Pedro MALDONADO COUTINHO

Latest Publications

1. The chimeric nature of the genomes of marine magnetotactic coccoid-ovoid bacteria defines a novel group of Proteobacteria. (2017)
   Ji B, Zhang SD, Zhang WJ, Rouy Z, Alberto F, Santini CL, Mangenot S, Gagnot S, Philippe N, Pradel N, Zhang L, Tempel S, Li Y, Medigue C, Henrissat B, Coutinho P M, Barbe V, Talla E, Wu LF
   Environ Microbiol 19 1103-1119
2. Composting-Like Conditions Are More Efficient for Enrichment and Diversity of Organisms Containing Cellulase-Encoding Genes than Submerged Cultures. (2016)
   Heiss-Blanquet S, Fayolle-Guichard F, Lombard V, Hebert A, Coutinho P M, Groppi A, Barre A, Henrissat B
   PLoS One 11 e0167216
3. Complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition. (2016)
   Venditto I, Luis AS, Rydahl M, Schuckel J, Fernandes VO, Vidal-Melgosa S, Bule P, Goyal A, Pires VM, Dourado CG, Ferreira LM, Coutinho P M, Henrissat B, Knox JP, Basle A, Najmudin S, Gilbert HJ, Willats WG, Fontes CM
   Proc Natl Acad Sci U S A 113 7136-7141
4. Closely related fungi employ diverse enzymatic strategies to degrade plant biomass. (2015)
   Benoit I, Culleton H, Zhou M, DiFalco M, Aguilar-Osorio G, Battaglia E, Bouzid O, Brouwer CP, El-Bushari HB, Coutinho P M, Gruben BS, Hilden KS, Houbraken J, Barboza LA, Levasseur A, Majoor E, Makela MR, Narang HM, Trejo-Aguilar B, van den Brink J, vanKuyk PA, Wiebenga A, McKie V, McCleary B, Tsang A, Henrissat B, de Vries RP
   Biotechnol Biofuels 8 107
5. Fast solubilization of recalcitrant cellulosic biomass by the basidiomycete fungus Laetisaria arvalis involves successive secretion of oxidative and hydrolytic enzymes. (2014)
   Navarro D, Rosso MN, Haon M, Olive C, Bonnin E, Lesage-Meessen L, Chevret D, Coutinho P M, Henrissat B, Berrin JG
   Biotechnol Biofuels 7 143
6. Carbohydrate-related enzymes of important Phytophthora plant pathogens. (2014)
   Brouwer H, Coutinho P M, Henrissat B, de Vries RP
   Fungal Genet Biol 72 192-200
7. Genomic and transcriptomic analysis of Laccaria bicolor CAZome reveals insights into polysaccharides remodelling during symbiosis establishment. (2014)
   Veneault-Fourrey C, Commun C, Kohler A, Morin E, Balestrini R, Plett J, Danchin E, Coutinho P , Wiebenga A, de Vries RP, Henrissat B, Martin F
   Fungal Genet Biol 72 168-181
8. Rumen cellulosomics: divergent fiber-degrading strategies revealed by comparative genome-wide analysis of six ruminococcal strains. (2014)
   Dassa B, Borovok I, Ruimy-Israeli V, Lamed R, Flint HJ, Duncan SH, Henrissat B, Coutinho P , Morrison M, Mosoni P, Yeoman CJ, White BA, Bayer EA
   PLoS One 9 e99221
9. The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown. (2014)
   Levasseur A, Lomascolo A, Chabrol O, Ruiz-Duenas FJ, Boukhris-Uzan E, Piumi F, Kues U, Ram AF, Murat C, Haon M, Benoit I, Arfi Y, Chevret D, Drula E, Kwon MJ, Gouret P, Lesage-Meessen L, Lombard V, Mariette J, Noirot C, Park J, Patyshakuliyeva A, Sigoillot JC, Wiebenga A, Wosten HA, Martin F, Coutinho P M, de Vries RP, Martinez AT, Klopp C, Pontarotti P, Henrissat B, Record E
   BMC Genomics 15 486
10. Comparative analyses of Podospora anserina secretomes reveal a large array of lignocellulose-active enzymes. (2014)
    Poidevin L, Berrin JG, Bennati-Granier C, Levasseur A, Herpoel-Gimbert I, Chevret D, Coutinho P M, Henrissat B, Heiss-Blanquet S, Record E
    Appl Microbiol Biotechnol 98 7457-7469
11. A novel unsaturated beta-glucuronyl hydrolase involved in ulvan degradation unveils the versatility of stereochemistry requirements in family GH105. (2014)
    Nyvall-Collen P, Jeudy A, Sassi JF, Groisillier A, Czjzek M, Coutinho P M, Helbert W
    J Biol Chem 289 6199-211
12. First structural insights into alpha-L-arabinofuranosidases from the two GH62 glycoside hydrolase subfamilies. (2014)
    Siguier B, Haon M, Nahoum V, Marcellin M, Burlet-Schiltz O, Coutinho P M, Henrissat B, Mourey L, O Donohue MJ, Berrin JG, Tranier S, Dumon C
    J Biol Chem 289 5261-73
13. The carbohydrate-active enzymes database (CAZy) in 2013. (2014)
    Lombard V, Golaconda Ramulu H, Drula E, Coutinho P M, Henrissat B
    Nucleic Acids Res 42 D490-5
14. Comparative genomic analysis provides insights into the evolution and niche adaptation of marine Magnetospira sp. QH-2 strain. (2014)
    Ji B, Zhang SD, Arnoux P, Rouy Z, Alberto F, Philippe N, Murat D, Zhang WJ, Rioux JB, Ginet N, Sabaty M, Mangenot S, Pradel N, Tian J, Yang J, Zhang L, Zhang W, Pan H, Henrissat B, Coutinho P M, Li Y, Xiao T, Medigue C, Barbe V, Pignol D, Talla E, Wu LF
    Environ Microbiol 16 525-44
15. Multiple rewards from a treasure trove of novel glycoside hydrolase and polysaccharide lyase structures: new folds, mechanistic details, and evolutionary relationships. (2013)
    Fushinobu S, Alves VD, Coutinho P M
    Curr Opin Struct Biol 23 652-9