S. Sadi, Nico Ongenae, Wieger Hemrika, John Wijdenes, Silvia Spinelli, Aline Desmyter, Christian Cambillau, Anna Hultberg, Anke Kretz-Rommel, Torsten Dreier, Hans J. W. de Haard, Rob C. Roovers
Protein Engineering, Design and Selection 29:123-133 (2016)10.1093/protein/gzw003
The methyltransferase domain of dengue virus protein NS5 ensures efficient RNA synthesis initiation and elongation by the polymerase domain (vol 42, pg 11642, 2014)
Supanee Potisopon, Stephane Priet, Axelle Collet, Etienne Decroly, Bruno Canard, Barbara Selisko
Nucleic Acids Research 44:2974 (2016)10.1093/nar/gkv1294
A phospholipase A 1 antibacterial Type VI secretion effector interacts directly with the C-terminal domain of the VgrG spike protein for delivery
Nicolas Flaugnatti, Thi Thu Hang Le, Stéphane Canaan, Marie-Stéphanie Aschtgen, Vân Nguyên, Stephanie Blangy, Christine Kellenberger, Alain Roussel, Christian Cambillau, E. Cascales, Laure Journet
Molecular Microbiology 99:1099-1118 (2016)10.1111/mmi.13292
Priming and polymerization of a bacterial contractile tail structure. 1" 2" 17
Abdelrahim Zoued, Eric Durand, Yannick R Brunet, Silvia Spinelli, Badreddine Douzi, Mathilde Guzzo, Nicolas Flaugnatti, Pierre Legrand, Laure Journet, Rémi Fronzes, Tam Mignot, Christian Cambillau, E. Cascales
Nature 531:59-63 (2016)10.1038/nature17182
Dividing the Large Glycoside Hydrolase Family 43 into Subfamilies: a Motivation for Detailed Enzyme Characterization
Keith Mewis, Nicolas Lenfant, Vincent Lombard, Bernard Henrissat
Applied and Environmental Microbiology 82:1686-1692 (2016)10.1128/AEM.03453-15
Structural characterization of the N-terminal part of the MERS-CoV nucleocapsid by X-ray diffraction and small-angle X-ray scattering
Nicolas Papageorgiou, Julie Lichiere, Amal Baklouti, Francois Ferron, Marion Sevajol, Bruno Canard, Bruno Coutard
Acta crystallographica Section D : Structural biology [1993-...] 72:192-202 (2016)10.1107/S2059798315024328
Exploring Selective Inhibition of the First Bromodomain of the Human Bromodomain and Extra-terminal Domain (BET) Proteins
Brigitt Raux, Yuliia Voitovich, Carine Derviaux, Adrien Lugari, Etienne Rebuffet, Sabine Milhas, Stephane Priet, Thomas Roux, Eric Trinquet, Jean-Claude Guillemot, Stefan Knapp, Jean-Michel Brunel, Alexey Yu. Fedorov, Yves Collette, Philippe Roche, Stéphane Betzi, Sebastien Combes, Xavier Morelli
Journal of Medicinal Chemistry 59:1634-1641 (2016)10.1021/acs.jmedchem.5b01708
Fuzzy regions in an intrinsically disordered protein impair protein-protein interactions
Antoine Gruet, Marion Dosnon, David Blocquel, Joanna Brunel, Denis Gerlier, Rahul K. Das, Daniela Bonetti, Stefano Gianni, Monika Fuxreiter, Sonia Longhi, Christophe Bignon
FEBS Journal 283:576-594 (2016)10.1111/febs.13631
MICROBIOME Gut bacteria that prevent growth impairments transmitted by microbiota from malnourished children
Laura V. Blanton, Mark R. Charbonneau, Tarek Salih, Michael J. Barratt, Siddarth Venkatesh, Olga Ilkaveya, Sathish Subramanian, Mark J. Manary, Indi Trehan, Josh M. Jorgensen, Yue-Mei Fan, Bernard Henrissat, Semen A. Leyn, Dmitry A. Rodionov, Andrei L. Osterman, Kennethm. Maleta, Christopher B. Newgard, Per Ashorn, Kathryn G. Dewey, Jeffrey I. Gordon
Science 351:830-U57 (2016)10.1126/science.aad3311
Consequences of contaminant mixture on the dynamics and functional diversity of bacterioplankton in a southwestern Mediterranean coastal ecosystem
Olivier Pringault, Céline Lafabrie, Murielle Avezac, Chrystelle Bancon-Montigny, Claire Carré, Mohamed Chalghaf, Sophie Delpoux, Adrien Duvivier, Françoise Elbaz-Poulichet, Catherine Gonzalez, Patrice Got, Christophe Leboulanger, Sylvie Spinelli, Asma Sakka Hlaili, Marc Bouvy
Chemosphere 144:1060-1073 (2016)10.1016/j.chemosphere.2015.09.093
Steric and Dynamic Parameters Influencing In Situ Cycloadditions to Form Triazole Inhibitors with Crystalline Acetylcholinesterase
Yves Bourne, K. Barry Sharpless, Palmer Taylor, Pascale Marchot
Journal of the American Chemical Society 138:1611-1621 (2016)10.1021/jacs.5b11384
Novel 2-phenyl-5-[(E)-2-(thiophen-2-yl)ethenyl]-1,3,4-oxadiazole and 3-phenyl-5-[(E)-2-(thiophen-2-yl)ethenyl]-1,2,4-oxadiazole derivatives as dengue virus inhibitors targeting NS5 polymerase
Fatiha Benmansour, Cecilia Eydoux, Gilles Querat, Xavier de Lamballerie, Bruno Canard, Karine Alvarez, Jean-Claude Guillemot, Karine Barral
European Journal of Medicinal Chemistry 109:146-156 (2016)10.1016/j.ejmech.2015.12.046
How disordered is my protein and what is its disorder for? A guide through the “dark side” of the protein universe
Philippe Lieutaud, François Ferron, Alexey V Uversky, Lukasz Kurgan, Vladimir N Uversky, Sonia Longhi
Intrinsically Disordered Proteins 4:e1259708 (2016)10.1080/21690707.2016.1259708
Structure-Function Analysis of a Mixed-linkage beta-Glucanase/Xyloglucanase from the Key Ruminal Bacteroidetes Prevotella bryantii B(1)4
Nicholas Mcgregor, Mariya Morar, Thomas Hauch Fenger, Peter Stogios, Nicolas Lenfant, Victor Yin, Xiaohui Xu, Elena Evdokimova, Hong Cui, Bernard Henrissat, Alexei Savchenko, Harry Brumer
Journal of Biological Chemistry 291:1175-1197 (2016)10.1074/jbc.M115.691659
Unraveling the pectinolytic function of Bacteroides xylanisolvens using a RNA-seq approach and mutagenesis
Jordane Despres, Evelyne Forano, Pascale Lepercq, Sophie Comtet-Marre, Grégory Jubelin, Carl J. Yeoman, Margret E. Berg Miller, Christopher J. Fields, Nicolas Terrapon, Carine Le Bourvellec, Catherine M. G. C. Renard, Bernard Henrissat, Bryan A. White, Pascale Mosoni
BMC Genomics 17:147 (2016)10.1186/s12864-016-2472-1
Globally distributed root endophyte Phialocephala subalpina links pathogenic and saprophytic lifestyles
Markus Schlegel, Martin Munsterktter, Ulrich Guldener, Remy Bruggmann, Angelo Duo, Matthieu Hainaut, Bernard Henrissat, Christian M. K. Sieber, Dirk Hoffmeister, Christoph R. Grunig
BMC Genomics 17:1015 (2016)10.1186/s12864-016-3369-8
Single-domain flavoenzymes trigger lytic polysaccharide monooxygenases for oxidative degradation of cellulose
Sona Garajova, Yann Mathieu, Maria Rosa Beccia, Chloé Bennati-Granier, Frédéric Biaso, Mathieu Fanuel, David D. Ropartz, Bruno Guigliarelli, Eric Record, Helene H. Rogniaux-Bonaventure, Bernard Henrissat, Jean-Guy J.-G. Berrin
Scientific Reports 6:Article number: 28276 (2016)10.1038/srep28276
Ectomycorrhizal fungi decompose soil organic matter using oxidative mechanisms adapted from saprotrophic ancestors
Firoz Shah, Cesar Nicolas, Johan Bentzer, Magnus Ellstrom, Mark Smits, Francois Rineau, Bjorn Canback, Dimitrios Floudas, Robert Carleer, Gerald Lackner, Jana Braesel, Dirk Hoffmeister, Bernard Henrissat, Dag Ahren, Tomas Johansson, David S. Hibbett, Francis Martin, Per Persson, Anders Tunlid
New Phytologist 209:1705-1719 (2016)10.1111/nph.13722
Chemical diversity and antiviral potential in the pantropical Diospyros genus
Laure-Anne Peyrat, Véronique Eparvier, Cécilia Eydoux, Jean-Claude Guillemot, Didier Stien, Marc Litaudon
Fitoterapia (2016)10.1016/j.fitote.2016.04.017
Draft Genome Sequence of the Deep-Sea Ascomycetous Filamentous Fungus Cadophora malorum Mo12 from the Mid-Atlantic Ridge Reveals Its Biotechnological Potential
Rédou V, Kumar A, Matthieu Hainaut, Bernard Henrissat, Record E, Barbier G, Burgaud G.
Genome Announcements 4:e00467-16 (2016)10.1128/genomeA.00467-16
Visual comparative omics of fungi for plant biomass deconstruction
Shingo Miyauchi, David Navarro, Igor V. Grigoriev, Anna Lipzen, Robert Riley, Didier Chevret, Sacha Grisel, Jean-Guy Berrin, Bernard Henrissat, Marie-Noëlle Rosso
Frontiers in Microbiology 7:1335 (2016)10.3389/fmicb.2016.01335
The Hybrid Histidine Kinase LadS Forms a Multicomponent Signal Transduction System with the GacS/GacA Two-Component System in Pseudomonas aeruginosa
Gaël Chambonnier, Lorène Roux, David Redelberger, Firas Fadel, Alain Filloux, Melissa Sivaneson, Sophie de Bentzmann, Christophe Bordi
PLoS Genetics 12:e1006032 (2016)10.1371/journal.pgen.1006032
Composting-Like Conditions Are More Efficient for Enrichment and Diversity of Organisms Containing Cellulase-Encoding Genes than Submerged Cultures
Senta Heiss-Blanquet, Francoise M Fayolle-Guichard, Vincent Lombard, Agnès M Hébert, Pedro M Coutinho, Alexis Groppi, Aurélien Barré, Bernard Henrissat
PLoS ONE 11:497-497 (2016)10.1371/journal.pone.0167216
The Atomic Structure of the Phage Tuc2009 Baseplate Tripod Suggests that Host Recognition Involves Two Different Carbohydrate Binding Modules
Pierre Legrand, Barry Collins, Stephanie Blangy, James Murphy, Silvia Spinelli, Carlos Gutierrez, Nicolas Richet, Christine Kellenberger, Aline Desmyter, Jennifer Mahony, Douwe Van Sinderen, Christian Cambillau
mBio 7 (2016)10.1128/mBio.01781-15
Involvement of an Arginine Triplet in M1 Matrix Protein Interaction with Membranes and in M1 Recruitment into Virus-Like Particles of the Influenza A(H1N1)pdm09 Virus
Adeline Kerviel, Shantoshini Dash, Olivier Moncorgé, Baptiste Panthu, Jan Prchal, Didier Decimo, Théophile Ohlmann, Bruno Lina, Cyril Favard, Etienne Decroly, Michèle Ottmann, Philippe Roingeard, Delphine Muriaux
PLoS ONE 11:e0165421 (2016)10.1371/journal.pone.0165421
The viral capping enzyme nsP1: a novel target for the inhibition of chikungunya virus infection
L. Delang, C. Li, A. Tas, G. Querat, I. C. Albulescu, T. de Burghgraeve, N. A. Segura Guerrero, A. Gigante, G. Piorkowski, Etienne Decroly, D. Jochmans, B. Canard, E. J. Snijder, M. J. Perez-Perez, M. J. Van Hemert, B. Coutard, P. Leyssen, J. Neyts
Scientific Reports 6:31819 (2016)10.1038/srep31819
Increased Gut Redox and Depletion of Anaerobic and Methanogenic Prokaryotes in Severe Acute Malnutrition
Matthieu Million, Maryam Tidjani Alou, Saber Khelaifia, Dipankar Bachar, Jean-Christophe J.-C. Lagier, Niokhor Dione, Souleymane Brah, Perrine Hugon, Vincent Lombard, Fabrice Armougom, Julien Fromonot, Catherine Robert, Caroline Michelle, Aldiouma Diallo, Alexandre Fabre, Régis Guieu, Cheikh Sokhna, Bernard Henrissat, Philippe Parola, Didier Raoult
Scientific Reports 6:26051 (2016)10.1038/srep26051
Mechanisms involved in xyloglucan catabolism by the cellulosome-producing bacterium Ruminiclostridium cellulolyticum
Julie Ravachol, Pascale De Philip, Romain Borne, Pascal Mansuelle, Maria J. Maté, Stéphanie Perret, Henri-Pierre Fierobe
Scientific Reports 6:22770 (2016)10.1038/srep22770
Comparative genomic analysis of Drechmeria coniospora reveals core and specific genetic requirements for fungal endoparisitism of nematodes
Lebrigand K., He L.D., Thakur N., Arguel M.J., Polanowska J., Bernard Henrissat, Record E., Ghislaine Magdelenat, Valérie Barbe, Raffaele S., Barbry P., Ewbank J.J
PLoS Genetics 12 (2016)10.1371/journal.pgen.1006017
Structure of the host-recognition device of Staphylococcus aureus phage phi 11
Cengiz Koç, Guoqing Xia, Petra Kuehner, Silvia Spinelli, Alain Roussel, Christian Cambillau, Thilo Stehle
Scientific Reports 6 (2016)10.1038/srep27581
The genome of Xylona heveae provides a window into fungal endophytism
Romina Gazis, Alan Kuo, Robert Riley, Kurt Labutti, Anna Lipzen, Junyan Lin, Mojgan Amirebrahimi, Cedar N. Hesse, Joseph W. Spatafora, Bernard Henrissat, Matthieu Hainaut, Igor V. Grigoriev, David S. Hibbett
Fungal Biology 120:26-42 (2016)10.1016/j.funbio.2015.10.002
Cytokine Diedel and a viral homologue suppress the IMD pathway in Drosophila
Olivier Lamiable, Christine Kellenberger, Cordula Kemp, Laurent Troxler, Nadege Pelte, Michael Boutros, Joao Trindade Marques, Laurent Daeffler, Jules A. Hoffmann, Alain Roussel, Jean-Luc Imler
Proceedings of the National Academy of Sciences of the United States of America 113:698-703 (2016)10.1073/pnas.1516122113
Assessing the dynamic stiffness of piled-raft foundations by means of a multiphase model
Viet Tuan Nguyen, Ghazi Hassen, Patrick de Buhan
Computers and Geotechnics 71:124-135 (2016)10.1016/j.compgeo.2015.08.014
Genome Assembly of the Fungus Cochliobolus miyabeanus, and Transcriptome Analysis during Early Stages of Infection on American Wildrice (Zizania palustris L.)
Claudia V. Castell-Miller, Juan J. Gutierrez-Gonzalez, Zheng Jin Tu, Kathryn E. Bushley, Matthieu Hainaut, Bernard Henrissat, Deborah A. Samac
PLoS ONE 11:e0154122 (2016)10.1371/journal.pone.0154122
Characterization of a new aryl-alcohol oxidase secreted by the phytopathogenic fungus Ustilago maydis.
Couturier M, Mathieu Y, Li A, Navarro D, Drula E, Haon M, Grisel S, Ludwig R, Berrin Jg
Applied Microbiology and Biotechnology 100:697-706 (2016)10.1007/s00253-015-7021-3
Draft Genome Sequence of the Deep-Sea Basidiomycetous Yeast Cryptococcus sp. Strain Mo29 Reveals Its Biotechnological Potential.
Rédou V, Kumar A, Hainaut M, Bernard Henrissat, Record E, Barbier G, Burgaud G.
Genome Announcements 4:e00461-16 (2016)10.1128/genomeA.00461-16
Fungal secretomics of ascomycete fungi for biotechnological applications
Marie Couturier, David Navarro, Anne Favel, Mireille Haon, C. Lechat, Laurence Lesage-Meessen, Didier Chevret, Vincent Lombard, Bernard Henrissat, Jean-Guy Berrin
Mycosphere Journal 7:1546-1553 (2016)10.5943/mycosphere/si/3b/6
Comparative Analysis of Secretome Profiles of Manganese(II)-Oxidizing Ascomycete Fungi
Carolyn A. Zeiner, Samuel O. Purvine, Erika M. Zink, Ljiljana Pasa-Tolic, Dominique L. Chaput, Sajeet Haridas, Si Wu, Kurt Labutti, Igor V. Grigoriev, Bernard Henrissat, Cara M. Santelli, Colleen M. Hansel
PLoS ONE 11:e0157844 (2016)10.1371/journal.pone.0157844
The Quaternary Structure of a Glycoside Hydrolase Dictates Specificity toward β-Glucans
Mickael Lafond, Gerlind Sulzenbacher, Thibaud Freyd, Bernard Henrissat, Jean-Guy Berrin, Marie-Line Garron
Journal of Biological Chemistry 291:7183-7194 (2016)10.1074/jbc.M115.695999
